RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 PSPHP78330 225 aa18.92■□□□□ 0.62
TRIM35-203ENST00000521253 PSG6Q00889 435 aa18.92■□□□□ 0.62
TRIM35-203ENST00000521253 MAD2L1Q13257 205 aaPredicted RBP18.92■□□□□ 0.62
TRIM35-203ENST00000521253 SLC10A1Q14973 349 aa18.92■□□□□ 0.62
TRIM35-203ENST00000521253 TMEM198Q66K66 360 aa18.92■□□□□ 0.62
TRIM35-203ENST00000521253 DOLPP1Q86YN1 238 aa18.92■□□□□ 0.62
TRIM35-203ENST00000521253 KRTCAP2Q8N6L1 136 aa18.92■□□□□ 0.62
TRIM35-203ENST00000521253 OR4N2Q8NGD1 307 aa18.92■□□□□ 0.62
TRIM35-203ENST00000521253 FAM57AQ8TBR7 257 aa18.92■□□□□ 0.62
TRIM35-203ENST00000521253 NUDT8Q8WV74 236 aa18.92■□□□□ 0.62
TRIM35-203ENST00000521253 NTNG2Q96CW9 530 aa18.92■□□□□ 0.62
TRIM35-203ENST00000521253 SLC35A4Q96G79 324 aa18.92■□□□□ 0.62
TRIM35-203ENST00000521253 CCDC120Q96HB5 630 aa18.92■□□□□ 0.62
TRIM35-203ENST00000521253 COL21A1Q96P44 957 aa18.92■□□□□ 0.62
TRIM35-203ENST00000521253 NUF2Q9BZD4 464 aa18.92■□□□□ 0.62
TRIM35-203ENST00000521253 METTL7AQ9H8H3 244 aa18.92■□□□□ 0.62
TRIM35-203ENST00000521253 THAP1Q9NVV9 213 aa18.92■□□□□ 0.62
TRIM35-203ENST00000521253 ASIC5Q9NY37 505 aa18.92■□□□□ 0.62
TRIM35-203ENST00000521253 SUCOQ9UBS9 1254 aaKnown RBP18.92■□□□□ 0.62
TRIM35-203ENST00000521253 OR10H1Q9Y4A9 318 aa18.92■□□□□ 0.62
TRIM35-203ENST00000521253 OR6C70A6NIJ9 312 aa18.91■□□□□ 0.62
TRIM35-203ENST00000521253 TSPAN2O60636 221 aa18.91■□□□□ 0.62
TRIM35-203ENST00000521253 TPOP07202 933 aa18.91■□□□□ 0.62
TRIM35-203ENST00000521253 H2AFXP16104 143 aaPredicted RBP18.91■□□□□ 0.62
TRIM35-203ENST00000521253 DDX5P17844 614 aaKnown RBP18.91■□□□□ 0.62
TRIM35-203ENST00000521253 PRPS1L1P21108 318 aa18.91■□□□□ 0.62
TRIM35-203ENST00000521253 SMU1Q2TAY7 513 aa18.91■□□□□ 0.62
TRIM35-203ENST00000521253 FNDC7Q5VTL7 733 aa18.91■□□□□ 0.62
TRIM35-203ENST00000521253 TMEM81Q6P7N7 255 aa18.91■□□□□ 0.62
TRIM35-203ENST00000521253 TRILQ7L0X0 811 aa18.91■□□□□ 0.62
TRIM35-203ENST00000521253 WDR53Q7Z5U6 358 aaPredicted RBP18.91■□□□□ 0.62
TRIM35-203ENST00000521253 PACS2Q86VP3 889 aa18.91■□□□□ 0.62
TRIM35-203ENST00000521253 ADOQ96SZ5 270 aa18.91■□□□□ 0.62
TRIM35-203ENST00000521253 ARGLU1Q9NWB6 273 aaPredicted RBP18.91■□□□□ 0.62
TRIM35-203ENST00000521253 NOP53Q9NZM5 478 aaKnown RBP18.91■□□□□ 0.62
TRIM35-203ENST00000521253 B4GALT7Q9UBV7 327 aa18.91■□□□□ 0.62
TRIM35-203ENST00000521253 PLEKHB1Q9UF11 243 aaPredicted RBP18.91■□□□□ 0.62
TRIM35-203ENST00000521253 MYO7BQ6PIF6 2116 aa18.91■□□□□ 0.62
TRIM35-203ENST00000521253 A0A1B0GVC2 190 aa18.9■□□□□ 0.62
TRIM35-203ENST00000521253 CLDN1O95832 211 aa18.9■□□□□ 0.62
TRIM35-203ENST00000521253 ESRRAP11474 423 aaPredicted RBP18.9■□□□□ 0.62
TRIM35-203ENST00000521253 GP1BBP13224 206 aa18.9■□□□□ 0.62
TRIM35-203ENST00000521253 KRT20P35900 424 aa18.9■□□□□ 0.62
TRIM35-203ENST00000521253 PTGDSP41222 190 aa18.9■□□□□ 0.62
TRIM35-203ENST00000521253 MASP1P48740 699 aa18.9■□□□□ 0.62
TRIM35-203ENST00000521253 CPTPQ5TA50 214 aa18.9■□□□□ 0.62
TRIM35-203ENST00000521253 ATG16L1Q676U5 607 aa18.9■□□□□ 0.62
TRIM35-203ENST00000521253 MTFR2Q6P444 385 aa18.9■□□□□ 0.62
TRIM35-203ENST00000521253 C3P1Q6ZMU1 363 aa18.9■□□□□ 0.62
TRIM35-203ENST00000521253 LARP4Q71RC2 724 aaKnown RBP eCLIP18.9■□□□□ 0.62
TRIM35-203ENST00000521253 CD163Q86VB7 1156 aa18.9■□□□□ 0.62
TRIM35-203ENST00000521253 RIMKLAQ8IXN7 391 aa18.9■□□□□ 0.62
TRIM35-203ENST00000521253 RAB3IL1Q8TBN0 382 aa18.9■□□□□ 0.62
TRIM35-203ENST00000521253 TMEM41AQ96HV5 264 aa18.9■□□□□ 0.62
TRIM35-203ENST00000521253 ATP6V1G3Q96LB4 118 aa18.9■□□□□ 0.62
TRIM35-203ENST00000521253 GNRHR2Q96P88 292 aa18.9■□□□□ 0.62
TRIM35-203ENST00000521253 PHF12Q96QT6 1004 aa18.9■□□□□ 0.62
TRIM35-203ENST00000521253 LMF2Q9BU23 707 aaKnown RBP18.9■□□□□ 0.62
TRIM35-203ENST00000521253 MEAF6Q9HAF1 191 aa18.9■□□□□ 0.62
TRIM35-203ENST00000521253 GALNT9Q9HCQ5 603 aa18.9■□□□□ 0.62
TRIM35-203ENST00000521253 QPCTLQ9NXS2 382 aa18.9■□□□□ 0.62
TRIM35-203ENST00000521253 MEMO1Q9Y316 297 aa18.9■□□□□ 0.62
TRIM35-203ENST00000521253 ZNF407Q9C0G0 2248 aa18.9■□□□□ 0.62
TRIM35-203ENST00000521253 PRAMEF25A6NGN4 478 aa18.89■□□□□ 0.61
TRIM35-203ENST00000521253 NPIPA2E9PIF3 369 aa18.89■□□□□ 0.61
TRIM35-203ENST00000521253 NPIPA3F8WFD2 350 aa18.89■□□□□ 0.61
TRIM35-203ENST00000521253 ABCB7O75027 752 aa18.89■□□□□ 0.61
TRIM35-203ENST00000521253 IL12BP29460 328 aa18.89■□□□□ 0.61
TRIM35-203ENST00000521253 DIO3P55073 304 aa18.89■□□□□ 0.61
TRIM35-203ENST00000521253 SNTA1Q13424 505 aa18.89■□□□□ 0.61
TRIM35-203ENST00000521253 GAB1Q13480 694 aa18.89■□□□□ 0.61
TRIM35-203ENST00000521253 MLC1Q15049 377 aa18.89■□□□□ 0.61
TRIM35-203ENST00000521253 TTMPQ5BVD1 217 aa18.89■□□□□ 0.61
TRIM35-203ENST00000521253 SLC30A6Q6NXT4 461 aa18.89■□□□□ 0.61
TRIM35-203ENST00000521253 HDXQ7Z353 690 aa18.89■□□□□ 0.61
TRIM35-203ENST00000521253 TRIM42Q8IWZ5 723 aa18.89■□□□□ 0.61
TRIM35-203ENST00000521253 EFHD2Q96C19 240 aaPredicted RBP18.89■□□□□ 0.61
TRIM35-203ENST00000521253 COQ8BQ96D53 544 aa18.89■□□□□ 0.61
TRIM35-203ENST00000521253 TMCO6Q96DC7 493 aa18.89■□□□□ 0.61
TRIM35-203ENST00000521253 OSBPL11Q9BXB4 747 aa18.89■□□□□ 0.61
TRIM35-203ENST00000521253 UBQLN3Q9H347 655 aa18.89■□□□□ 0.61
TRIM35-203ENST00000521253 LDAHQ9H6V9 325 aa18.89■□□□□ 0.61
TRIM35-203ENST00000521253 MANSC1Q9H8J5 431 aa18.89■□□□□ 0.61
TRIM35-203ENST00000521253 EQTNQ9NQ60 294 aa18.89■□□□□ 0.61
TRIM35-203ENST00000521253 ATAD3AQ9NVI7 634 aa18.89■□□□□ 0.61
TRIM35-203ENST00000521253 KLRF1Q9NZS2 232 aa18.89■□□□□ 0.61
TRIM35-203ENST00000521253 NTMQ9P121 344 aa18.89■□□□□ 0.61
TRIM35-203ENST00000521253 TNFRSF10DQ9UBN6 386 aa18.89■□□□□ 0.61
TRIM35-203ENST00000521253 MARCOQ9UEW3 520 aaPredicted RBP18.89■□□□□ 0.61
TRIM35-203ENST00000521253 C15orf41Q9Y2V0 281 aa18.89■□□□□ 0.61
TRIM35-203ENST00000521253 HRH3Q9Y5N1 445 aa18.89■□□□□ 0.61
TRIM35-203ENST00000521253 NINQ8N4C6 2090 aa18.88■□□□□ 0.61
TRIM35-203ENST00000521253 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.88■□□□□ 0.61
TRIM35-203ENST00000521253 TRGV5A0A0B4J1U4 118 aa18.88■□□□□ 0.61
TRIM35-203ENST00000521253 A0A1W2PRB8 838 aa18.88■□□□□ 0.61
TRIM35-203ENST00000521253 C2orf72A6NCS6 295 aa18.88■□□□□ 0.61
TRIM35-203ENST00000521253 AQP7O14520 342 aa18.88■□□□□ 0.61
TRIM35-203ENST00000521253 ADAM10O14672 748 aa18.88■□□□□ 0.61
TRIM35-203ENST00000521253 GNB5O14775 395 aa18.88■□□□□ 0.61
TRIM35-203ENST00000521253 SUSD5O60279 629 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms