RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 COX10Q12887 443 aa3.06□□□□□ -1.92
CALD1-224ENST00000498254 NECTIN1Q15223 517 aa3.06□□□□□ -1.92
CALD1-224ENST00000498254 SHROOM1Q2M3G4 852 aaPredicted RBP3.06□□□□□ -1.92
CALD1-224ENST00000498254 POM121L1PQ3SYA9 428 aa3.06□□□□□ -1.92
CALD1-224ENST00000498254 MOGAT2Q3SYC2 334 aa3.06□□□□□ -1.92
CALD1-224ENST00000498254 CEP55Q53EZ4 464 aa3.06□□□□□ -1.92
CALD1-224ENST00000498254 MUC21Q5SSG8 566 aa3.06□□□□□ -1.92
CALD1-224ENST00000498254 SEL1L2Q5TEA6 688 aa3.06□□□□□ -1.92
CALD1-224ENST00000498254 ATF7IP2Q5U623 682 aa3.06□□□□□ -1.92
CALD1-224ENST00000498254 SLX4IPQ5VYV7 408 aa3.06□□□□□ -1.92
CALD1-224ENST00000498254 WDR25Q64LD2 544 aaPredicted RBP3.06□□□□□ -1.92
CALD1-224ENST00000498254 CENPPQ6IPU0 288 aa3.06□□□□□ -1.92
CALD1-224ENST00000498254 APOOLQ6UXV4 268 aa3.06□□□□□ -1.92
CALD1-224ENST00000498254 GDPGP1Q6ZNW5 385 aa3.06□□□□□ -1.92
CALD1-224ENST00000498254 C18orf65Q6ZTR6 163 aa3.06□□□□□ -1.92
CALD1-224ENST00000498254 USP43Q70EL4 1123 aa3.06□□□□□ -1.92
CALD1-224ENST00000498254 DPY19L4Q7Z388 723 aa3.06□□□□□ -1.92
CALD1-224ENST00000498254 TSEN54Q7Z6J9 526 aaKnown RBP3.06□□□□□ -1.92
CALD1-224ENST00000498254 KIAA1328Q86T90 577 aa3.06□□□□□ -1.92
CALD1-224ENST00000498254 RANBP3LQ86VV4 465 aaPredicted RBP3.06□□□□□ -1.92
CALD1-224ENST00000498254 ZNF781Q8N8C0 355 aa3.06□□□□□ -1.92
CALD1-224ENST00000498254 SAMD12Q8N8I0 201 aa3.06□□□□□ -1.92
CALD1-224ENST00000498254 NFAM1Q8NET5 270 aaPredicted RBP3.06□□□□□ -1.92
CALD1-224ENST00000498254 SPPL2AQ8TCT8 520 aa3.06□□□□□ -1.92
CALD1-224ENST00000498254 SLC5A11Q8WWX8 675 aa3.06□□□□□ -1.92
CALD1-224ENST00000498254 TADA1Q96BN2 335 aa3.06□□□□□ -1.92
CALD1-224ENST00000498254 UPRTQ96BW1 309 aa3.06□□□□□ -1.92
CALD1-224ENST00000498254 GSDMAQ96QA5 445 aa3.06□□□□□ -1.92
CALD1-224ENST00000498254 CPXM1Q96SM3 734 aa3.06□□□□□ -1.92
CALD1-224ENST00000498254 RPP25Q9BUL9 199 aaKnown RBP3.06□□□□□ -1.92
CALD1-224ENST00000498254 STRADBQ9C0K7 418 aa3.06□□□□□ -1.92
CALD1-224ENST00000498254 SLC7A5P2Q9GIP4 190 aa3.06□□□□□ -1.92
CALD1-224ENST00000498254 POLR1EQ9GZS1 481 aaKnown RBP3.06□□□□□ -1.92
CALD1-224ENST00000498254 RHOJQ9H4E5 214 aa3.06□□□□□ -1.92
CALD1-224ENST00000498254 MEAF6Q9HAF1 191 aa3.06□□□□□ -1.92
CALD1-224ENST00000498254 DUS2Q9NX74 493 aaKnown RBP3.06□□□□□ -1.92
CALD1-224ENST00000498254 THEGQ9P2T0 379 aa3.06□□□□□ -1.92
CALD1-224ENST00000498254 PURGQ9UJV8 347 aaKnown RBP3.06□□□□□ -1.92
CALD1-224ENST00000498254 CFAP45Q9UL16 551 aa3.06□□□□□ -1.92
CALD1-224ENST00000498254 MGAT4AQ9UM21 535 aa3.06□□□□□ -1.92
CALD1-224ENST00000498254 AP4B1Q9Y6B7 739 aa3.06□□□□□ -1.92
CALD1-224ENST00000498254 V9GYY5 206 aaPredicted RBP3.06□□□□□ -1.92
CALD1-224ENST00000498254 CUX2O14529 1486 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 A0A0A6YYD4 124 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 TEX48A0A1B0GUV7 120 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 FAM74A7A6NL05 159 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 FAM25EA8MYX2 175 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.05□□□□□ -1.92
CALD1-224ENST00000498254 PDHXO00330 501 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 NR5A2O00482 541 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 TFECO14948 347 aaPredicted RBP3.05□□□□□ -1.92
CALD1-224ENST00000498254 OR1F1O43749 312 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 PDE5AO76074 875 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 SNX4O95219 450 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 IGLV1-44P01699 117 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 CHRNA1P02708 482 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 SP1P08047 785 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 CFC1BP0CG36 223 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 CFC1P0CG37 223 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 UQCRBP14927 111 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 FOSL2P15408 326 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 CAPN2P17655 700 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 PBLDP30039 288 aaPredicted RBP3.05□□□□□ -1.92
CALD1-224ENST00000498254 SAA4P35542 130 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 MAGEA8P43361 318 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 VCPP55072 806 aaKnown RBP3.05□□□□□ -1.92
CALD1-224ENST00000498254 OSTNP61366 133 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 GSTO1P78417 241 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 FKBP3Q00688 224 aaKnown RBP3.05□□□□□ -1.92
CALD1-224ENST00000498254 SPIBQ01892 262 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 MRPL28Q13084 256 aaKnown RBP3.05□□□□□ -1.92
CALD1-224ENST00000498254 GPM6BQ13491 265 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 FASTKQ14296 549 aaKnown RBP3.05□□□□□ -1.92
CALD1-224ENST00000498254 UBE2V2Q15819 145 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 CDKN3Q16667 212 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 DCAF4L1Q3SXM0 396 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 RABL6Q3YEC7 729 aaPredicted RBP3.05□□□□□ -1.92
CALD1-224ENST00000498254 LINC01620Q4KN68 170 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 FAM74A3Q4VXF1 159 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 ACER2Q5QJU3 275 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 AGAP7PQ5VUJ5 663 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 RHBDD2Q6NTF9 364 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 KCNIP4Q6PIL6 250 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 C3P1Q6ZMU1 363 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 NUFIP2Q7Z417 695 aaKnown RBP3.05□□□□□ -1.92
CALD1-224ENST00000498254 NET1Q7Z628 596 aaPredicted RBP3.05□□□□□ -1.92
CALD1-224ENST00000498254 VPS36Q86VN1 386 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 C9orf106Q8NAJ2 232 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 SUMF1Q8NBK3 374 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.05□□□□□ -1.92
CALD1-224ENST00000498254 RPL3LQ92901 407 aaKnown RBP3.05□□□□□ -1.92
CALD1-224ENST00000498254 ART4Q93070 314 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 NABP1Q96AH0 204 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 AKR1E2Q96JD6 320 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 AGAP4Q96P64 663 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 SLC39A3Q9BRY0 314 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 GPR174Q9BXC1 333 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 TBC1D10AQ9BXI6 508 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 GON7Q9BXV9 100 aa3.05□□□□□ -1.92
CALD1-224ENST00000498254 NT5C3AQ9H0P0 336 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms