RNA–Protein interactions for RNA: ENST00000485962.5

SGSM3-213, Transcript of small G protein signaling modulator 3, human

TSL 5

Gene SGSM3, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGSM3-213	ENST00000485962	OTUB1	Q96FW1	271 aa	Predicted RBP	11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	RADIL	Q96JH8	1075 aa		11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	ZNF354B	Q96LW1	612 aa		11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	NEDD4L	Q96PU5	975 aa		11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	MENT	Q9BUN1	341 aa		11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	CTPS2	Q9NRF8	586 aa		11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	TMEM39A	Q9NV64	488 aa		11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	NUP50	Q9UKX7	468 aa		11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	KLHL20	Q9Y2M5	609 aa		11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	LSM2	Q9Y333	95 aa	Known RBP	11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	HEATR5B	Q9P2D3	2071 aa		11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962		M0R3H8	397 aa		11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	AGRP	O00253	132 aa		11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	TFEC	O14948	347 aa	Predicted RBP	11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	FKTN	O75072	461 aa		11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	CDRT1	O95170	752 aa		11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	OR12D1	P0DN82	309 aa		11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	C6	P13671	934 aa		11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	TRHR	P34981	398 aa	Predicted RBP	11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	OPRD1	P41143	372 aa		11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	NTHL1	P78549	312 aa		11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	NCF4	Q15080	339 aa		11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	OLIG3	Q7RTU3	272 aa		11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	ZSCAN1	Q8NBB4	408 aa		11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	OR5D16	Q8NGK9	328 aa		11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	OR6S1	Q8NH40	331 aa		11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	ING5	Q8WYH8	240 aa		11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	SMPDL3A	Q92484	453 aa		11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	VWCE	Q96DN2	955 aa		11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	HHIPL1	Q96JK4	782 aa		11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	OR2A14	Q96R47	310 aa		11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	RSPO3	Q9BXY4	272 aa	Predicted RBP	11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	CUEDC1	Q9NWM3	386 aa	Predicted RBP	11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	MUTYH	Q9UIF7	546 aa		11.64	□□□□□ -0.55
SGSM3-213	ENST00000485962	TCF20	Q9UGU0	1960 aa	Known RBP	11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962		A0A0X1KG70	313 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	ABHD14A-ACY1	A0A1B0GW23	586 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	HMGN4	O00479	90 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	CAPN5	O15484	640 aa	Predicted RBP	11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	RHO	P08100	348 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	NR2F1	P10589	423 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	KEL	P23276	732 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	CRYBB2	P43320	205 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	CCT3	P49368	545 aa	Known RBP	11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	VASP	P50552	380 aa	Predicted RBP	11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	AP2S1	P53680	142 aa	Predicted RBP	11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	SEC13	P55735	322 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	CARD18	P57730	90 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	MADCAM1	Q13477	382 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	SYPL1	Q16563	259 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	NXNL2	Q5VZ03	156 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	LCTL	Q6UWM7	567 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	ZNF517	Q6ZMY9	492 aa	Predicted RBP	11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	ANKRD33	Q7Z3H0	272 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	ADCK2	Q7Z695	626 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	FAM129C	Q86XR2	697 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962		Q8NFD4	153 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	ASB15	Q8WXK1	588 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	RAB7B	Q96AH8	199 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	SLC6A18	Q96N87	628 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	AIF1L	Q9BQI0	150 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	SAV1	Q9H4B6	383 aa	Predicted RBP	11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	UCK1	Q9HA47	277 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	FZD3	Q9NPG1	666 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	SH3BGRL2	Q9UJC5	107 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	SNX7	Q9UNH6	387 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	NOTCH4	Q99466	2003 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	TRBV23-1	A0A0A0MS06	115 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962		A8MV72	311 aa	Predicted RBP	11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	ZNF670-ZNF695	F2Z2N8	137 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	PRKY	O43930	277 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	B4GALT2	O60909	372 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	APOL3	O95236	402 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	PSMB5	P28074	263 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	ACADL	P28330	430 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	GALNS	P34059	522 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	PRKAG1	P54619	331 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	ZNF77	Q15935	545 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	PLPP4	Q5VZY2	271 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	C12orf73	Q69YU5	71 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	NANOGP1	Q8N7R0	232 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	OR2L2	Q8NH16	312 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	TFG	Q92734	400 aa	Predicted RBP	11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	ZBED6CL	Q96FA7	236 aa	Predicted RBP	11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	TREX2	Q9BQ50	279 aa	Predicted RBP	11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	FNDC11	Q9BVV2	318 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	TMEM245	Q9H330	911 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	DPEP2	Q9H4A9	486 aa		11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	TEX10	Q9NXF1	929 aa	Predicted RBP	11.63	□□□□□ -0.55
SGSM3-213	ENST00000485962	TP53BP1	Q12888	1972 aa	Predicted RBP	11.62	□□□□□ -0.55
SGSM3-213	ENST00000485962	SMIM30	A4D0T7	59 aa		11.62	□□□□□ -0.55
SGSM3-213	ENST00000485962	HEPACAM2	A8MVW5	462 aa		11.62	□□□□□ -0.55
SGSM3-213	ENST00000485962		H7BY64	318 aa		11.62	□□□□□ -0.55
SGSM3-213	ENST00000485962	AP3D1	O14617	1153 aa		11.62	□□□□□ -0.55
SGSM3-213	ENST00000485962	SERPINI2	O75830	405 aa		11.62	□□□□□ -0.55
SGSM3-213	ENST00000485962	PRNP	P04156	253 aa		11.62	□□□□□ -0.55
SGSM3-213	ENST00000485962	HTR3A	P46098	478 aa		11.62	□□□□□ -0.55
SGSM3-213	ENST00000485962	SMIM11A	P58511	58 aa		11.62	□□□□□ -0.55
SGSM3-213	ENST00000485962	WDR5	P61964	334 aa	Known RBP	11.62	□□□□□ -0.55
SGSM3-213	ENST00000485962	LGALS3BP	Q08380	585 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms