RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 CLEC4EQ9ULY5 219 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 NOL7Q9UMY1 257 aaKnown RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 SMC3Q9UQE7 1217 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 FARSAQ9Y285 508 aaKnown RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 MEMO1Q9Y316 297 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 AP1M2Q9Y6Q5 423 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 SCN1AP35498 2009 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 PLXNA2O75051 1894 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 ARID1AO14497 2285 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 HCFC1P51610 2035 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 TDRD6O60522 2096 aaKnown RBP1.37□□□□□ -2.19
CD44-212ENST00000524922 IGLV7-46A0A075B6I9 117 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 FAM237BA0A1B0GVD1 139 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 FAM47DPA6NHR8 397 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 RNF212BA8MTL3 300 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 C9J4A7 227 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 F5H5T6 163 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 K7EM74 188 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 CLDN4O14493 209 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 SOCS3O14543 225 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 TSPAN4O14817 238 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 SMAD9O15198 467 aaKnown RBP1.37□□□□□ -2.19
CD44-212ENST00000524922 SLC31A1O15431 190 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 SPRY1O43609 319 aaPredicted RBP1.37□□□□□ -2.19
CD44-212ENST00000524922 STX10O60499 249 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 SLC19A2O60779 497 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 TBL1XO60907 577 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 DAB1O75553 588 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 SPAG6O75602 509 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 KLF7O75840 302 aaPredicted RBP1.37□□□□□ -2.19
CD44-212ENST00000524922 ZMPSTE24O75844 475 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 BMP10O95393 424 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 TSPAN12O95859 305 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 TBX18O95935 607 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 FGF1P05230 155 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 CTSLP07711 333 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 HMBSP08397 361 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 PAEPP09466 180 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 ICAM2P13598 275 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 ACADSP16219 412 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 ZNF30P17039 623 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 F8A1P23610 371 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 MMP11P24347 488 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 ACAT1P24752 427 aaKnown RBP1.37□□□□□ -2.19
CD44-212ENST00000524922 CCR1P32246 355 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 CYLC1P35663 651 aaPredicted RBP1.37□□□□□ -2.19
CD44-212ENST00000524922 HSPA9P38646 679 aaKnown RBP1.37□□□□□ -2.19
CD44-212ENST00000524922 MMP12P39900 470 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 ARL1P40616 181 aaPredicted RBP1.37□□□□□ -2.19
CD44-212ENST00000524922 TNFSF10P50591 281 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 NDST1P52848 882 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 AIF1P55008 147 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 EIF3BP55884 814 aaKnown RBP1.37□□□□□ -2.19
CD44-212ENST00000524922 DAOAP59103 153 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 SNRPD1P62314 119 aaKnown RBP1.37□□□□□ -2.19
CD44-212ENST00000524922 POLR2LP62875 67 aaKnown RBP1.37□□□□□ -2.19
CD44-212ENST00000524922 UBE2IP63279 158 aaKnown RBP1.37□□□□□ -2.19
CD44-212ENST00000524922 CSNK1G2P78368 415 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 TFAMQ00059 246 aaKnown RBP1.37□□□□□ -2.19
CD44-212ENST00000524922 RAD51Q06609 339 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 CYP24A1Q07973 514 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 LGALS3BPQ08380 585 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 DMPKQ09013 629 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 PNRC1Q12796 327 aaPredicted RBP1.37□□□□□ -2.19
CD44-212ENST00000524922 COX10Q12887 443 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 PRKAA1Q13131 559 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 SRSF6Q13247 344 aaKnown RBP1.37□□□□□ -2.19
CD44-212ENST00000524922 SCGB2A2Q13296 93 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 TRPC3Q13507 836 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 SNTB1Q13884 538 aaKnown RBP1.37□□□□□ -2.19
CD44-212ENST00000524922 RFTN1Q14699 578 aaPredicted RBP1.37□□□□□ -2.19
CD44-212ENST00000524922 SYCP1Q15431 976 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 DLG2Q15700 870 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 SNRNP35Q16560 246 aaKnown RBP1.37□□□□□ -2.19
CD44-212ENST00000524922 SLC5A12Q1EHB4 618 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 ZNF699Q32M78 642 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 GRAMD1BQ3KR37 738 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 GTDC1Q4AE62 458 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 CARD16Q5EG05 197 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 BRMS1LQ5PSV4 323 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 C1QTNF12Q5T7M4 302 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 FAM69AQ5T7M9 428 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 ALS2CLQ60I27 953 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 SEL1L3Q68CR1 1132 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 RHBDD2Q6NTF9 364 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 C22orf39Q6P5X5 142 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 IYDQ6PHW0 289 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 TRIM65Q6PJ69 517 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 FIGLAQ6QHK4 219 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 PAQR6Q6TCH4 344 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 FAM198BQ6UWH4 519 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 LCLAT1Q6UWP7 414 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 TMEM207Q6UWW9 146 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 ISLR2Q6UXK2 745 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 LINGO4Q6UY18 593 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 Q6ZR54 194 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 CCDC73Q6ZRK6 1079 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 RGS9BPQ6ZS82 235 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 INTS8Q75QN2 995 aaKnown RBP1.37□□□□□ -2.19
CD44-212ENST00000524922 RUFY3Q7L099 469 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms