RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 ADRB1P08588 477 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 CISD3P0C7P0 127 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 FAM228BP0C875 321 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 PRKACBP22694 351 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 RPS3P23396 243 aaKnown RBP eCLIP2.79□□□□□ -1.96
NEDD4-208ENST00000508342 CFL1P23528 166 aaKnown RBP2.79□□□□□ -1.96
NEDD4-208ENST00000508342 THBS2P35442 1172 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 BCAP31P51572 246 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 CRISP1P54107 249 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 WNT7BP56706 349 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 VBP1P61758 197 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 SUMO1P63165 101 aaKnown RBP2.79□□□□□ -1.96
NEDD4-208ENST00000508342 DGCR6Q14129 220 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 ISXQ2M1V0 245 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 ABCA11PQ4W5N1 156 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 LBHQ53QV2 105 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-208ENST00000508342 TM4SF20Q53R12 229 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 AADACL2Q6P093 401 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 SPATA6LQ8N4H0 392 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 OR5AR1Q8NGP9 310 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 PIK3R3Q92569 461 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 RORBQ92753 470 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 CERS2Q96G23 380 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 NSL1Q96IY1 281 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 PAFAH2Q99487 392 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 NUDT22Q9BRQ3 303 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 KIR3DX1Q9H7L2 352 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 NUDT4Q9NZJ9 180 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 HEY2Q9UBP5 337 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 EMC9Q9Y3B6 208 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 PCDHB14Q9Y5E9 798 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 WNK2Q9Y3S1 2297 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 FAM166BA8MTA8 275 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 C21orf140B9A014 251 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 EPHB6O15197 1021 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 SCO2O43819 266 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 DNAJB6O75190 326 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 ALOX12BO75342 701 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 KDM4BO94953 1096 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 MED26O95402 600 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 TGFB1P01137 390 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 PRB1P04280 392 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 FAM58BPP0C7Q3 252 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 ADAM8P78325 824 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 WSCD2Q2TBF2 565 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 NKAPLQ5M9Q1 402 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 VWA5B1Q5TIE3 1220 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 RSBN1Q5VWQ0 802 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-208ENST00000508342 CCNI2Q6ZMN8 369 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-208ENST00000508342 MBOAT1Q6ZNC8 495 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 GPALPP1Q8IXQ4 340 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 PHTF2Q8N3S3 785 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 FAM110BQ8TC76 370 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 C22orf15Q8WYQ4 148 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 OR1E3Q8WZA6 343 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 POP5Q969H6 163 aaKnown RBP2.79□□□□□ -1.96
NEDD4-208ENST00000508342 PCDHB18PQ96TA0 734 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 NPY6RQ99463 290 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 PKP4Q99569 1192 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 PARD6AQ9NPB6 346 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 ZCCHC3Q9NUD5 404 aaKnown RBP2.79□□□□□ -1.96
NEDD4-208ENST00000508342 DMAC2Q9NW81 257 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 STOX2Q9P2F5 926 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-208ENST00000508342 FBXL4Q9UKA2 621 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 HS3ST2Q9Y278 367 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 KLF13Q9Y2Y9 288 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-208ENST00000508342 NAALAD2Q9Y3Q0 740 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 AP4S1Q9Y587 144 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 ATP23Q9Y6H3 246 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 TMEM131Q92545 1883 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 A0A075B6Q4 140 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 A0A1B0GTI1 187 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 IRGMA1A4Y4 181 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 FAM172BPA6NC97 362 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 VSTM2BA6NLU5 285 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 C17orf105B2RV13 164 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 TNFRSF10CO14798 259 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 MRASO14807 208 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 ZFAND5O76080 213 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 ATE1O95260 518 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 SERPINE1P05121 402 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 RNH1P13489 461 aaKnown RBP2.79□□□□□ -1.96
NEDD4-208ENST00000508342 PVRP15151 417 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 KIR2DL3P43628 341 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 KCNC1P48547 511 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 SLC1A6P48664 564 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 RAB10P61026 200 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 IFI35P80217 286 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-208ENST00000508342 SPOCK1Q08629 439 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 PAFAH1B3Q15102 231 aaKnown RBP2.79□□□□□ -1.96
NEDD4-208ENST00000508342 MED22Q15528 200 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 SGCAQ16586 387 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 NKPD1Q17RQ9 610 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 PTCHD3Q3KNS1 767 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 CARD17Q5XLA6 110 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 ISLR2Q6UXK2 745 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF765Q7L2R6 523 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 SLC46A3Q7Z3Q1 461 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.79□□□□□ -1.96
NEDD4-208ENST00000508342 CENPVQ7Z7K6 275 aaPredicted RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms