RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 EIF3KQ9UBQ5 218 aaKnown RBP3.54□□□□□ -1.84
DHFR-204ENST00000508282 FAM153AQ9UHL3 310 aa3.54□□□□□ -1.84
DHFR-204ENST00000508282 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
DHFR-204ENST00000508282 NCAPD2Q15021 1401 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 CROCCQ5TZA2 2017 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 SLC15A5A6NIM6 579 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 E7ENQ6 273 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 CPNE6O95741 557 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 PCCBP05166 539 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 FUT1P19526 365 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 AKT2P31751 481 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 MDH2P40926 338 aaKnown RBP3.53□□□□□ -1.84
DHFR-204ENST00000508282 TDO2P48775 406 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 TRPC1P48995 793 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 TNFSF10P50591 281 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 GBX2P52951 348 aaPredicted RBP3.53□□□□□ -1.84
DHFR-204ENST00000508282 SSTP61278 116 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 CXCL6P80162 114 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 PAX2Q02962 417 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 GK2Q14410 553 aaPredicted RBP3.53□□□□□ -1.84
DHFR-204ENST00000508282 PPP1R3AQ16821 1122 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 MAJINQ3KP22 176 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 C1orf189Q5VU69 101 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 ZNF573Q86YE8 665 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 UNC5CLQ8IV45 518 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 ZNF525Q8N782 197 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 SIDT2Q8NBJ9 832 aaKnown RBP3.53□□□□□ -1.84
DHFR-204ENST00000508282 ZNF671Q8TAW3 534 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 SELENOMQ8WWX9 145 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 FCGR1BQ92637 280 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 HAS2Q92819 552 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 GUCD1Q96NT3 240 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 TCHPQ9BT92 498 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 PAXXQ9BUH6 204 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 TRPV6Q9H1D0 765 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 ELL3Q9HB65 397 aaPredicted RBP3.53□□□□□ -1.84
DHFR-204ENST00000508282 HOMER3Q9NSC5 361 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 VNN3Q9NY84 501 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 IL17CQ9P0M4 197 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 LAMP5Q9UJQ1 280 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 SNX6Q9UNH7 406 aa3.53□□□□□ -1.84
DHFR-204ENST00000508282 FAM220BPB1ANY3 271 aa3.52□□□□□ -1.85
DHFR-204ENST00000508282 UBXN8O00124 270 aa3.52□□□□□ -1.85
DHFR-204ENST00000508282 NUDT17P0C025 328 aa3.52□□□□□ -1.85
DHFR-204ENST00000508282 CALML3P27482 149 aa3.52□□□□□ -1.85
DHFR-204ENST00000508282 GDF1P27539 372 aa3.52□□□□□ -1.85
DHFR-204ENST00000508282 PSMA5P28066 241 aa3.52□□□□□ -1.85
DHFR-204ENST00000508282 PBLDP30039 288 aaPredicted RBP3.52□□□□□ -1.85
DHFR-204ENST00000508282 KRTAP10-8P60410 259 aa3.52□□□□□ -1.85
DHFR-204ENST00000508282 CCZ1BP86790 482 aa3.52□□□□□ -1.85
DHFR-204ENST00000508282 CCZ1P86791 482 aaPredicted RBP3.52□□□□□ -1.85
DHFR-204ENST00000508282 GABPB1Q06547 395 aaPredicted RBP3.52□□□□□ -1.85
DHFR-204ENST00000508282 RFTN1Q14699 578 aaPredicted RBP3.52□□□□□ -1.85
DHFR-204ENST00000508282 HEPACAMQ14CZ8 416 aa3.52□□□□□ -1.85
DHFR-204ENST00000508282 KRT31Q15323 416 aa3.52□□□□□ -1.85
DHFR-204ENST00000508282 GSG1Q2KHT4 349 aa3.52□□□□□ -1.85
DHFR-204ENST00000508282 LRRC23Q53EV4 343 aaPredicted RBP3.52□□□□□ -1.85
DHFR-204ENST00000508282 LDLRAP1Q5SW96 308 aa3.52□□□□□ -1.85
DHFR-204ENST00000508282 ATAD3BQ5T9A4 648 aa3.52□□□□□ -1.85
DHFR-204ENST00000508282 FAM219BQ5XKK7 198 aa3.52□□□□□ -1.85
DHFR-204ENST00000508282 STHQ8IWL8 128 aa3.52□□□□□ -1.85
DHFR-204ENST00000508282 ARL14Q8N4G2 192 aa3.52□□□□□ -1.85
DHFR-204ENST00000508282 RNF148Q8N7C7 305 aa3.52□□□□□ -1.85
DHFR-204ENST00000508282 FAM71CQ8NEG0 241 aa3.52□□□□□ -1.85
DHFR-204ENST00000508282 U2AF1L4Q8WU68 220 aaKnown RBP3.52□□□□□ -1.85
DHFR-204ENST00000508282 SLC5A11Q8WWX8 675 aa3.52□□□□□ -1.85
DHFR-204ENST00000508282 RAB3CQ96E17 227 aa3.52□□□□□ -1.85
DHFR-204ENST00000508282 NUS1Q96E22 293 aa3.52□□□□□ -1.85
DHFR-204ENST00000508282 PHYHIPLQ96FC7 376 aa3.52□□□□□ -1.85
DHFR-204ENST00000508282 COQ7Q99807 217 aa3.52□□□□□ -1.85
DHFR-204ENST00000508282 TMEM231Q9H6L2 316 aa3.52□□□□□ -1.85
DHFR-204ENST00000508282 SLC25A19Q9HC21 320 aa3.52□□□□□ -1.85
DHFR-204ENST00000508282 GDF3Q9NR23 364 aa3.52□□□□□ -1.85
DHFR-204ENST00000508282 CNOT2Q9NZN8 540 aaKnown RBP3.52□□□□□ -1.85
DHFR-204ENST00000508282 CTNNA3Q9UI47 895 aa3.52□□□□□ -1.85
DHFR-204ENST00000508282 CLEC4EQ9ULY5 219 aa3.52□□□□□ -1.85
DHFR-204ENST00000508282 SMC3Q9UQE7 1217 aa3.52□□□□□ -1.85
DHFR-204ENST00000508282 KLF2Q9Y5W3 355 aaPredicted RBP3.52□□□□□ -1.85
DHFR-204ENST00000508282 COL16A1Q07092 1604 aaPredicted RBP3.52□□□□□ -1.85
DHFR-204ENST00000508282 FER1L5A0AVI2 2057 aa3.51□□□□□ -1.85
DHFR-204ENST00000508282 KDRP35968 1356 aa3.51□□□□□ -1.85
DHFR-204ENST00000508282 IGHV3OR16-12A0A075B7B8 117 aa3.51□□□□□ -1.85
DHFR-204ENST00000508282 CCDC169A6NNP5 214 aa3.51□□□□□ -1.85
DHFR-204ENST00000508282 CDX4O14627 284 aaPredicted RBP3.51□□□□□ -1.85
DHFR-204ENST00000508282 STBD1O95210 358 aa3.51□□□□□ -1.85
DHFR-204ENST00000508282 KRT6AP02538 564 aa3.51□□□□□ -1.85
DHFR-204ENST00000508282 KRT8P05787 483 aa3.51□□□□□ -1.85
DHFR-204ENST00000508282 CHRNGP07510 517 aa3.51□□□□□ -1.85
DHFR-204ENST00000508282 SFTPBP07988 381 aa3.51□□□□□ -1.85
DHFR-204ENST00000508282 THRBP10828 461 aa3.51□□□□□ -1.85
DHFR-204ENST00000508282 RALAP11233 206 aa3.51□□□□□ -1.85
DHFR-204ENST00000508282 B4GALT1P15291 398 aa3.51□□□□□ -1.85
DHFR-204ENST00000508282 ZBTB25P24278 435 aa3.51□□□□□ -1.85
DHFR-204ENST00000508282 CYP2F1P24903 491 aa3.51□□□□□ -1.85
DHFR-204ENST00000508282 STIP1P31948 543 aaKnown RBP3.51□□□□□ -1.85
DHFR-204ENST00000508282 FNTAP49354 379 aa3.51□□□□□ -1.85
DHFR-204ENST00000508282 NUMBP49757 651 aa3.51□□□□□ -1.85
DHFR-204ENST00000508282 SULT1E1P49888 294 aa3.51□□□□□ -1.85
DHFR-204ENST00000508282 SLC25A1P53007 311 aa3.51□□□□□ -1.85
DHFR-204ENST00000508282 HSPA14Q0VDF9 509 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms