RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 ARL6IP5O75915 188 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 LTFP02788 710 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 CFHP08603 1231 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 S100A3P33764 101 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 SHMT2P34897 504 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 RFX2P48378 723 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 IDH2P48735 452 aaKnown RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ACOT2P49753 483 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 CLCN7P51798 805 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 CAPZA1P52907 286 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 HCCSP53701 268 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 SLC26A5P58743 744 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 CFHR1Q03591 330 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 C2orf80Q0P641 193 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ST3GAL4Q11206 333 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ILF3Q12906 894 aaKnown RBP eCLIP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 GRM3Q14832 879 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 NRN1LQ496H8 165 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 MANEAQ5SRI9 462 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 RIPPLY2Q5TAB7 128 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 TMPRSS11FQ6ZWK6 438 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 PTAR1Q7Z6K3 402 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 SPICQ8N5J4 248 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ZNF366Q8N895 744 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ZNF454Q8N9F8 522 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 Q8N9G6 341 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 BEST4Q8NFU0 473 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 KLHL15Q96M94 604 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 SFXN2Q96NB2 322 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 FAM129BQ96TA1 746 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 PFDN5Q99471 154 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 TMED9Q9BVK6 235 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 SLC29A3Q9BZD2 475 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 BTBD1Q9H0C5 482 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 C11orf54Q9H0W9 315 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 SLC35C2Q9NQQ7 365 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 DUSP22Q9NRW4 184 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 NRBP2Q9NSY0 501 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 BTNL2Q9UIR0 455 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 TBC1D24Q9ULP9 559 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ST3GAL5Q9UNP4 418 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 GPR34Q9UPC5 381 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 CRYL1Q9Y2S2 319 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 PCDHB9Q9Y5E1 797 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 TRPV2Q9Y5S1 764 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 TCRBV5S2A0A599 114 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 RFPL4AA6NLU0 287 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 RFPL4AL1F8VTS6 287 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 RGS14O43566 566 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 CREBL2O60519 120 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 CREG1O75629 220 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 OTCP00480 354 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 AHSGP02765 367 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 MT-ND4LP03901 98 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 IL5P05113 134 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 SCG5P05408 212 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 HTR1AP08908 422 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ZNF250P15622 560 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 C5AR1P21730 350 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 LHX1P48742 406 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 FNTBP49356 437 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 GDF10P55107 478 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 EIF6P56537 245 aaKnown RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 BPIFB3P59826 476 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 TRA2BP62995 288 aaKnown RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 GABREP78334 506 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 YWHAHQ04917 246 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 CACNB2Q08289 660 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ERV3-1Q14264 604 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 MICBQ29980 383 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 PYDC2Q56P42 97 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 PLA2G2CQ5R387 149 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 FAM160B1Q5W0V3 765 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ZNF730Q6ZMV8 503 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 BTLAQ7Z6A9 289 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 RNF180Q86T96 592 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 RBM23Q86U06 439 aaKnown RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 TRAPPC5Q8IUR0 188 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 SPATA2LQ8IUW3 424 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 CEP97Q8IW35 865 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 MFSD9Q8NBP5 474 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 VN1R2Q8NFZ6 395 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 TM9SF4Q92544 642 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 RFKQ969G6 155 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 RGMAQ96B86 450 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ULK4Q96C45 1275 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 PYURFQ96I23 114 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ZNF681Q96N22 645 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 CSPG4P5Q96PW8 444 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 SNRNP25Q9BV90 132 aaKnown RBP2.62□□□□□ -1.99
NEDD4-204ENST00000503468 NLNQ9BYT8 704 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 CXCL16Q9H2A7 254 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 GHITMQ9H3K2 345 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 CHRAC1Q9NRG0 131 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 SMCO4Q9NRQ5 59 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 DTX4Q9Y2E6 619 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 ABCA12Q86UK0 2595 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 MEN1O00255 615 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 CLIC1O00299 241 aa2.62□□□□□ -1.99
NEDD4-204ENST00000503468 MATN3O15232 486 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms