RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 GRAP2O75791 330 aa3.85□□□□□ -1.79
MDM2-220ENST00000496959 PIGRP01833 764 aa3.85□□□□□ -1.79
MDM2-220ENST00000496959 LGALS2P05162 132 aa3.85□□□□□ -1.79
MDM2-220ENST00000496959 SMIM10L2AP0DMW4 78 aa3.85□□□□□ -1.79
MDM2-220ENST00000496959 SMIM10L2BP0DMW5 78 aa3.85□□□□□ -1.79
MDM2-220ENST00000496959 MX1P20591 662 aa3.85□□□□□ -1.79
MDM2-220ENST00000496959 SRD5A2P31213 254 aa3.85□□□□□ -1.79
MDM2-220ENST00000496959 NBL1P41271 181 aa3.85□□□□□ -1.79
MDM2-220ENST00000496959 BRCC3P46736 316 aa3.85□□□□□ -1.79
MDM2-220ENST00000496959 NPY4RP50391 375 aa3.85□□□□□ -1.79
MDM2-220ENST00000496959 CEACAM7Q14002 265 aa3.85□□□□□ -1.79
MDM2-220ENST00000496959 GPNMBQ14956 572 aa3.85□□□□□ -1.79
MDM2-220ENST00000496959 USH1GQ495M9 461 aa3.85□□□□□ -1.79
MDM2-220ENST00000496959 TTC31Q49AM3 519 aaPredicted RBP3.85□□□□□ -1.79
MDM2-220ENST00000496959 C4orf19Q8IY42 314 aa3.85□□□□□ -1.79
MDM2-220ENST00000496959 ZNF781Q8N8C0 355 aa3.85□□□□□ -1.79
MDM2-220ENST00000496959 CENPOQ9BU64 300 aa3.85□□□□□ -1.79
MDM2-220ENST00000496959 S100A14Q9HCY8 104 aa3.85□□□□□ -1.79
MDM2-220ENST00000496959 CLIC5Q9NZA1 410 aa3.85□□□□□ -1.79
MDM2-220ENST00000496959 IKZF3Q9UKT9 509 aa3.85□□□□□ -1.79
MDM2-220ENST00000496959 FBXO7Q9Y3I1 522 aa3.85□□□□□ -1.79
MDM2-220ENST00000496959 CACNA1BQ00975 2339 aa3.85□□□□□ -1.79
MDM2-220ENST00000496959 CHD9Q3L8U1 2897 aa3.85□□□□□ -1.79
MDM2-220ENST00000496959 DENND4AQ7Z401 1863 aa3.85□□□□□ -1.79
MDM2-220ENST00000496959 CACNA1AO00555 2505 aa3.84□□□□□ -1.79
MDM2-220ENST00000496959 MIA3Q5JRA6 1907 aa3.84□□□□□ -1.79
MDM2-220ENST00000496959 FAM220BPB1ANY3 271 aa3.84□□□□□ -1.79
MDM2-220ENST00000496959 HIP1O00291 1037 aa3.84□□□□□ -1.79
MDM2-220ENST00000496959 P2RX6O15547 441 aa3.84□□□□□ -1.79
MDM2-220ENST00000496959 ACSL4O60488 711 aa3.84□□□□□ -1.79
MDM2-220ENST00000496959 EIF5BO60841 1220 aaKnown RBP3.84□□□□□ -1.79
MDM2-220ENST00000496959 POLR2MP0CAP2 368 aa3.84□□□□□ -1.79
MDM2-220ENST00000496959 ZNF19P17023 458 aa3.84□□□□□ -1.79
MDM2-220ENST00000496959 ZBTB25P24278 435 aa3.84□□□□□ -1.79
MDM2-220ENST00000496959 SLC26A2P50443 739 aa3.84□□□□□ -1.79
MDM2-220ENST00000496959 CAPZA1P52907 286 aa3.84□□□□□ -1.79
MDM2-220ENST00000496959 ADARP55265 1226 aaKnown RBP3.84□□□□□ -1.79
MDM2-220ENST00000496959 SNAP25P60880 206 aa3.84□□□□□ -1.79
MDM2-220ENST00000496959 GIT2Q14161 759 aa3.84□□□□□ -1.79
MDM2-220ENST00000496959 CAPRIN1Q14444 709 aaKnown RBP3.84□□□□□ -1.79
MDM2-220ENST00000496959 PCK2Q16822 640 aa3.84□□□□□ -1.79
MDM2-220ENST00000496959 NEPROQ6NW34 567 aa3.84□□□□□ -1.79
MDM2-220ENST00000496959 TMEM184AQ6ZMB5 413 aa3.84□□□□□ -1.79
MDM2-220ENST00000496959 STOX1Q6ZVD7 989 aa3.84□□□□□ -1.79
MDM2-220ENST00000496959 TMCO2Q7Z6W1 182 aaPredicted RBP3.84□□□□□ -1.79
MDM2-220ENST00000496959 NLRP14Q86W24 1093 aa3.84□□□□□ -1.79
MDM2-220ENST00000496959 ANKRD46Q86W74 232 aa3.84□□□□□ -1.79
MDM2-220ENST00000496959 SIPA1Q96FS4 1042 aa3.84□□□□□ -1.79
MDM2-220ENST00000496959 ZNF274Q96GC6 653 aaPredicted RBP3.84□□□□□ -1.79
MDM2-220ENST00000496959 LINC00167Q96N53 147 aa3.84□□□□□ -1.79
MDM2-220ENST00000496959 KRT23Q9C075 422 aa3.84□□□□□ -1.79
MDM2-220ENST00000496959 MFSD1Q9H3U5 465 aa3.84□□□□□ -1.79
MDM2-220ENST00000496959 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.84□□□□□ -1.79
MDM2-220ENST00000496959 FRMPD4Q14CM0 1322 aa3.84□□□□□ -1.79
MDM2-220ENST00000496959 FER1L5A0AVI2 2057 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 BAZ2BQ9UIF8 2168 aaKnown RBP3.83□□□□□ -1.8
MDM2-220ENST00000496959 TRAV9-2A0A087WT02 112 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 ERICH2A1L162 156 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 MBLAC1A4D2B0 266 aaPredicted RBP3.83□□□□□ -1.8
MDM2-220ENST00000496959 HTR3EA5X5Y0 456 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 ZBTB5O15062 677 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 NMT2O60551 498 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 SKILP12757 684 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 SCG2P13521 617 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 OR3A1P47881 315 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 ZNF41P51814 821 aaPredicted RBP3.83□□□□□ -1.8
MDM2-220ENST00000496959 MRPS6P82932 125 aaKnown RBP3.83□□□□□ -1.8
MDM2-220ENST00000496959 TRDNQ13061 729 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 GPR50Q13585 617 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 CRMP1Q14194 572 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 LTB4RQ15722 352 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 IMMTQ16891 758 aaKnown RBP3.83□□□□□ -1.8
MDM2-220ENST00000496959 QRICH1Q2TAL8 776 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 HSDL1Q3SXM5 330 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 RFWD3Q6PCD5 774 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 PAMR1Q6UXH9 720 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 TMEM64Q6YI46 380 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 ZNF600Q6ZNG1 722 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 VASH2Q86V25 355 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 CREBRFQ8IUR6 639 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 THNSL1Q8IYQ7 743 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 LRRC43Q8N309 656 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 RNF149Q8NC42 400 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 BSCL2Q96G97 398 aaPredicted RBP3.83□□□□□ -1.8
MDM2-220ENST00000496959 RPGRIP1Q96KN7 1286 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 TAAR1Q96RJ0 339 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 MRPL9Q9BYD2 267 aaKnown RBP3.83□□□□□ -1.8
MDM2-220ENST00000496959 AZI2Q9H6S1 392 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 DCTPP1Q9H773 170 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 MED17Q9NVC6 651 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 ARMCX1Q9P291 453 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 RSPH14Q9UHP6 348 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 ANAPC5Q9UJX4 755 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 IGSF9BQ9UPX0 1349 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 COL1A2P08123 1366 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 GVINP1Q7Z2Y8 2422 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 SPTBN4Q9H254 2564 aa3.83□□□□□ -1.8
MDM2-220ENST00000496959 ILVBLA1L0T0 632 aa3.82□□□□□ -1.8
MDM2-220ENST00000496959 OR5H15A6NDH6 313 aa3.82□□□□□ -1.8
MDM2-220ENST00000496959 C5orf52A6NGY3 159 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms