RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 TMEM81Q6P7N7 255 aa9.6□□□□□ -0.87
CPSF1-203ENST00000527916 GALNT18Q6P9A2 607 aa9.6□□□□□ -0.87
CPSF1-203ENST00000527916 PODNL1Q6PEZ8 512 aa9.6□□□□□ -0.87
CPSF1-203ENST00000527916 TDRPQ86YL5 185 aa9.6□□□□□ -0.87
CPSF1-203ENST00000527916 SAMD14Q8IZD0 417 aaPredicted RBP9.6□□□□□ -0.87
CPSF1-203ENST00000527916 C1orf52Q8N6N3 182 aaKnown RBP9.6□□□□□ -0.87
CPSF1-203ENST00000527916 FAM13CQ8NE31 585 aa9.6□□□□□ -0.87
CPSF1-203ENST00000527916 SPPL2AQ8TCT8 520 aa9.6□□□□□ -0.87
CPSF1-203ENST00000527916 ERP27Q96DN0 273 aa9.6□□□□□ -0.87
CPSF1-203ENST00000527916 C11orf24Q96F05 449 aaPredicted RBP9.6□□□□□ -0.87
CPSF1-203ENST00000527916 PERPQ96FX8 193 aa9.6□□□□□ -0.87
CPSF1-203ENST00000527916 DOCK7Q96N67 2140 aa9.6□□□□□ -0.87
CPSF1-203ENST00000527916 CCL19Q99731 98 aa9.6□□□□□ -0.87
CPSF1-203ENST00000527916 DOHHQ9BU89 302 aa9.6□□□□□ -0.87
CPSF1-203ENST00000527916 RBM24Q9BX46 236 aaKnown RBP9.6□□□□□ -0.87
CPSF1-203ENST00000527916 SHCBP1LQ9BZQ2 653 aa9.6□□□□□ -0.87
CPSF1-203ENST00000527916 SLC6A15Q9H2J7 730 aa9.6□□□□□ -0.87
CPSF1-203ENST00000527916 MAT2BQ9NZL9 334 aa9.6□□□□□ -0.87
CPSF1-203ENST00000527916 NDRG3Q9UGV2 375 aa9.6□□□□□ -0.87
CPSF1-203ENST00000527916 ZNF780BQ9Y6R6 833 aa9.6□□□□□ -0.87
CPSF1-203ENST00000527916 ABCA1O95477 2261 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 A0A1W2PPM1 405 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 A0A1W2PPR1 153 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 LRRC3CA6NJW4 275 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 CD8B2A6NJW9 211 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 G3V2L1 256 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 GOLGA8RI6L899 631 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 TO15178 435 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 ACOX3O15254 700 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 GLRA3O75311 464 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 ERAL1O75616 437 aaKnown RBP9.59□□□□□ -0.87
CPSF1-203ENST00000527916 CNOT4O95628 575 aaKnown RBP9.59□□□□□ -0.87
CPSF1-203ENST00000527916 RFPL3SP0C7P2 107 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 DRD5P21918 477 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 GPX3P22352 226 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 SOX18P35713 384 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 FEN1P39748 380 aaKnown RBP9.59□□□□□ -0.87
CPSF1-203ENST00000527916 CASP3P42574 277 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 PPICP45877 212 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 CPA2P48052 419 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 CCT5P48643 541 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 TRPC1P48995 793 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 WNT3P56703 355 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 SNTA1Q13424 505 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 HEPACAMQ14CZ8 416 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 CCDC153Q494R4 210 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 PRAMEF20Q5VT98 475 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 FAM111BQ6SJ93 734 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 NUP54Q7Z3B4 507 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 HOMEZQ8IX15 550 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 PHC2Q8IXK0 858 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 ZNF675Q8TD23 568 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 DIO2Q92813 273 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 CNRIP1Q96F85 164 aaPredicted RBP9.59□□□□□ -0.87
CPSF1-203ENST00000527916 ZNF597Q96LX8 424 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 JSRP1Q96MG2 331 aaPredicted RBP9.59□□□□□ -0.87
CPSF1-203ENST00000527916 ACPTQ9BZG2 426 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 GSTO2Q9H4Y5 243 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 L2HGDHQ9H9P8 463 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 EHD3Q9NZN3 535 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 JKAMPQ9P055 326 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 PRODH2Q9UF12 536 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 TBK1Q9UHD2 729 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 EMCNQ9ULC0 261 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 GRID1Q9ULK0 1009 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 KIAA1549Q9HCM3 1950 aa9.59□□□□□ -0.87
CPSF1-203ENST00000527916 USF3Q68DE3 2245 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 PCDH7O60245 1069 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 PPM1BO75688 479 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 CBX7O95931 251 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 ABCB1P08183 1280 aaPredicted RBP9.58□□□□□ -0.88
CPSF1-203ENST00000527916 MYL2P10916 166 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 CHN1P15882 459 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 KRT15P19012 456 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 GDF1P27539 372 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 ABCD3P28288 659 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 CRHR1P34998 444 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 EMDP50402 254 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 AGFG1P52594 562 aaKnown RBP9.58□□□□□ -0.88
CPSF1-203ENST00000527916 FBXW4P57775 412 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 DNAJB13P59910 316 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 PSPHP78330 225 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 RAE1P78406 368 aaKnown RBP9.58□□□□□ -0.88
CPSF1-203ENST00000527916 ACSM2AQ08AH3 577 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 DUSP8Q13202 625 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 ACKR1Q16570 336 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 TRMT12Q53H54 448 aaKnown RBP9.58□□□□□ -0.88
CPSF1-203ENST00000527916 TCHHL1Q5QJ38 904 aaPredicted RBP9.58□□□□□ -0.88
CPSF1-203ENST00000527916 ACSM2BQ68CK6 577 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 ZYG11AQ6WRX3 759 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 C20orf204Q6ZNR8 217 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 TRIM46Q7Z4K8 759 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 PACS2Q86VP3 889 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 RDH11Q8TC12 318 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 KLHL29Q96CT2 875 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 APIPQ96GX9 242 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 TMEM41AQ96HV5 264 aa9.58□□□□□ -0.88
CPSF1-203ENST00000527916 METTL2AQ96IZ6 378 aaKnown RBP9.58□□□□□ -0.88
CPSF1-203ENST00000527916 LCORQ96JN0 433 aaPredicted RBP9.58□□□□□ -0.88
CPSF1-203ENST00000527916 TRIB1Q96RU8 372 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms