RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 TBC1D24Q9ULP9 559 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 PARP14Q460N5 1801 aa10.27□□□□□ -0.77
PCDHGA1-202ENST00000517417 A0A1W2PQL4 384 aaPredicted RBP10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 J3KTA2 159 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 WISP3O95389 354 aaPredicted RBP10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 SERPINA3P01011 423 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 CSTAP01040 98 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 KLKB1P03952 638 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 BMP1P13497 986 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 RHCEP18577 417 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 PDHA2P29803 388 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 CHAF1BQ13112 559 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 ZNF234Q14588 700 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 PMM1Q92871 262 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 FOXJ1Q92949 421 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 TMEM19Q96HH6 336 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 NELL2Q99435 816 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 PDFQ9HBH1 243 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 HMX3A6NHT5 357 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 GABRR3A8MPY1 467 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 C12orf71A8MTZ7 269 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 C11orf98E9PRG8 122 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 KLK3P07288 261 aaPredicted RBP10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 CEBPBP17676 345 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 HK1P19367 917 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 SSTR4P31391 388 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 SOX2P48431 317 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 PXNP49023 591 aaPredicted RBP10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 SNRPD2P62316 118 aaKnown RBP10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 RPL6Q02878 288 aaKnown RBP10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 ZNF613Q6PF04 617 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 ELMOD2Q8IZ81 293 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 VWA5B2Q8N398 1253 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 JAGN1Q8N5M9 183 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 LRRC20Q8TCA0 184 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 C16orf78Q8WTQ4 265 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 OSTF1Q92882 214 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 SHDQ96IW2 340 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 SORBS1Q9BX66 1292 aaKnown RBP10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 SLA2Q9H6Q3 261 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 MVB12BQ9H7P6 319 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 ASIC5Q9NY37 505 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 APOBEC3BQ9UH17 382 aaKnown RBP10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 A3GALT2U3KPV4 340 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 C1orf226A1L170 272 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 GFRA2O00451 464 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 PCDH17O14917 1159 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 SLC19A1P41440 591 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 SGSHP51688 502 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 UGT8Q16880 541 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 PRSS36Q5K4E3 855 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 NDUFAF5Q5TEU4 345 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 CSNK1A1LQ8N752 337 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 OR52P1PQ8NH57 321 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 UBTD2Q8WUN7 234 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 SECISBP2Q96T21 854 aaKnown RBP10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 PAK6Q9NQU5 681 aaPredicted RBP10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 LYARQ9NX58 379 aaKnown RBP10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 MED16Q9Y2X0 877 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 ENPP4Q9Y6X5 453 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 CACNA1CQ13936 2221 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 EMC8O43402 210 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 ENTPD6O75354 484 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 SOX30O94993 753 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 C5AR1P21730 350 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 GCGRP47871 477 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 LIPIQ6XZB0 460 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 NLGN4XQ8N0W4 816 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 CBARPQ8N350 705 aaPredicted RBP10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 Q8N402 240 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 DTX3Q8N9I9 347 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 NAXEQ8NCW5 288 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 FGF13Q92913 245 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 NIPSNAP1Q9BPW8 284 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 NKX2-4Q9H2Z4 354 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 RNF121Q9H920 327 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 BEX1Q9HBH7 125 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 RANGRFQ9HD47 186 aaPredicted RBP10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 SLC52A3Q9NQ40 469 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 SDHAF3Q9NRP4 125 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 BTNL2Q9UIR0 455 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 NOX1Q9Y5S8 564 aa10.26□□□□□ -0.77
PCDHGA1-202ENST00000517417 SDC3O75056 442 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 KCNK2O95069 426 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 AHSA1O95433 338 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 ARFRP1Q13795 201 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 IHHQ14623 411 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 ELOCQ15369 112 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 OR4C11Q6IEV9 310 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 PGBD2Q6P3X8 592 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 RFLNAQ6ZTI6 216 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 CCDC28AQ8IWP9 274 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 MRPL43Q8N983 215 aaKnown RBP10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 OR4K17Q8NGC6 315 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 OR52N2Q8NGI0 321 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 OR8J1Q8NGP2 316 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 LRR1Q96L50 414 aa10.25□□□□□ -0.77
PCDHGA1-202ENST00000517417 METTL7AQ9H8H3 244 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms