RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 HCRTR1O43613 425 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 FOXS1O43638 330 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 SDC3O75056 442 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 DNAJB6O75190 326 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 STX11O75558 287 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 DBIP07108 87 aaKnown RBP12.51□□□□□ -0.41
BEST1-208ENST00000534553 OSMP13725 252 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 GSTM3P21266 225 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 AGXTP21549 392 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 DCKP27707 260 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 SLC35A2P78381 396 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 HSD11B2P80365 405 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 ST3GAL3Q11203 375 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 ILKQ13418 452 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 SERTAD2Q14140 314 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 RAB39AQ14964 217 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 DUSP5Q16690 384 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 TRMT12Q53H54 448 aaKnown RBP12.51□□□□□ -0.41
BEST1-208ENST00000534553 MED25Q71SY5 747 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 WDR5BQ86VZ2 330 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 ENTHD1Q8IYW4 607 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 ZNF619Q8N2I2 560 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 GALNT15Q8N3T1 639 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 COX18Q8N8Q8 333 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 TMEM52Q8NDY8 209 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 OR4D11Q8NGI4 311 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 OR6T1Q8NGN1 323 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 OR13F1Q8NGS4 319 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 ZFAND2BQ8WV99 257 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 SLC38A4Q969I6 547 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 OTUB1Q96FW1 271 aaPredicted RBP12.51□□□□□ -0.41
BEST1-208ENST00000534553 RBM18Q96H35 190 aaKnown RBP12.51□□□□□ -0.41
BEST1-208ENST00000534553 SDF2Q99470 211 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 DUSP23Q9BVJ7 150 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 ADAP2Q9NPF8 381 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 IRAK4Q9NWZ3 460 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 UCKL1Q9NWZ5 548 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 SEMA5BQ9P283 1151 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 IGHV1OR21-1A0A087WYE8 117 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 SYNDIG1LA6NDD5 238 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 M0R3H8 397 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 B4GAT1O43505 415 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 SEMA7AO75326 666 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 GASTP01350 101 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 ACP2P11117 423 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 ALDH4A1P30038 563 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 MAP3K8P41279 467 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 ARL4DP49703 201 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 PDX1P52945 283 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 CRISP1P54107 249 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 GFERP55789 205 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 ALDH6A1Q02252 535 aaKnown RBP12.51□□□□□ -0.41
BEST1-208ENST00000534553 MGAT2Q10469 447 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 SLC13A2Q13183 592 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 PMS2P3Q13401 168 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 NEDD8Q15843 81 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 ZSWIM7Q19AV6 140 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 DCST2Q5T1A1 773 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 YOD1Q5VVQ6 348 aaPredicted RBP12.51□□□□□ -0.41
BEST1-208ENST00000534553 TYW3Q6IPR3 259 aaKnown RBP12.51□□□□□ -0.41
BEST1-208ENST00000534553 KLHL17Q6TDP4 642 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 ZNF540Q8NDQ6 660 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 RHOXF1Q8NHV9 184 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 FAM81AQ8TBF8 368 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 SLC7A13Q8TCU3 470 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 NMD3Q96D46 503 aaKnown RBP12.51□□□□□ -0.41
BEST1-208ENST00000534553 RSPO3Q9BXY4 272 aaPredicted RBP12.51□□□□□ -0.41
BEST1-208ENST00000534553 TMEM74BQ9NUR3 256 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 RHCGQ9UBD6 479 aa12.51□□□□□ -0.41
BEST1-208ENST00000534553 ZNF443Q9Y2A4 671 aaPredicted RBP12.51□□□□□ -0.41
BEST1-208ENST00000534553 MN1Q10571 1320 aaPredicted RBP12.5□□□□□ -0.41
BEST1-208ENST00000534553 CACNA1IQ9P0X4 2223 aa12.5□□□□□ -0.41
BEST1-208ENST00000534553 IGHV5-51A0A0C4DH38 117 aa12.5□□□□□ -0.41
BEST1-208ENST00000534553 SH3D21A4FU49 640 aa12.5□□□□□ -0.41
BEST1-208ENST00000534553 AGAP5A6NIR3 686 aa12.5□□□□□ -0.41
BEST1-208ENST00000534553 ZAR1LA6NP61 321 aa12.5□□□□□ -0.41
BEST1-208ENST00000534553 TOX3O15405 576 aaPredicted RBP12.5□□□□□ -0.41
BEST1-208ENST00000534553 YKT6O15498 198 aa12.5□□□□□ -0.41
BEST1-208ENST00000534553 PCDHGA12O60330 932 aa12.5□□□□□ -0.41
BEST1-208ENST00000534553 FAM20BO75063 409 aa12.5□□□□□ -0.41
BEST1-208ENST00000534553 NME6O75414 186 aaPredicted RBP12.5□□□□□ -0.41
BEST1-208ENST00000534553 SEC14L2O76054 403 aa12.5□□□□□ -0.41
BEST1-208ENST00000534553 NKX2-2O95096 273 aa12.5□□□□□ -0.41
BEST1-208ENST00000534553 EPPINO95925 133 aa12.5□□□□□ -0.41
BEST1-208ENST00000534553 CCNYL3P0C7X3 344 aa12.5□□□□□ -0.41
BEST1-208ENST00000534553 PNLIPP16233 465 aa12.5□□□□□ -0.41
BEST1-208ENST00000534553 RPS4Y1P22090 263 aaKnown RBP12.5□□□□□ -0.41
BEST1-208ENST00000534553 EPHA2P29317 976 aa12.5□□□□□ -0.41
BEST1-208ENST00000534553 SOX18P35713 384 aa12.5□□□□□ -0.41
BEST1-208ENST00000534553 FNTBP49356 437 aa12.5□□□□□ -0.41
BEST1-208ENST00000534553 TMBIM6P55061 237 aa12.5□□□□□ -0.41
BEST1-208ENST00000534553 TAS2R41P59536 307 aa12.5□□□□□ -0.41
BEST1-208ENST00000534553 PIN1Q13526 163 aaPredicted RBP12.5□□□□□ -0.41
BEST1-208ENST00000534553 TRAM2Q15035 370 aa12.5□□□□□ -0.41
BEST1-208ENST00000534553 PTGES3Q15185 160 aaKnown RBP12.5□□□□□ -0.41
BEST1-208ENST00000534553 XAF1Q6GPH4 301 aa12.5□□□□□ -0.41
BEST1-208ENST00000534553 WDR74Q6RFH5 385 aaPredicted RBP12.5□□□□□ -0.41
BEST1-208ENST00000534553 PRSS48Q7RTY5 328 aa12.5□□□□□ -0.41
BEST1-208ENST00000534553 PRSS42Q7Z5A4 293 aa12.5□□□□□ -0.41
BEST1-208ENST00000534553 RBM45Q8IUH3 476 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms