RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 PLOD3O60568 738 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 MAN2A2P49641 1150 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 CRISP1P54107 249 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 PCBP4P57723 403 aaKnown RBP16.9■□□□□ 0.3
RAB40C-203ENST00000535977 CDK3Q00526 305 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 CAMK1Q14012 370 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 PTGES3Q15185 160 aaKnown RBP16.9■□□□□ 0.3
RAB40C-203ENST00000535977 FRMPD2BQ6IN97 320 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 ADGRG3Q86Y34 549 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 AQP11Q8NBQ7 271 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 OR9Q2Q8NGE9 314 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 SLC38A5Q8WUX1 472 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 TEFMQ96QE5 360 aaKnown RBP16.9■□□□□ 0.3
RAB40C-203ENST00000535977 CDCA4Q9BXL8 241 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 RACGAP1Q9H0H5 632 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 RBFOX1Q9NWB1 397 aaKnown RBP16.9■□□□□ 0.3
RAB40C-203ENST00000535977 MS4A12Q9NXJ0 267 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 TAS2R7Q9NYW3 318 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 CPNE7Q9UBL6 633 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 MGAT4AQ9UM21 535 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 PLAGL1Q9UM63 463 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 MGAT4BQ9UQ53 548 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 CFAP20Q9Y6A4 193 aaKnown RBP16.9■□□□□ 0.3
RAB40C-203ENST00000535977 IQCMA0A1B0GVH7 501 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 A0A1W2PQL4 384 aaPredicted RBP16.9■□□□□ 0.3
RAB40C-203ENST00000535977 J3KTA2 159 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 PROM1O43490 865 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 SH3BP5O60239 455 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 TEAD1P28347 426 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 MESP2Q0VG99 397 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 GNA13Q14344 377 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 GPR139Q6DWJ6 353 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 PSRC1Q6PGN9 363 aaPredicted RBP16.9■□□□□ 0.3
RAB40C-203ENST00000535977 PLA2G15Q8NCC3 412 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 SMARCD2Q92925 531 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 ASB16Q96NS5 453 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 OPALINQ96PE5 141 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 F2RL3Q96RI0 385 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 OR5K4A6NMS3 321 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 TPOP07202 933 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 DRD2P14416 443 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 SOX3P41225 446 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 CLCNKAP51800 687 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 CLDN20P56880 219 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.9■□□□□ 0.3
RAB40C-203ENST00000535977 SPDYE7PQ495Y7 208 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 CYP27C1Q4G0S4 372 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 FAM78AQ5JUQ0 283 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 TMEM240Q5SV17 173 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 C6orf120Q7Z4R8 191 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 ADGRF3Q8IZF5 1079 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 HORMAD2Q8N7B1 307 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 FAM46DQ8NEK8 389 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 APOBEC4Q8WW27 367 aaKnown RBP16.9■□□□□ 0.3
RAB40C-203ENST00000535977 KLHL6Q8WZ60 621 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 SORBS1Q9BX66 1292 aaKnown RBP16.9■□□□□ 0.3
RAB40C-203ENST00000535977 HHATLQ9HCP6 504 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 SLC23A2Q9UGH3 650 aa16.9■□□□□ 0.3
RAB40C-203ENST00000535977 MUC22E2RYF6 1773 aaPredicted RBP16.9■□□□□ 0.3
RAB40C-203ENST00000535977 KIF26AQ9ULI4 1882 aaPredicted RBP16.89■□□□□ 0.29
RAB40C-203ENST00000535977 TCF20Q9UGU0 1960 aaKnown RBP16.89■□□□□ 0.29
RAB40C-203ENST00000535977 FAM240BA0A1B0GVZ2 78 aa16.89■□□□□ 0.29
RAB40C-203ENST00000535977 LINC01553A4QN01 128 aa16.89■□□□□ 0.29
RAB40C-203ENST00000535977 TBC1D3BA6NDS4 549 aa16.89■□□□□ 0.29
RAB40C-203ENST00000535977 TBX6O95947 436 aaPredicted RBP16.89■□□□□ 0.29
RAB40C-203ENST00000535977 SLC35G4P0C7Q5 338 aa16.89■□□□□ 0.29
RAB40C-203ENST00000535977 RRASP10301 218 aa16.89■□□□□ 0.29
RAB40C-203ENST00000535977 RAB25P57735 213 aa16.89■□□□□ 0.29
RAB40C-203ENST00000535977 AGERQ15109 404 aa16.89■□□□□ 0.29
RAB40C-203ENST00000535977 CLLU1Q5K131 121 aa16.89■□□□□ 0.29
RAB40C-203ENST00000535977 ZNF770Q6IQ21 691 aaPredicted RBP16.89■□□□□ 0.29
RAB40C-203ENST00000535977 LURAP1LQ8IV03 231 aa16.89■□□□□ 0.29
RAB40C-203ENST00000535977 C2orf73Q8N5S3 287 aaPredicted RBP16.89■□□□□ 0.29
RAB40C-203ENST00000535977 DUSP18Q8NEJ0 188 aa16.89■□□□□ 0.29
RAB40C-203ENST00000535977 ST8SIA2Q92186 375 aa16.89■□□□□ 0.29
RAB40C-203ENST00000535977 USB1Q9BQ65 265 aaKnown RBP16.89■□□□□ 0.29
RAB40C-203ENST00000535977 DDX31Q9H8H2 851 aaKnown RBP16.89■□□□□ 0.29
RAB40C-203ENST00000535977 NMNAT1Q9HAN9 279 aaPredicted RBP16.89■□□□□ 0.29
RAB40C-203ENST00000535977 THAP10Q9P2Z0 257 aaPredicted RBP16.89■□□□□ 0.29
RAB40C-203ENST00000535977 FTSJ1Q9UET6 329 aa16.89■□□□□ 0.29
RAB40C-203ENST00000535977 GMEB2Q9UKD1 530 aa16.89■□□□□ 0.29
RAB40C-203ENST00000535977 FAM157BP0CG42 384 aa16.89■□□□□ 0.29
RAB40C-203ENST00000535977 PIPP12273 146 aaPredicted RBP16.89■□□□□ 0.29
RAB40C-203ENST00000535977 GBX2P52951 348 aaPredicted RBP16.89■□□□□ 0.29
RAB40C-203ENST00000535977 PTCHD4Q6ZW05 846 aa16.89■□□□□ 0.29
RAB40C-203ENST00000535977 ATP6V1C2Q8NEY4 427 aa16.89■□□□□ 0.29
RAB40C-203ENST00000535977 OR8K5Q8NH50 307 aa16.89■□□□□ 0.29
RAB40C-203ENST00000535977 WDR36Q8NI36 951 aaKnown RBP16.89■□□□□ 0.29
RAB40C-203ENST00000535977 RBPMSQ93062 196 aaKnown RBP16.89■□□□□ 0.29
RAB40C-203ENST00000535977 GTPBP3Q969Y2 492 aaKnown RBP16.89■□□□□ 0.29
RAB40C-203ENST00000535977 ZC3HAV1LQ96H79 300 aaKnown RBP16.89■□□□□ 0.29
RAB40C-203ENST00000535977 DPCDQ9BVM2 203 aaPredicted RBP16.89■□□□□ 0.29
RAB40C-203ENST00000535977 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.89■□□□□ 0.29
RAB40C-203ENST00000535977 PRSS16Q9NQE7 514 aa16.89■□□□□ 0.29
RAB40C-203ENST00000535977 PRKAB1Q9Y478 270 aa16.89■□□□□ 0.29
RAB40C-203ENST00000535977 ARPC4-TTLL3A0A0A6YYG9 625 aa16.88■□□□□ 0.29
RAB40C-203ENST00000535977 FAAHO00519 579 aa16.88■□□□□ 0.29
RAB40C-203ENST00000535977 CLEC3AO75596 197 aa16.88■□□□□ 0.29
RAB40C-203ENST00000535977 GASTP01350 101 aa16.88■□□□□ 0.29
RAB40C-203ENST00000535977 BCHEP06276 602 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms