RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 SIMC1Q8NDZ2 872 aa18.22■□□□□ 0.51
SFXN1-209ENST00000508290 CEP70Q8NHQ1 597 aa18.22■□□□□ 0.51
SFXN1-209ENST00000508290 TUBGCP3Q96CW5 907 aa18.22■□□□□ 0.51
SFXN1-209ENST00000508290 NTNG2Q96CW9 530 aa18.22■□□□□ 0.51
SFXN1-209ENST00000508290 JSRP1Q96MG2 331 aaPredicted RBP18.22■□□□□ 0.51
SFXN1-209ENST00000508290 PHF12Q96QT6 1004 aa18.22■□□□□ 0.51
SFXN1-209ENST00000508290 DMRTA2Q96SC8 542 aa18.22■□□□□ 0.51
SFXN1-209ENST00000508290 OSBPL11Q9BXB4 747 aa18.22■□□□□ 0.51
SFXN1-209ENST00000508290 EXO5Q9H790 373 aa18.22■□□□□ 0.51
SFXN1-209ENST00000508290 HHATLQ9HCP6 504 aa18.22■□□□□ 0.51
SFXN1-209ENST00000508290 Q9N2J8 555 aa18.22■□□□□ 0.51
SFXN1-209ENST00000508290 ASIC5Q9NY37 505 aa18.22■□□□□ 0.51
SFXN1-209ENST00000508290 SH3BP4Q9P0V3 963 aa18.22■□□□□ 0.51
SFXN1-209ENST00000508290 HAO1Q9UJM8 370 aa18.22■□□□□ 0.51
SFXN1-209ENST00000508290 C15orf41Q9Y2V0 281 aa18.22■□□□□ 0.51
SFXN1-209ENST00000508290 OR10H1Q9Y4A9 318 aa18.22■□□□□ 0.51
SFXN1-209ENST00000508290 FAM47E-STBD1D6RA91 191 aa18.21■□□□□ 0.51
SFXN1-209ENST00000508290 UPK1AO00322 258 aa18.21■□□□□ 0.51
SFXN1-209ENST00000508290 WDR1O75083 606 aa18.21■□□□□ 0.51
SFXN1-209ENST00000508290 SKAP2O75563 359 aaPredicted RBP18.21■□□□□ 0.51
SFXN1-209ENST00000508290 REM1O75628 298 aa18.21■□□□□ 0.51
SFXN1-209ENST00000508290 GDF1P27539 372 aa18.21■□□□□ 0.51
SFXN1-209ENST00000508290 GPC1P35052 558 aa18.21■□□□□ 0.51
SFXN1-209ENST00000508290 PTGER4P35408 488 aa18.21■□□□□ 0.51
SFXN1-209ENST00000508290 SLC1A6P48664 564 aa18.21■□□□□ 0.51
SFXN1-209ENST00000508290 RPL14P50914 215 aaKnown RBP18.21■□□□□ 0.51
SFXN1-209ENST00000508290 MANFP55145 182 aaKnown RBP18.21■□□□□ 0.51
SFXN1-209ENST00000508290 STX3Q13277 289 aa18.21■□□□□ 0.51
SFXN1-209ENST00000508290 WLSQ5T9L3 541 aa18.21■□□□□ 0.51
SFXN1-209ENST00000508290 TIGD3Q6B0B8 471 aa18.21■□□□□ 0.51
SFXN1-209ENST00000508290 ACAD11Q709F0 780 aa18.21■□□□□ 0.51
SFXN1-209ENST00000508290 RAB3IL1Q8TBN0 382 aa18.21■□□□□ 0.51
SFXN1-209ENST00000508290 GFM2Q969S9 779 aaKnown RBP18.21■□□□□ 0.51
SFXN1-209ENST00000508290 TMBIM1Q969X1 311 aa18.21■□□□□ 0.51
SFXN1-209ENST00000508290 CHST11Q9NPF2 352 aa18.21■□□□□ 0.51
SFXN1-209ENST00000508290 COQ3Q9NZJ6 369 aa18.21■□□□□ 0.51
SFXN1-209ENST00000508290 KLRF1Q9NZS2 232 aa18.21■□□□□ 0.51
SFXN1-209ENST00000508290 NTMQ9P121 344 aa18.21■□□□□ 0.51
SFXN1-209ENST00000508290 ATP6V1HQ9UI12 483 aa18.21■□□□□ 0.51
SFXN1-209ENST00000508290 WDR91A4D1P6 747 aa18.2■□□□□ 0.5
SFXN1-209ENST00000508290 PRAMEF25A6NGN4 478 aa18.2■□□□□ 0.5
SFXN1-209ENST00000508290 SCAMP2O15127 329 aaKnown RBP18.2■□□□□ 0.5
SFXN1-209ENST00000508290 AKAP10O43572 662 aa18.2■□□□□ 0.5
SFXN1-209ENST00000508290 TSPAN2O60636 221 aa18.2■□□□□ 0.5
SFXN1-209ENST00000508290 UGT2B11O75310 529 aa18.2■□□□□ 0.5
SFXN1-209ENST00000508290 HPNP05981 417 aa18.2■□□□□ 0.5
SFXN1-209ENST00000508290 GABRA1P14867 456 aa18.2■□□□□ 0.5
SFXN1-209ENST00000508290 PRPS1L1P21108 318 aa18.2■□□□□ 0.5
SFXN1-209ENST00000508290 GCKP35557 465 aa18.2■□□□□ 0.5
SFXN1-209ENST00000508290 CORO7P57737 925 aa18.2■□□□□ 0.5
SFXN1-209ENST00000508290 C21orf58P58505 322 aa18.2■□□□□ 0.5
SFXN1-209ENST00000508290 PSG6Q00889 435 aa18.2■□□□□ 0.5
SFXN1-209ENST00000508290 EMX2Q04743 252 aa18.2■□□□□ 0.5
SFXN1-209ENST00000508290 DECR1Q16698 335 aa18.2■□□□□ 0.5
SFXN1-209ENST00000508290 ZCCHC12Q6PEW1 402 aa18.2■□□□□ 0.5
SFXN1-209ENST00000508290 SLC44A2Q8IWA5 706 aaPredicted RBP18.2■□□□□ 0.5
SFXN1-209ENST00000508290 TRIM42Q8IWZ5 723 aa18.2■□□□□ 0.5
SFXN1-209ENST00000508290 OR1J4Q8NGS1 313 aa18.2■□□□□ 0.5
SFXN1-209ENST00000508290 NEIL3Q8TAT5 605 aa18.2■□□□□ 0.5
SFXN1-209ENST00000508290 LMF2Q9BU23 707 aaKnown RBP18.2■□□□□ 0.5
SFXN1-209ENST00000508290 UBQLN3Q9H347 655 aa18.2■□□□□ 0.5
SFXN1-209ENST00000508290 NKIRAS1Q9NYS0 192 aa18.2■□□□□ 0.5
SFXN1-209ENST00000508290 NOP53Q9NZM5 478 aaKnown RBP18.2■□□□□ 0.5
SFXN1-209ENST00000508290 BAIAP2L1Q9UHR4 511 aa18.2■□□□□ 0.5
SFXN1-209ENST00000508290 TMEM120BA0PK00 339 aa18.19■□□□□ 0.5
SFXN1-209ENST00000508290 NPIPA2E9PIF3 369 aa18.19■□□□□ 0.5
SFXN1-209ENST00000508290 NPIPA3F8WFD2 350 aa18.19■□□□□ 0.5
SFXN1-209ENST00000508290 ADAM10O14672 748 aa18.19■□□□□ 0.5
SFXN1-209ENST00000508290 SNPHO15079 494 aa18.19■□□□□ 0.5
SFXN1-209ENST00000508290 SOX30O94993 753 aa18.19■□□□□ 0.5
SFXN1-209ENST00000508290 LRATO95237 230 aa18.19■□□□□ 0.5
SFXN1-209ENST00000508290 RFPL3SP0C7P2 107 aa18.19■□□□□ 0.5
SFXN1-209ENST00000508290 CDK9P50750 372 aaKnown RBP18.19■□□□□ 0.5
SFXN1-209ENST00000508290 PRR5P85299 388 aa18.19■□□□□ 0.5
SFXN1-209ENST00000508290 ADORA2A-AS1P86434 159 aa18.19■□□□□ 0.5
SFXN1-209ENST00000508290 HSPB3Q12988 150 aa18.19■□□□□ 0.5
SFXN1-209ENST00000508290 MPP2Q14168 576 aa18.19■□□□□ 0.5
SFXN1-209ENST00000508290 SF3B4Q15427 424 aaKnown RBP eCLIP18.19■□□□□ 0.5
SFXN1-209ENST00000508290 PRSS53Q2L4Q9 553 aa18.19■□□□□ 0.5
SFXN1-209ENST00000508290 GXYLT1Q4G148 440 aa18.19■□□□□ 0.5
SFXN1-209ENST00000508290 IL23RQ5VWK5 629 aa18.19■□□□□ 0.5
SFXN1-209ENST00000508290 NPSR1Q6W5P4 371 aa18.19■□□□□ 0.5
SFXN1-209ENST00000508290 LARP4Q71RC2 724 aaKnown RBP eCLIP18.19■□□□□ 0.5
SFXN1-209ENST00000508290 ZNF781Q8N8C0 355 aa18.19■□□□□ 0.5
SFXN1-209ENST00000508290 CDRT4Q8N9R6 151 aa18.19■□□□□ 0.5
SFXN1-209ENST00000508290 ASB5Q8WWX0 329 aa18.19■□□□□ 0.5
SFXN1-209ENST00000508290 ADOQ96SZ5 270 aa18.19■□□□□ 0.5
SFXN1-209ENST00000508290 RUBCNLQ9H714 662 aa18.19■□□□□ 0.5
SFXN1-209ENST00000508290 ANKRA2Q9H9E1 313 aa18.19■□□□□ 0.5
SFXN1-209ENST00000508290 ACAD8Q9UKU7 415 aa18.19■□□□□ 0.5
SFXN1-209ENST00000508290 ABCG2Q9UNQ0 655 aa18.19■□□□□ 0.5
SFXN1-209ENST00000508290 ICE1Q9Y2F5 2266 aa18.18■□□□□ 0.5
SFXN1-209ENST00000508290 ICOSLGO75144 302 aa18.18■□□□□ 0.5
SFXN1-209ENST00000508290 CBR3O75828 277 aa18.18■□□□□ 0.5
SFXN1-209ENST00000508290 CELA3AP09093 270 aa18.18■□□□□ 0.5
SFXN1-209ENST00000508290 ACVR2AP27037 513 aa18.18■□□□□ 0.5
SFXN1-209ENST00000508290 CPTPQ5TA50 214 aa18.18■□□□□ 0.5
SFXN1-209ENST00000508290 ATG16L1Q676U5 607 aa18.18■□□□□ 0.5
SFXN1-209ENST00000508290 ANGPTL8Q6UXH0 198 aa18.18■□□□□ 0.5
SFXN1-209ENST00000508290 ZNF551Q7Z340 670 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms