RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 PCSK2P16519 638 aa12.91□□□□□ -0.34
CPSF1-201ENST00000526271 TCEA1P23193 301 aaKnown RBP12.91□□□□□ -0.34
CPSF1-201ENST00000526271 CRABP2P29373 138 aa12.91□□□□□ -0.34
CPSF1-201ENST00000526271 KIR2DL2P43627 348 aaPredicted RBP12.91□□□□□ -0.34
CPSF1-201ENST00000526271 CORO7P57737 925 aa12.91□□□□□ -0.34
CPSF1-201ENST00000526271 ILF2Q12905 390 aaKnown RBP12.91□□□□□ -0.34
CPSF1-201ENST00000526271 MROH9Q5TGP6 573 aa12.91□□□□□ -0.34
CPSF1-201ENST00000526271 FBXW10Q5XX13 1052 aa12.91□□□□□ -0.34
CPSF1-201ENST00000526271 HLA-DQA1Q5Y7H0 255 aa12.91□□□□□ -0.34
CPSF1-201ENST00000526271 SLC30A6Q6NXT4 461 aa12.91□□□□□ -0.34
CPSF1-201ENST00000526271 NUP54Q7Z3B4 507 aa12.91□□□□□ -0.34
CPSF1-201ENST00000526271 BTLAQ7Z6A9 289 aa12.91□□□□□ -0.34
CPSF1-201ENST00000526271 TBC1D1Q86TI0 1168 aaPredicted RBP12.91□□□□□ -0.34
CPSF1-201ENST00000526271 PTGR2Q8N8N7 351 aaPredicted RBP12.91□□□□□ -0.34
CPSF1-201ENST00000526271 OR52R1Q8NGF1 315 aa12.91□□□□□ -0.34
CPSF1-201ENST00000526271 AENQ8WTP8 325 aaKnown RBP12.91□□□□□ -0.34
CPSF1-201ENST00000526271 LRRC46Q96FV0 321 aa12.91□□□□□ -0.34
CPSF1-201ENST00000526271 LCORQ96JN0 433 aaPredicted RBP12.91□□□□□ -0.34
CPSF1-201ENST00000526271 Q96MF0 132 aa12.91□□□□□ -0.34
CPSF1-201ENST00000526271 FUT8Q9BYC5 575 aa12.91□□□□□ -0.34
CPSF1-201ENST00000526271 CDC42EP4Q9H3Q1 356 aaKnown RBP12.91□□□□□ -0.34
CPSF1-201ENST00000526271 ZNF395Q9H8N7 513 aaPredicted RBP12.91□□□□□ -0.34
CPSF1-201ENST00000526271 KLHL28Q9NXS3 571 aa12.91□□□□□ -0.34
CPSF1-201ENST00000526271 FLRT3Q9NZU0 649 aa12.91□□□□□ -0.34
CPSF1-201ENST00000526271 TRPS1Q9UHF7 1281 aa12.91□□□□□ -0.34
CPSF1-201ENST00000526271 PCTPQ9UKL6 214 aa12.91□□□□□ -0.34
CPSF1-201ENST00000526271 GPR55Q9Y2T6 319 aaPredicted RBP12.91□□□□□ -0.34
CPSF1-201ENST00000526271 H0Y3Z8 333 aa12.9□□□□□ -0.34
CPSF1-201ENST00000526271 TO15178 435 aa12.9□□□□□ -0.34
CPSF1-201ENST00000526271 ERN1O75460 977 aaKnown RBP12.9□□□□□ -0.34
CPSF1-201ENST00000526271 KLHL2O95198 593 aa12.9□□□□□ -0.34
CPSF1-201ENST00000526271 GFAPP14136 432 aa12.9□□□□□ -0.34
CPSF1-201ENST00000526271 PCSK6P29122 969 aa12.9□□□□□ -0.34
CPSF1-201ENST00000526271 MAGEA12P43365 314 aa12.9□□□□□ -0.34
CPSF1-201ENST00000526271 TMED10P49755 219 aaKnown RBP12.9□□□□□ -0.34
CPSF1-201ENST00000526271 SUCLG1P53597 346 aaKnown RBP12.9□□□□□ -0.34
CPSF1-201ENST00000526271 RCAN2Q14206 197 aa12.9□□□□□ -0.34
CPSF1-201ENST00000526271 GUSBP1Q15486 140 aa12.9□□□□□ -0.34
CPSF1-201ENST00000526271 ZNF628Q5EBL2 1059 aa12.9□□□□□ -0.34
CPSF1-201ENST00000526271 TCHHL1Q5QJ38 904 aaPredicted RBP12.9□□□□□ -0.34
CPSF1-201ENST00000526271 OR5M10Q6IEU7 315 aa12.9□□□□□ -0.34
CPSF1-201ENST00000526271 TRMT10CQ7L0Y3 403 aaKnown RBP12.9□□□□□ -0.34
CPSF1-201ENST00000526271 ZNF550Q7Z398 422 aa12.9□□□□□ -0.34
CPSF1-201ENST00000526271 COMMD6Q7Z4G1 85 aa12.9□□□□□ -0.34
CPSF1-201ENST00000526271 LRRC75A-AS1Q8N1F1 130 aa12.9□□□□□ -0.34
CPSF1-201ENST00000526271 TMEM151AQ8N4L1 468 aa12.9□□□□□ -0.34
CPSF1-201ENST00000526271 OR4N2Q8NGD1 307 aa12.9□□□□□ -0.34
CPSF1-201ENST00000526271 FIG4Q92562 907 aa12.9□□□□□ -0.34
CPSF1-201ENST00000526271 TMBIM1Q969X1 311 aa12.9□□□□□ -0.34
CPSF1-201ENST00000526271 SERPINI1Q99574 410 aa12.9□□□□□ -0.34
CPSF1-201ENST00000526271 PIP5K1AQ99755 562 aa12.9□□□□□ -0.34
CPSF1-201ENST00000526271 CENPKQ9BS16 269 aa12.9□□□□□ -0.34
CPSF1-201ENST00000526271 NTMT1Q9BV86 223 aa12.9□□□□□ -0.34
CPSF1-201ENST00000526271 BRINP2Q9C0B6 783 aa12.9□□□□□ -0.34
CPSF1-201ENST00000526271 OPN3Q9H1Y3 402 aaPredicted RBP12.9□□□□□ -0.34
CPSF1-201ENST00000526271 WDR41Q9HAD4 459 aa12.9□□□□□ -0.34
CPSF1-201ENST00000526271 CPSF2Q9P2I0 782 aaKnown RBP12.9□□□□□ -0.34
CPSF1-201ENST00000526271 TXNDC16Q9P2K2 825 aa12.9□□□□□ -0.34
CPSF1-201ENST00000526271 ADAM29Q9UKF5 820 aa12.9□□□□□ -0.34
CPSF1-201ENST00000526271 PACSIN3Q9UKS6 424 aa12.9□□□□□ -0.34
CPSF1-201ENST00000526271 EDARQ9UNE0 448 aa12.9□□□□□ -0.34
CPSF1-201ENST00000526271 ANGPTL3Q9Y5C1 460 aa12.9□□□□□ -0.34
CPSF1-201ENST00000526271 FREM1Q5H8C1 2179 aa12.9□□□□□ -0.34
CPSF1-201ENST00000526271 ABCA1O95477 2261 aa12.9□□□□□ -0.35
CPSF1-201ENST00000526271 A0A096LPK6 155 aa12.89□□□□□ -0.35
CPSF1-201ENST00000526271 INAFM1C9JVW0 142 aa12.89□□□□□ -0.35
CPSF1-201ENST00000526271 CBR3O75828 277 aa12.89□□□□□ -0.35
CPSF1-201ENST00000526271 CLDN9O95484 217 aa12.89□□□□□ -0.35
CPSF1-201ENST00000526271 THBDP07204 575 aa12.89□□□□□ -0.35
CPSF1-201ENST00000526271 CHN1P15882 459 aa12.89□□□□□ -0.35
CPSF1-201ENST00000526271 TSPAN8P19075 237 aa12.89□□□□□ -0.35
CPSF1-201ENST00000526271 DRD5P21918 477 aa12.89□□□□□ -0.35
CPSF1-201ENST00000526271 CRYGSP22914 178 aa12.89□□□□□ -0.35
CPSF1-201ENST00000526271 SRD5A2P31213 254 aa12.89□□□□□ -0.35
CPSF1-201ENST00000526271 PPICP45877 212 aa12.89□□□□□ -0.35
CPSF1-201ENST00000526271 NRG3P56975 720 aa12.89□□□□□ -0.35
CPSF1-201ENST00000526271 PLCXD2Q0VAA5 305 aa12.89□□□□□ -0.35
CPSF1-201ENST00000526271 SNTA1Q13424 505 aa12.89□□□□□ -0.35
CPSF1-201ENST00000526271 ACAP2Q15057 778 aa12.89□□□□□ -0.35
CPSF1-201ENST00000526271 FRG2Q64ET8 278 aa12.89□□□□□ -0.35
CPSF1-201ENST00000526271 LETMD1Q6P1Q0 360 aa12.89□□□□□ -0.35
CPSF1-201ENST00000526271 EMBQ6PCB8 327 aa12.89□□□□□ -0.35
CPSF1-201ENST00000526271 IFNEQ86WN2 208 aa12.89□□□□□ -0.35
CPSF1-201ENST00000526271 PLCZ1Q86YW0 608 aa12.89□□□□□ -0.35
CPSF1-201ENST00000526271 OR4F6Q8NGB9 312 aa12.89□□□□□ -0.35
CPSF1-201ENST00000526271 OR14L1PQ8NHC6 308 aa12.89□□□□□ -0.35
CPSF1-201ENST00000526271 CAVIN3Q969G5 261 aa12.89□□□□□ -0.35
CPSF1-201ENST00000526271 MRRFQ96E11 262 aaKnown RBP12.89□□□□□ -0.35
CPSF1-201ENST00000526271 SLC35A4Q96G79 324 aa12.89□□□□□ -0.35
CPSF1-201ENST00000526271 ZFP3Q96NJ6 502 aa12.89□□□□□ -0.35
CPSF1-201ENST00000526271 FRG2BQ96QU4 278 aa12.89□□□□□ -0.35
CPSF1-201ENST00000526271 HBEGFQ99075 208 aa12.89□□□□□ -0.35
CPSF1-201ENST00000526271 TM9SF2Q99805 663 aa12.89□□□□□ -0.35
CPSF1-201ENST00000526271 PRM3Q9NNZ6 103 aa12.89□□□□□ -0.35
CPSF1-201ENST00000526271 TAS2R10Q9NYW0 307 aa12.89□□□□□ -0.35
CPSF1-201ENST00000526271 KLRF1Q9NZS2 232 aa12.89□□□□□ -0.35
CPSF1-201ENST00000526271 BCAP29Q9UHQ4 241 aa12.89□□□□□ -0.35
CPSF1-201ENST00000526271 CHD3Q12873 2000 aaKnown RBP12.89□□□□□ -0.35
CPSF1-201ENST00000526271 CADP27708 2225 aa12.88□□□□□ -0.35
CPSF1-201ENST00000526271 A0A087X1B8 175 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms