RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 ARMCX3Q9UH62 379 aaPredicted RBP4.85□□□□□ -1.63
CLIP1-207ENST00000536634 STAP1Q9ULZ2 295 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 SLC17A4Q9Y2C5 497 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 ZANQ9Y493 2812 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 ANK3Q12955 4377 aaKnown RBP4.85□□□□□ -1.63
CLIP1-207ENST00000536634 MXRA5Q9NR99 2828 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 PRRC2AP48634 2157 aaKnown RBP4.84□□□□□ -1.63
CLIP1-207ENST00000536634 DOCK10Q96BY6 2186 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 CCDC88CQ9P219 2028 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 A0A0U1RQS6 177 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 HEATR9A2RTY3 570 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 OR2M5A3KFT3 312 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 MYO1GB0I1T2 1018 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 BUD23O43709 281 aaKnown RBP4.84□□□□□ -1.63
CLIP1-207ENST00000536634 C9P02748 559 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 TFAP2AP05549 437 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 LIPFP07098 398 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 IVLP07476 585 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 PLEKP08567 350 aaPredicted RBP4.84□□□□□ -1.63
CLIP1-207ENST00000536634 TMEM11P17152 192 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 LHCGRP22888 699 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 ITGA3P26006 1051 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 PTGER4P35408 488 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 NDUFA8P51970 172 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 PPP1CAP62136 330 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 FKBP3Q00688 224 aaKnown RBP4.84□□□□□ -1.63
CLIP1-207ENST00000536634 PYCR3Q53H96 274 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 C2CD6Q53TS8 623 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 CFAP58Q5T655 872 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 PWWP2BQ6NUJ5 590 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 RFLNAQ6ZTI6 216 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 ZNF534Q76KX8 674 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 MAATS1Q7Z4T9 603 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 HSD11B1LQ7Z5J1 315 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 TBC1D1Q86TI0 1168 aaPredicted RBP4.84□□□□□ -1.63
CLIP1-207ENST00000536634 SYVN1Q86TM6 617 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 DNAAF5Q86Y56 855 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 STPG4Q8N801 248 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 ST6GALNAC3Q8NDV1 305 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 HCAR2Q8TDS4 363 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 FCAMRQ8WWV6 532 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 TM9SF4Q92544 642 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 ECHDC3Q96DC8 303 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 NUS1Q96E22 293 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 ZNF641Q96N77 438 aaPredicted RBP4.84□□□□□ -1.63
CLIP1-207ENST00000536634 TGM7Q96PF1 710 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 DUX3Q96PT4 197 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 OR2M4Q96R27 311 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 F2RL3Q96RI0 385 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 SRSF8Q9BRL6 282 aaKnown RBP4.84□□□□□ -1.63
CLIP1-207ENST00000536634 RAD21L1Q9H4I0 556 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 PDFQ9HBH1 243 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 ZBTB20Q9HC78 741 aaPredicted RBP4.84□□□□□ -1.63
CLIP1-207ENST00000536634 UBE2TQ9NPD8 197 aaPredicted RBP4.84□□□□□ -1.63
CLIP1-207ENST00000536634 SEPT11Q9NVA2 429 aaKnown RBP4.84□□□□□ -1.63
CLIP1-207ENST00000536634 TRMT1Q9NXH9 659 aaKnown RBP4.84□□□□□ -1.63
CLIP1-207ENST00000536634 GPR83Q9NYM4 423 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 RCC2Q9P258 522 aaKnown RBP4.84□□□□□ -1.63
CLIP1-207ENST00000536634 TBC1D29Q9UFV1 150 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 OR12D3Q9UGF7 316 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 PRDM4Q9UKN5 801 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 HPCAL4Q9UM19 191 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 CSAG2Q9Y5P2 127 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 SESN1Q9Y6P5 492 aa4.84□□□□□ -1.63
CLIP1-207ENST00000536634 TLN2Q9Y4G6 2542 aa4.84□□□□□ -1.64
CLIP1-207ENST00000536634 FN1P02751 2386 aaKnown RBP4.84□□□□□ -1.64
CLIP1-207ENST00000536634 RTTNQ86VV8 2226 aa4.83□□□□□ -1.64
CLIP1-207ENST00000536634 F5H0A9 414 aaPredicted RBP4.83□□□□□ -1.64
CLIP1-207ENST00000536634 GOLGA8SH3BPF8 625 aa4.83□□□□□ -1.64
CLIP1-207ENST00000536634 TRAFD1O14545 582 aaPredicted RBP4.83□□□□□ -1.64
CLIP1-207ENST00000536634 HS6ST1O60243 411 aa4.83□□□□□ -1.64
CLIP1-207ENST00000536634 GPC4O75487 556 aa4.83□□□□□ -1.64
CLIP1-207ENST00000536634 TPPPO94811 219 aa4.83□□□□□ -1.64
CLIP1-207ENST00000536634 BMP10O95393 424 aa4.83□□□□□ -1.64
CLIP1-207ENST00000536634 APOHP02749 345 aaPredicted RBP4.83□□□□□ -1.64
CLIP1-207ENST00000536634 PATE4P0C8F1 98 aa4.83□□□□□ -1.64
CLIP1-207ENST00000536634 PNMA6AP0CW24 399 aaPredicted RBP4.83□□□□□ -1.64
CLIP1-207ENST00000536634 MSH3P20585 1137 aa4.83□□□□□ -1.64
CLIP1-207ENST00000536634 CA5AP35218 305 aa4.83□□□□□ -1.64
CLIP1-207ENST00000536634 MMP15P51511 669 aa4.83□□□□□ -1.64
CLIP1-207ENST00000536634 UBE2IP63279 158 aaKnown RBP4.83□□□□□ -1.64
CLIP1-207ENST00000536634 PRAMEP78395 509 aa4.83□□□□□ -1.64
CLIP1-207ENST00000536634 IL11RAQ14626 422 aa4.83□□□□□ -1.64
CLIP1-207ENST00000536634 MEP1AQ16819 746 aa4.83□□□□□ -1.64
CLIP1-207ENST00000536634 C15orf59Q2T9L4 293 aaPredicted RBP4.83□□□□□ -1.64
CLIP1-207ENST00000536634 TECRLQ5HYJ1 363 aa4.83□□□□□ -1.64
CLIP1-207ENST00000536634 CEP85LQ5SZL2 805 aa4.83□□□□□ -1.64
CLIP1-207ENST00000536634 RAET1GQ6H3X3 334 aa4.83□□□□□ -1.64
CLIP1-207ENST00000536634 IYDQ6PHW0 289 aa4.83□□□□□ -1.64
CLIP1-207ENST00000536634 PACS1Q6VY07 963 aa4.83□□□□□ -1.64
CLIP1-207ENST00000536634 CERS6Q6ZMG9 384 aa4.83□□□□□ -1.64
CLIP1-207ENST00000536634 KCNMB4Q86W47 210 aa4.83□□□□□ -1.64
CLIP1-207ENST00000536634 GALNT13Q8IUC8 556 aa4.83□□□□□ -1.64
CLIP1-207ENST00000536634 PYROXD2Q8N2H3 581 aa4.83□□□□□ -1.64
CLIP1-207ENST00000536634 CCDC185Q8N715 623 aa4.83□□□□□ -1.64
CLIP1-207ENST00000536634 FAM76AQ8TAV0 307 aa4.83□□□□□ -1.64
CLIP1-207ENST00000536634 ITLN2Q8WWU7 325 aaPredicted RBP4.83□□□□□ -1.64
CLIP1-207ENST00000536634 TBC1D31Q96DN5 1066 aa4.83□□□□□ -1.64
CLIP1-207ENST00000536634 DTD2Q96FN9 168 aa4.83□□□□□ -1.64
CLIP1-207ENST00000536634 NUDCD1Q96RS6 583 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms