RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	CUL3	Q13618	768 aa		4.01	□□□□□ -1.77
ECHDC1-223	ENST00000534442	VEZF1	Q14119	521 aa		4.01	□□□□□ -1.77
ECHDC1-223	ENST00000534442	ELOC	Q15369	112 aa		4.01	□□□□□ -1.77
ECHDC1-223	ENST00000534442	CFAP221	Q4G0U5	840 aa		4.01	□□□□□ -1.77
ECHDC1-223	ENST00000534442	FAM199X	Q6PEV8	388 aa	Predicted RBP	4.01	□□□□□ -1.77
ECHDC1-223	ENST00000534442	PACS1	Q6VY07	963 aa		4.01	□□□□□ -1.77
ECHDC1-223	ENST00000534442	GBP6	Q6ZN66	633 aa		4.01	□□□□□ -1.77
ECHDC1-223	ENST00000534442	LINC00696	Q6ZRV3	163 aa		4.01	□□□□□ -1.77
ECHDC1-223	ENST00000534442	PIWIL4	Q7Z3Z4	852 aa	Known RBP	4.01	□□□□□ -1.77
ECHDC1-223	ENST00000534442	PAQR7	Q86WK9	346 aa		4.01	□□□□□ -1.77
ECHDC1-223	ENST00000534442	ZNF575	Q86XF7	245 aa		4.01	□□□□□ -1.77
ECHDC1-223	ENST00000534442	CCDC71	Q8IV32	467 aa	Predicted RBP	4.01	□□□□□ -1.77
ECHDC1-223	ENST00000534442	TMCO5A	Q8N6Q1	288 aa		4.01	□□□□□ -1.77
ECHDC1-223	ENST00000534442	NHLRC2	Q8NBF2	726 aa		4.01	□□□□□ -1.77
ECHDC1-223	ENST00000534442	OR13J1	Q8NGT2	312 aa		4.01	□□□□□ -1.77
ECHDC1-223	ENST00000534442	GRK7	Q8WTQ7	553 aa		4.01	□□□□□ -1.77
ECHDC1-223	ENST00000534442	NEUROG1	Q92886	237 aa		4.01	□□□□□ -1.77
ECHDC1-223	ENST00000534442	FAM131C	Q96AQ9	280 aa		4.01	□□□□□ -1.77
ECHDC1-223	ENST00000534442	ADGRG7	Q96K78	797 aa		4.01	□□□□□ -1.77
ECHDC1-223	ENST00000534442	COL21A1	Q96P44	957 aa		4.01	□□□□□ -1.77
ECHDC1-223	ENST00000534442	SIGLEC12	Q96PQ1	595 aa		4.01	□□□□□ -1.77
ECHDC1-223	ENST00000534442	CCL19	Q99731	98 aa		4.01	□□□□□ -1.77
ECHDC1-223	ENST00000534442	MMADHC	Q9H3L0	296 aa	Predicted RBP	4.01	□□□□□ -1.77
ECHDC1-223	ENST00000534442	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	4.01	□□□□□ -1.77
ECHDC1-223	ENST00000534442	PELI2	Q9HAT8	420 aa		4.01	□□□□□ -1.77
ECHDC1-223	ENST00000534442	CDH20	Q9HBT6	801 aa		4.01	□□□□□ -1.77
ECHDC1-223	ENST00000534442	ZNF701	Q9NV72	531 aa	Predicted RBP	4.01	□□□□□ -1.77
ECHDC1-223	ENST00000534442	MALT1	Q9UDY8	824 aa		4.01	□□□□□ -1.77
ECHDC1-223	ENST00000534442	UBQLN1	Q9UMX0	589 aa	Known RBP	4.01	□□□□□ -1.77
ECHDC1-223	ENST00000534442	LIPT1	Q9Y234	373 aa		4.01	□□□□□ -1.77
ECHDC1-223	ENST00000534442	MUC4	Q99102	2169 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	DNAH9	Q9NYC9	4486 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	UBFD1	O14562	309 aa	Known RBP	4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	GPRIN2	O60269	458 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	MOCS3	O95396	460 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	PPP1R3D	O95685	299 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	VIM	P08670	466 aa	Known RBP	4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	ALPI	P09923	528 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	CCDC166	P0CW27	439 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	SAG	P10523	405 aa	Predicted RBP	4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	MCF2	P10911	925 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	ATP6V1B1	P15313	513 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	ZNF23	P17027	643 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	LBP	P18428	481 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	WNT5A	P41221	380 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	FUT6	P51993	359 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	CASP9	P55211	416 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	DLK1	P80370	383 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	SNTA1	Q13424	505 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	PDIA5	Q14554	519 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	CA9	Q16790	459 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	HNRNPA1L2	Q32P51	320 aa	Known RBP	4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	ANKRD20A4	Q4UJ75	823 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	ANKRD20A8P	Q5CZ79	823 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	ANKRD20A2	Q5SQ80	823 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	ANKRD20A1	Q5TYW2	823 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	ANKRD20A3	Q5VUR7	823 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	WSCD1	Q658N2	575 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	PLBD1	Q6P4A8	553 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	NHLRC1	Q6VVB1	395 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	CREB3L2	Q70SY1	520 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	ARHGAP22	Q7Z5H3	698 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	CCDC91	Q7Z6B0	441 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	HOOK3	Q86VS8	718 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	WDR49	Q8IV35	697 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	MUC20	Q8N307	709 aa	Predicted RBP	4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	MARVELD2	Q8N4S9	558 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	NAT8L	Q8N9F0	302 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	CLEC1A	Q8NC01	280 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	MSANTD4	Q8NCY6	345 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	NPEPL1	Q8NDH3	523 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	VANGL1	Q8TAA9	524 aa	Predicted RBP	4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	FAM222B	Q8WU58	562 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	RAD54L	Q92698	747 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	MRPL24	Q96A35	216 aa	Known RBP	4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	HES6	Q96HZ4	224 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	ZNF479	Q96JC4	524 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	C17orf77	Q96MU5	243 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	CCDC43	Q96MW1	224 aa	Known RBP	4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	TBX15	Q96SF7	602 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	ARMCX3	Q9UH62	379 aa	Predicted RBP	4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	SNX5	Q9Y5X3	404 aa		4	□□□□□ -1.77
ECHDC1-223	ENST00000534442	NYNRIN	Q9P2P1	1898 aa	Known RBP	3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	IGHV4OR15-8	A0A075B7B6	117 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	OOEP	A6NGQ2	149 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442		E9PI62	339 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	GAPDHS	O14556	408 aa	Predicted RBP	3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	CYB561D2	O14569	222 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	SELENOF	O60613	162 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	BAG4	O95429	457 aa	Known RBP	3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	ZBTB11	O95625	1053 aa	Predicted RBP	3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	IGFBP5	P24593	272 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	PSMB4	P28070	264 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	SLC6A6	P31641	620 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	MAGEA11	P43364	429 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	NDST2	P52849	883 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	CLDN15	P56746	228 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	GSDMD	P57764	484 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	DSCR9	P59020	149 aa		3.99	□□□□□ -1.77
ECHDC1-223	ENST00000534442	CX3CL1	P78423	397 aa		3.99	□□□□□ -1.77

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