RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 IQCF3P0C7M6 154 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 GAAP10253 952 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 ADH5P11766 374 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 MYOGP15173 224 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 IFNGR1P15260 489 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 ABOP16442 354 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 ZNF14P17017 642 aaPredicted RBP5.49□□□□□ -1.53
CD44-225ENST00000527326 CXCL3P19876 107 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 RAB6AP20340 208 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 PRKACGP22612 351 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 YWHAQP27348 245 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 CERS1P27544 350 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 C21orf33P30042 268 aaPredicted RBP5.49□□□□□ -1.53
CD44-225ENST00000527326 PRDX5P30044 214 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 HOXA9P31269 272 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 SLC6A4P31645 630 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 HIBADHP31937 336 aaKnown RBP5.49□□□□□ -1.53
CD44-225ENST00000527326 SFNP31947 248 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 CRKLP46109 303 aaKnown RBP5.49□□□□□ -1.53
CD44-225ENST00000527326 EVX1P49640 407 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 DAPP51397 102 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 POLR2JP52435 117 aaKnown RBP5.49□□□□□ -1.53
CD44-225ENST00000527326 SMSP52788 366 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 RAP1AP62834 184 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 NFKB2Q00653 900 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 ST3GAL4Q11206 333 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 BOP1Q14137 746 aaKnown RBP5.49□□□□□ -1.53
CD44-225ENST00000527326 PTGR1Q14914 329 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 MED22Q15528 200 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 USF2Q15853 346 aaPredicted RBP5.49□□□□□ -1.53
CD44-225ENST00000527326 DPYSL2Q16555 572 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 SNRNP35Q16560 246 aaKnown RBP5.49□□□□□ -1.53
CD44-225ENST00000527326 NTRK2Q16620 822 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 CPSF6Q16630 551 aaKnown RBP eCLIP5.49□□□□□ -1.53
CD44-225ENST00000527326 ALG11Q2TAA5 492 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 TMEM35AQ53FP2 167 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 RNLSQ5VYX0 342 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 OR2T5Q6IEZ7 315 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 FAHD1Q6P587 224 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 ENPP6Q6UWR7 440 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 NPNTQ6UXI9 565 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 LRRN1Q6UXK5 716 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 ALKAL1Q6UXT8 129 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 ZNF783Q6ZMS7 281 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 ZNF730Q6ZMV8 503 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 MBOAT1Q6ZNC8 495 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 TMUB2Q71RG4 321 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 DET1Q7L5Y6 550 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 CAMKMTQ7Z624 323 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 GPR149Q86SP6 731 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 PEG10Q86TG7 708 aaKnown RBP5.49□□□□□ -1.53
CD44-225ENST00000527326 MRPL52Q86TS9 123 aaKnown RBP5.49□□□□□ -1.53
CD44-225ENST00000527326 PHYKPLQ8IUZ5 450 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 CMIPQ8IY22 773 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 IFNL2Q8IZJ0 200 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 PRSS35Q8N3Z0 413 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 ARL14Q8N4G2 192 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 PQLC3Q8N755 202 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 FAM71CQ8NEG0 241 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 GPRC5AQ8NFJ5 357 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 BEST4Q8NFU0 473 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 OR2T12Q8NG77 320 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 OR9A2Q8NGT5 310 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 OR10K1Q8NGX5 313 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 OR6K3Q8NGY3 331 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 OR2T29Q8NH02 315 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 OR56A3Q8NH54 315 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 OR56B4Q8NH76 319 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 GATAD2BQ8WXI9 593 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 ASB13Q8WXK3 278 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 ARNTL2Q8WYA1 636 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 CNOT9Q92600 299 aaKnown RBP5.49□□□□□ -1.53
CD44-225ENST00000527326 C3orf49Q96BT1 292 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 L3HYPDHQ96EM0 354 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 MED8Q96G25 268 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 ZNF385AQ96PM9 386 aaKnown RBP5.49□□□□□ -1.53
CD44-225ENST00000527326 DDOQ99489 341 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 PARK7Q99497 189 aaKnown RBP5.49□□□□□ -1.53
CD44-225ENST00000527326 CBWD1Q9BRT8 395 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 POLDIP3Q9BY77 421 aaKnown RBP5.49□□□□□ -1.53
CD44-225ENST00000527326 NRSN2Q9GZP1 204 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 AP5M1Q9H0R1 490 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 HDHD2Q9H0R4 259 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 IKZF4Q9H2S9 585 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 SEMA6CQ9H3T2 930 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 NXF3Q9H4D5 531 aaKnown RBP5.49□□□□□ -1.53
CD44-225ENST00000527326 GSX1Q9H4S2 264 aaPredicted RBP5.49□□□□□ -1.53
CD44-225ENST00000527326 ISYNA1Q9NPH2 558 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 B3GAT2Q9NPZ5 323 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 ACSS2Q9NR19 701 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 SIRT7Q9NRC8 400 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 DCAF13Q9NV06 445 aaKnown RBP5.49□□□□□ -1.53
CD44-225ENST00000527326 AIG1Q9NVV5 245 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 NLE1Q9NVX2 485 aaPredicted RBP5.49□□□□□ -1.53
CD44-225ENST00000527326 VNN3Q9NY84 501 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 RASL12Q9NYN1 266 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 DHCR7Q9UBM7 475 aaKnown RBP5.49□□□□□ -1.53
CD44-225ENST00000527326 ZNF629Q9UEG4 869 aaPredicted RBP5.49□□□□□ -1.53
CD44-225ENST00000527326 FIS1Q9Y3D6 152 aa5.49□□□□□ -1.53
CD44-225ENST00000527326 PLEKHM1Q9Y4G2 1056 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 301.7 ms