RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 PCNX3Q9H6A9 2034 aa16.72■□□□□ 0.27
HDAC6-231ENST00000488905 TRIM49D1C9J1S8 452 aa16.72■□□□□ 0.27
HDAC6-231ENST00000488905 OR4F21O95013 312 aa16.72■□□□□ 0.27
HDAC6-231ENST00000488905 ESRRBO95718 433 aa16.72■□□□□ 0.27
HDAC6-231ENST00000488905 HRGP04196 525 aa16.72■□□□□ 0.27
HDAC6-231ENST00000488905 HSD3B1P14060 373 aa16.72■□□□□ 0.27
HDAC6-231ENST00000488905 HSD3B2P26439 372 aa16.72■□□□□ 0.27
HDAC6-231ENST00000488905 SRD5A2P31213 254 aa16.72■□□□□ 0.27
HDAC6-231ENST00000488905 LHX2P50458 406 aa16.72■□□□□ 0.27
HDAC6-231ENST00000488905 CSTF3Q12996 717 aaKnown RBP16.72■□□□□ 0.27
HDAC6-231ENST00000488905 TCHHL1Q5QJ38 904 aaPredicted RBP16.72■□□□□ 0.27
HDAC6-231ENST00000488905 SCIMPQ6UWF3 145 aa16.72■□□□□ 0.27
HDAC6-231ENST00000488905 DCAKDQ8WVC6 231 aa16.72■□□□□ 0.27
HDAC6-231ENST00000488905 WNT2BQ93097 391 aa16.72■□□□□ 0.27
HDAC6-231ENST00000488905 INTS12Q96CB8 462 aaKnown RBP16.72■□□□□ 0.27
HDAC6-231ENST00000488905 ERP27Q96DN0 273 aa16.72■□□□□ 0.27
HDAC6-231ENST00000488905 DTNBP1Q96EV8 351 aa16.72■□□□□ 0.27
HDAC6-231ENST00000488905 DACH2Q96NX9 599 aa16.72■□□□□ 0.27
HDAC6-231ENST00000488905 GSX1Q9H4S2 264 aaPredicted RBP16.72■□□□□ 0.27
HDAC6-231ENST00000488905 ANKRA2Q9H9E1 313 aa16.72■□□□□ 0.27
HDAC6-231ENST00000488905 MCM8Q9UJA3 840 aa16.72■□□□□ 0.27
HDAC6-231ENST00000488905 ZNF180Q9UJW8 692 aa16.72■□□□□ 0.27
HDAC6-231ENST00000488905 FBXL2Q9UKC9 423 aa16.72■□□□□ 0.27
HDAC6-231ENST00000488905 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.72■□□□□ 0.27
HDAC6-231ENST00000488905 SH3D21A4FU49 640 aa16.71■□□□□ 0.27
HDAC6-231ENST00000488905 POC1B-GALNT4F8VUJ3 575 aa16.71■□□□□ 0.27
HDAC6-231ENST00000488905 PLOD2O00469 737 aa16.71■□□□□ 0.27
HDAC6-231ENST00000488905 REM1O75628 298 aa16.71■□□□□ 0.27
HDAC6-231ENST00000488905 BCAS2O75934 225 aaPredicted RBP16.71■□□□□ 0.27
HDAC6-231ENST00000488905 IL3P08700 152 aa16.71■□□□□ 0.27
HDAC6-231ENST00000488905 CT45A8P0DMV1 189 aa16.71■□□□□ 0.27
HDAC6-231ENST00000488905 CT45A9P0DMV2 189 aa16.71■□□□□ 0.27
HDAC6-231ENST00000488905 CORO7P57737 925 aa16.71■□□□□ 0.27
HDAC6-231ENST00000488905 CLCQ05315 142 aa16.71■□□□□ 0.27
HDAC6-231ENST00000488905 POU4F3Q15319 338 aa16.71■□□□□ 0.27
HDAC6-231ENST00000488905 CT45A2Q5DJT8 189 aa16.71■□□□□ 0.27
HDAC6-231ENST00000488905 AAGABQ6PD74 315 aa16.71■□□□□ 0.27
HDAC6-231ENST00000488905 TMEM151AQ8N4L1 468 aa16.71■□□□□ 0.27
HDAC6-231ENST00000488905 CDYL2Q8N8U2 506 aa16.71■□□□□ 0.27
HDAC6-231ENST00000488905 GBP7Q8N8V2 638 aaPredicted RBP16.71■□□□□ 0.27
HDAC6-231ENST00000488905 WFDC11Q8NEX6 87 aa16.71■□□□□ 0.27
HDAC6-231ENST00000488905 OR9A2Q8NGT5 310 aa16.71■□□□□ 0.27
HDAC6-231ENST00000488905 VSTM2LQ96N03 204 aa16.71■□□□□ 0.27
HDAC6-231ENST00000488905 SFXN2Q96NB2 322 aa16.71■□□□□ 0.27
HDAC6-231ENST00000488905 ADOQ96SZ5 270 aa16.71■□□□□ 0.27
HDAC6-231ENST00000488905 FMO2Q99518 471 aa16.71■□□□□ 0.27
HDAC6-231ENST00000488905 TSPYL1Q9H0U9 437 aa16.71■□□□□ 0.27
HDAC6-231ENST00000488905 PIGMQ9H3S5 423 aa16.71■□□□□ 0.27
HDAC6-231ENST00000488905 DKKL1Q9UK85 242 aa16.71■□□□□ 0.27
HDAC6-231ENST00000488905 MANBAO00462 879 aa16.7■□□□□ 0.26
HDAC6-231ENST00000488905 PCDH7O60245 1069 aa16.7■□□□□ 0.26
HDAC6-231ENST00000488905 TSPAN2O60636 221 aa16.7■□□□□ 0.26
HDAC6-231ENST00000488905 KRT6AP02538 564 aa16.7■□□□□ 0.26
HDAC6-231ENST00000488905 KRT6BP04259 564 aa16.7■□□□□ 0.26
HDAC6-231ENST00000488905 CHMP24386 653 aa16.7■□□□□ 0.26
HDAC6-231ENST00000488905 IL12BP29460 328 aa16.7■□□□□ 0.26
HDAC6-231ENST00000488905 KRT20P35900 424 aa16.7■□□□□ 0.26
HDAC6-231ENST00000488905 HSD17B3P37058 310 aa16.7■□□□□ 0.26
HDAC6-231ENST00000488905 KRT6CP48668 564 aa16.7■□□□□ 0.26
HDAC6-231ENST00000488905 STARP49675 285 aa16.7■□□□□ 0.26
HDAC6-231ENST00000488905 CLDN18P56856 261 aa16.7■□□□□ 0.26
HDAC6-231ENST00000488905 PSPHP78330 225 aa16.7■□□□□ 0.26
HDAC6-231ENST00000488905 EFR3AQ14156 821 aa16.7■□□□□ 0.26
HDAC6-231ENST00000488905 RASA2Q15283 850 aa16.7■□□□□ 0.26
HDAC6-231ENST00000488905 ERCC6LQ2NKX8 1250 aa16.7■□□□□ 0.26
HDAC6-231ENST00000488905 NPSR1Q6W5P4 371 aa16.7■□□□□ 0.26
HDAC6-231ENST00000488905 GRAMD2AQ8IUY3 354 aa16.7■□□□□ 0.26
HDAC6-231ENST00000488905 CCDC116Q8IYX3 515 aa16.7■□□□□ 0.26
HDAC6-231ENST00000488905 SAMD14Q8IZD0 417 aaPredicted RBP16.7■□□□□ 0.26
HDAC6-231ENST00000488905 RNF138Q8WVD3 245 aa16.7■□□□□ 0.26
HDAC6-231ENST00000488905 SMPDL3BQ92485 455 aa16.7■□□□□ 0.26
HDAC6-231ENST00000488905 KAT2AQ92830 837 aa16.7■□□□□ 0.26
HDAC6-231ENST00000488905 EXOSC8Q96B26 276 aaKnown RBP16.7■□□□□ 0.26
HDAC6-231ENST00000488905 ZNF382Q96SR6 550 aa16.7■□□□□ 0.26
HDAC6-231ENST00000488905 PACSIN3Q9UKS6 424 aa16.7■□□□□ 0.26
HDAC6-231ENST00000488905 DLGAP4Q9Y2H0 992 aa16.7■□□□□ 0.26
HDAC6-231ENST00000488905 GNG14A0A1W2PPG7 69 aa16.69■□□□□ 0.26
HDAC6-231ENST00000488905 A0A1W2PPR1 153 aa16.69■□□□□ 0.26
HDAC6-231ENST00000488905 B4DXG7 233 aa16.69■□□□□ 0.26
HDAC6-231ENST00000488905 HCRTR2O43614 444 aa16.69■□□□□ 0.26
HDAC6-231ENST00000488905 NME6O75414 186 aaPredicted RBP16.69■□□□□ 0.26
HDAC6-231ENST00000488905 DRD2P14416 443 aa16.69■□□□□ 0.26
HDAC6-231ENST00000488905 CHN1P15882 459 aa16.69■□□□□ 0.26
HDAC6-231ENST00000488905 ZNF708P17019 499 aa16.69■□□□□ 0.26
HDAC6-231ENST00000488905 TCEA1P23193 301 aaKnown RBP16.69■□□□□ 0.26
HDAC6-231ENST00000488905 GRK2P25098 689 aa16.69■□□□□ 0.26
HDAC6-231ENST00000488905 CPOXP36551 454 aa16.69■□□□□ 0.26
HDAC6-231ENST00000488905 DIO3P55073 304 aa16.69■□□□□ 0.26
HDAC6-231ENST00000488905 RAE1P78406 368 aaKnown RBP16.69■□□□□ 0.26
HDAC6-231ENST00000488905 GAB1Q13480 694 aa16.69■□□□□ 0.26
HDAC6-231ENST00000488905 SPIN4Q56A73 249 aa16.69■□□□□ 0.26
HDAC6-231ENST00000488905 ZNF678Q5SXM1 525 aa16.69■□□□□ 0.26
HDAC6-231ENST00000488905 TEX35Q5T0J7 233 aa16.69■□□□□ 0.26
HDAC6-231ENST00000488905 OR5M10Q6IEU7 315 aa16.69■□□□□ 0.26
HDAC6-231ENST00000488905 LARP4Q71RC2 724 aaKnown RBP eCLIP16.69■□□□□ 0.26
HDAC6-231ENST00000488905 TMEM237Q96Q45 408 aa16.69■□□□□ 0.26
HDAC6-231ENST00000488905 ACPTQ9BZG2 426 aa16.69■□□□□ 0.26
HDAC6-231ENST00000488905 FOLH1BQ9HBA9 442 aa16.69■□□□□ 0.26
HDAC6-231ENST00000488905 GIMAP4Q9NUV9 329 aa16.69■□□□□ 0.26
HDAC6-231ENST00000488905 DMGDHQ9UI17 866 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms