RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 VTNP04004 478 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 RHOP08100 348 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 ANKRD34CP0C6C1 535 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 SLC35G4P0C7Q5 338 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 ZNF888P0CJ79 500 aaPredicted RBP6.49□□□□□ -1.37
VPS13B-205ENST00000493587 IFNGR1P15260 489 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 HOXC8P31273 242 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 FEN1P39748 380 aaKnown RBP6.49□□□□□ -1.37
VPS13B-205ENST00000493587 SRP9P49458 86 aaKnown RBP6.49□□□□□ -1.37
VPS13B-205ENST00000493587 RGS4P49798 205 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 RAB10P61026 200 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 CTBP1Q13363 440 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 ST3GAL2Q16842 350 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 RNF165Q6ZSG1 346 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 PDZD4Q76G19 769 aaPredicted RBP6.49□□□□□ -1.37
VPS13B-205ENST00000493587 FGD2Q7Z6J4 655 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 TRAM1L1Q8N609 369 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 PCSK9Q8NBP7 692 aaKnown RBP6.49□□□□□ -1.37
VPS13B-205ENST00000493587 B3GNT7Q8NFL0 401 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 OR56A3Q8NH54 315 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 ST7LQ8TDW4 575 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 THAP3Q8WTV1 239 aaPredicted RBP6.49□□□□□ -1.37
VPS13B-205ENST00000493587 EMID1Q96A84 441 aaPredicted RBP6.49□□□□□ -1.37
VPS13B-205ENST00000493587 SLC25A46Q96AG3 418 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 TGM7Q96PF1 710 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 F2RL3Q96RI0 385 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 THAP7Q9BT49 309 aaPredicted RBP6.49□□□□□ -1.37
VPS13B-205ENST00000493587 KATNB1Q9BVA0 655 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 RPS10P5Q9NQ39 176 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 SMCO4Q9NRQ5 59 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 LANCL2Q9NS86 450 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 PCDHB7Q9Y5E2 793 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 SCN8AQ9UQD0 1980 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 PLSCR5A0PG75 271 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 GSAPA4D1B5 854 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 SLC35F4A4IF30 521 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 NPIPA7E9PJI5 369 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 TNFRSF10BO14763 440 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 TOX3O15405 576 aaPredicted RBP6.49□□□□□ -1.37
VPS13B-205ENST00000493587 TCF21O43680 179 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 MSCO60682 206 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 C22orf31O95567 290 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 TRUB2O95900 331 aaKnown RBP6.49□□□□□ -1.37
VPS13B-205ENST00000493587 IGF2P01344 180 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 INHAP05111 366 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 THBS1P07996 1170 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 UBCP0CG48 685 aaKnown RBP6.49□□□□□ -1.37
VPS13B-205ENST00000493587 NPIPA8P0DM63 369 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 BMP8BP34820 402 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 ADH7P40394 386 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 SPHARQ15513 63 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 TOMM34Q15785 309 aaPredicted RBP6.49□□□□□ -1.37
VPS13B-205ENST00000493587 KCNA10Q16322 511 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 SSX1Q16384 188 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 FAM102BQ5T8I3 360 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 TPGS2Q68CL5 300 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 OR5M10Q6IEU7 315 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 LPCAT3Q6P1A2 487 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 LINGO2Q7L985 606 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 BMP8AQ7Z5Y6 402 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 SLITRK4Q8IW52 837 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 EIF4E3Q8N5X7 224 aaKnown RBP6.49□□□□□ -1.37
VPS13B-205ENST00000493587 OR2L8Q8NGY9 312 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 NEK7Q8TDX7 302 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 SLC25A36Q96CQ1 311 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 THOC3Q96J01 351 aaKnown RBP6.49□□□□□ -1.37
VPS13B-205ENST00000493587 ZFP3Q96NJ6 502 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 SLC6A16Q9GZN6 736 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 PORCNQ9H237 461 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 TMEM134Q9H6X4 195 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 APOBEC3GQ9HC16 384 aaKnown RBP6.49□□□□□ -1.37
VPS13B-205ENST00000493587 FAM86C1Q9NVL1 165 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 TMEM248Q9NWD8 314 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 GNG8Q9UK08 70 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 GAB2Q9UQC2 676 aa6.49□□□□□ -1.37
VPS13B-205ENST00000493587 GPR55Q9Y2T6 319 aaPredicted RBP6.49□□□□□ -1.37
VPS13B-205ENST00000493587 SPIN1Q9Y657 262 aaPredicted RBP6.49□□□□□ -1.37
VPS13B-205ENST00000493587 A0A087WZ62 844 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 MDM4O15151 490 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 EFCAB14O75071 495 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 FZD7O75084 574 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 LATS1O95835 1130 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 HOXC4P09017 264 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-205ENST00000493587 SBK3P0C264 359 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 OR4E1P0C645 316 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 SLC35E2BP0CK96 405 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 GABRA1P14867 456 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 ZNF44P15621 663 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 FPR1P21462 350 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 CERS1P27544 350 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 SLC6A1P30531 599 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 HOXC12P31275 282 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 DNAJA1P31689 397 aaKnown RBP6.48□□□□□ -1.37
VPS13B-205ENST00000493587 NFKB2Q00653 900 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 SYTL3Q4VX76 610 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 PCID2Q5JVF3 399 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 FAM46CQ5VWP2 391 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 CPZQ66K79 652 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 LIN54Q6MZP7 749 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 GDPD4Q6W3E5 623 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms