RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 SEBOXQ9HB31 216 aaPredicted RBP2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 FZD3Q9NPG1 666 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 YAE1D1Q9NRH1 226 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 GSKIPQ9P0R6 139 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 PTGFRNQ9P2B2 879 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 LRIT1Q9P2V4 623 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 CLEC4EQ9ULY5 219 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 NENFQ9UMX5 172 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 PPP1R3CQ9UQK1 317 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 ABCA5Q8WWZ7 1642 aa2.92□□□□□ -1.94
SNRNP48-202ENST00000496946 CCDC187A0A096LP49 1063 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 A0A1B0GVM2 712 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 POC1B-GALNT4F8VUJ3 575 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 TEX46H3BTG2 121 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 PSMD12O00232 456 aaPredicted RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 BCKDKO14874 412 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 PSTPIP1O43586 416 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 SPRY1O43609 319 aaPredicted RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 ZNF780AO75290 641 aaPredicted RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 PMPCBO75439 489 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 RBMXL2O75526 392 aaKnown RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 B3GAT3O94766 335 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 OR2C1O95371 312 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 ENO1P06733 434 aaKnown RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 APRTP07741 180 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 MUC1P15941 1255 aaPredicted RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 ZNF25P17030 456 aaPredicted RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 AGAP20933 346 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 GSTM3P21266 225 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 BGNP21810 368 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 ATP5A1P25705 553 aaKnown RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 GABRB3P28472 473 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 PRDX6P30041 224 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 PRDX5P30044 214 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 JAK3P52333 1124 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 PLA2G16P53816 162 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 ELLP55199 621 aaPredicted RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 SNU13P55769 128 aaKnown RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 UCP2P55851 309 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 TMEM33P57088 247 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 C1QTNF8P60827 252 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 RPS15P62841 145 aaKnown RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 TXNL4AP83876 142 aaKnown RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 IRF8Q02556 426 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 SLAMF1Q13291 335 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 APOFQ13790 326 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 IL11RAQ14626 422 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 PTPRCAPQ14761 206 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 TAF1AQ15573 450 aaPredicted RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 TAB1Q15750 504 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 PSMD5Q16401 504 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 EXOC3L4Q17RC7 722 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 KNOP1Q1ED39 458 aaKnown RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 SOWAHAQ2M3V2 549 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 KIF19Q2TAC6 998 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 PRICKLE4Q2TBC4 344 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 DEFB115Q30KQ5 88 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 BSXQ3C1V8 233 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 PDLIM3Q53GG5 364 aaPredicted RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 AKIRIN2Q53H80 203 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 RNASE10Q5GAN6 216 aaKnown RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 CERCAMQ5T4B2 595 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 DCUN1D2Q6PH85 259 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 INO80CQ6PI98 192 aaPredicted RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 NCEH1Q6PIU2 408 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 BTNL3Q6UXE8 466 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 CLEC14AQ86T13 490 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 ECHDC2Q86YB7 292 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 PARP8Q8N3A8 854 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 C12orf76Q8N812 135 aaPredicted RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 CDYL2Q8N8U2 506 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 OR5M3Q8NGP4 307 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 OR10T2Q8NGX3 314 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 OR2L2Q8NH16 312 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 TBC1D16Q8TBP0 767 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 ASB5Q8WWX0 329 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 ARNTL2Q8WYA1 636 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 HAS1Q92839 578 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 CDS1Q92903 461 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 HGDQ93099 445 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 SPSB1Q96BD6 273 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 IGSF21Q96ID5 467 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 KLHL32Q96NJ5 620 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 OR5B2Q96R09 309 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 SLC22A12Q96S37 553 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 PAFAH2Q99487 392 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 PARK7Q99497 189 aaKnown RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 KLF6Q99612 283 aaPredicted RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 NIPSNAP1Q9BPW8 284 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 SRSF8Q9BRL6 282 aaKnown RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 SYT17Q9BSW7 474 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 ING2Q9H160 280 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 TMEM185BQ9H7F4 350 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 GEMIN7Q9H840 131 aaKnown RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 MED20Q9H944 212 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 MYNNQ9NPC7 610 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 FAM118AQ9NWS6 357 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 ANKFY1Q9P2R3 1169 aa2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 SAE1Q9UBE0 346 aaPredicted RBP2.91□□□□□ -1.94
SNRNP48-202ENST00000496946 XPR1Q9UBH6 696 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms