RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 IFT27Q9BW83 186 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 BCAS3Q9H6U6 928 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 ANKRA2Q9H9E1 313 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 ELP3Q9H9T3 547 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 EXOSC3Q9NQT5 275 aaKnown RBP10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 MIOSQ9NXC5 875 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 ZNF629Q9UEG4 869 aaPredicted RBP10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 ASTN1O14525 1302 aa10.22□□□□□ -0.77
PDLIM5-210ENST00000508216 TCRBV7S3A2A0A539 114 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 TMEM200CA6NKL6 621 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 SEC14L6B5MCN3 397 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 UBDO15205 165 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 FRS3O43559 492 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 GALR3O60755 368 aaPredicted RBP10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 AOC2O75106 756 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 SEMA7AO75326 666 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 RGS11O94810 467 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 OR4F21O95013 312 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 GDF11O95390 407 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 MATN4O95460 622 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 AP2A1O95782 977 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 EGFP01133 1207 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 HMBSP08397 361 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 ITGA5P08648 1049 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 BMP3P12645 472 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 CXCL3P19876 107 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 CNR1P21554 472 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 NNMTP40261 264 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 GCLMP48507 274 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 PPT1P50897 306 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 HCCSP53701 268 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 VLDLRP98155 873 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 MYL7Q01449 175 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 CHRNB3Q05901 458 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 NPRL3Q12980 569 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 DPYSL3Q14195 570 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 TMEM255AQ5JRV8 349 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 TSTD2Q5T7W7 516 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 OR4F3Q6IEY1 312 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 IGF2-ASQ6U949 168 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 CLEC9AQ6UXN8 241 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 AHSA2Q719I0 299 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 ARMCX2Q7L311 632 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 OR2G2Q8NGZ5 317 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 TADA1Q96BN2 335 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 SHDQ96IW2 340 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 CCDC115Q96NT0 180 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 PARK7Q99497 189 aaKnown RBP10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 PCED1AQ9H1Q7 454 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 FBXO44Q9H4M3 255 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 MAGIXQ9H6Y5 334 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 SPHK2Q9NRA0 654 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 RBAKQ9NYW8 714 aaPredicted RBP10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 SLC9A8Q9Y2E8 581 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 POFUT2Q9Y2G5 429 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 PCDHA11Q9Y5I1 949 aa10.21□□□□□ -0.77
PDLIM5-210ENST00000508216 LRIT2A6NDA9 550 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 MAN2B1O00754 1011 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 EREGO14944 169 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 EIF3DO15371 548 aaKnown RBP eCLIP10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 SUV39H1O43463 412 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 OR2T1O43869 369 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 PRAF2O60831 178 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 ADH1AP07327 375 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 HKR1P10072 659 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 DRD2P14416 443 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 GABRB1P18505 474 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 HSD11B1P28845 292 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 HOXA13P31271 388 aaPredicted RBP10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 CSF2RBP32927 897 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 SDC2P34741 201 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 FHITP49789 147 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 AGFG1P52594 562 aaKnown RBP10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 VSX2P58304 361 aaPredicted RBP10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 RAP2BP61225 183 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 GAMTQ14353 236 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 SURF2Q15527 256 aaPredicted RBP10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 FSCN1Q16658 493 aaKnown RBP10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 NKPD1Q17RQ9 610 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 DUOXA1Q1HG43 343 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 ISXQ2M1V0 245 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 DNAJC24Q6P3W2 148 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 GSG1LQ6UXU4 331 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 NKAPQ8N5F7 415 aaKnown RBP10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 CCDC54Q8NEL0 328 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 DNERQ8NFT8 737 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 CYP2W1Q8TAV3 490 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 ASB13Q8WXK3 278 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 THRSPQ92748 146 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 ELMOD3Q96FG2 381 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 MASTLQ96GX5 879 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 KREMEN1Q96MU8 473 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 MTERF1Q99551 399 aaKnown RBP10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 PRRT1Q99946 306 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 ACBD6Q9BR61 282 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 MRPL13Q9BYD1 178 aaKnown RBP10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 FGFBP2Q9BYJ0 223 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 ABCB9Q9NP78 766 aa10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 ADARB2Q9NS39 739 aaKnown RBP10.21□□□□□ -0.78
PDLIM5-210ENST00000508216 MTMR10Q9NXD2 777 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms