RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 FAM120CQ9NX05 1096 aaKnown RBP10.81□□□□□ -0.68
HPS4-212ENST00000481910 PCDHGB4Q9UN71 923 aa10.81□□□□□ -0.68
HPS4-212ENST00000481910 NCOR2Q9Y618 2525 aa10.81□□□□□ -0.68
HPS4-212ENST00000481910 A0A1W2PP18 115 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 SH3PXD2BA1X283 911 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 C17orf105B2RV13 164 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 SOCS6O14544 535 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 RRP8O43159 456 aaKnown RBP10.8□□□□□ -0.68
HPS4-212ENST00000481910 DYRK3O43781 588 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 SCN2BO60939 215 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 SNX4O95219 450 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 C6orf47O95873 294 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 HPGDP15428 266 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 CAPN3P20807 821 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 PTGER1P34995 402 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 GPC1P35052 558 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 EIF2S3P41091 472 aaKnown RBP10.8□□□□□ -0.68
HPS4-212ENST00000481910 PCYT1AP49585 367 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 ELAVL1Q15717 326 aaKnown RBP10.8□□□□□ -0.68
HPS4-212ENST00000481910 MAPKAPK3Q16644 382 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 CCNJQ5T5M9 372 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 UNQ6494/PRO21346Q6UXR6 183 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 DGAT2L6Q6ZPD8 337 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 RAB43Q86YS6 212 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 CLECL1Q8IZS7 167 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 FITM2Q8N6M3 262 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 ZNF565Q8N9K5 539 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 OR9A2Q8NGT5 310 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 DOK4Q8TEW6 326 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 TSPEARQ8WU66 669 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 PTPMT1Q8WUK0 201 aaPredicted RBP10.8□□□□□ -0.68
HPS4-212ENST00000481910 EME1Q96AY2 570 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 SLC47A1Q96FL8 570 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 LPAR4Q99677 370 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 SLC25A23Q9BV35 468 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 RMND5AQ9H871 391 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 SLC52A3Q9NQ40 469 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 MRPL39Q9NYK5 338 aaKnown RBP10.8□□□□□ -0.68
HPS4-212ENST00000481910 IFT52Q9Y366 437 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 NDUFAF1Q9Y375 327 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 ACACAQ13085 2346 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 URB1O60287 2271 aaKnown RBP10.8□□□□□ -0.68
HPS4-212ENST00000481910 LOC102723996A0A087X1L8 192 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 ANGPT2O15123 496 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 SLC22A1O15245 554 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 CPSF4O95639 269 aaKnown RBP10.8□□□□□ -0.68
HPS4-212ENST00000481910 PABPC4LP0CB38 370 aaKnown RBP10.8□□□□□ -0.68
HPS4-212ENST00000481910 GALNSP34059 522 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 PGDP52209 483 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 HBA1P69905 142 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 EEF1A2Q05639 463 aaKnown RBP10.8□□□□□ -0.68
HPS4-212ENST00000481910 ZNF267Q14586 743 aaPredicted RBP10.8□□□□□ -0.68
HPS4-212ENST00000481910 MLC1Q15049 377 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 LTB4RQ15722 352 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 ZNF124Q15973 351 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 PRICKLE4Q2TBC4 344 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 C6orf163Q5TEZ5 329 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 FOXB2Q5VYV0 432 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 CPZQ66K79 652 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 TRPM8Q7Z2W7 1104 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 PPP1R32Q7Z5V6 425 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 GALNT12Q8IXK2 581 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 OR11G2Q8NGC1 345 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 RP9Q8TA86 221 aaKnown RBP10.8□□□□□ -0.68
HPS4-212ENST00000481910 OR5P2Q8WZ92 322 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 DAZLQ92904 295 aaKnown RBP10.8□□□□□ -0.68
HPS4-212ENST00000481910 PANX1Q96RD7 426 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 CXorf21Q9HAI6 301 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 TAS2R9Q9NYW1 312 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 GTF2A1LQ9UNN4 478 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 SPEF1Q9Y4P9 236 aa10.8□□□□□ -0.68
HPS4-212ENST00000481910 APC2O95996 2303 aa10.79□□□□□ -0.68
HPS4-212ENST00000481910 IGHV1-45A0A0A0MS14 117 aa10.79□□□□□ -0.68
HPS4-212ENST00000481910 CDC14CA4D256 554 aa10.79□□□□□ -0.68
HPS4-212ENST00000481910 CAPN14A8MX76 684 aa10.79□□□□□ -0.68
HPS4-212ENST00000481910 PEX12O00623 359 aa10.79□□□□□ -0.68
HPS4-212ENST00000481910 NKX2-8O15522 239 aa10.79□□□□□ -0.68
HPS4-212ENST00000481910 WT1P19544 449 aaPredicted RBP10.79□□□□□ -0.68
HPS4-212ENST00000481910 PPP2R2BQ00005 443 aa10.79□□□□□ -0.68
HPS4-212ENST00000481910 MMEL1Q495T6 779 aa10.79□□□□□ -0.68
HPS4-212ENST00000481910 TRMT12Q53H54 448 aaKnown RBP10.79□□□□□ -0.68
HPS4-212ENST00000481910 C6orf10Q5SRN2 563 aa10.79□□□□□ -0.68
HPS4-212ENST00000481910 PAPD4Q6PIY7 484 aaKnown RBP10.79□□□□□ -0.68
HPS4-212ENST00000481910 FAM111BQ6SJ93 734 aa10.79□□□□□ -0.68
HPS4-212ENST00000481910 MSANTD1Q6ZTZ1 278 aa10.79□□□□□ -0.68
HPS4-212ENST00000481910 SPACA3Q8IXA5 215 aa10.79□□□□□ -0.68
HPS4-212ENST00000481910 POU5F2Q8N7G0 328 aa10.79□□□□□ -0.68
HPS4-212ENST00000481910 OR4A15Q8NGL6 344 aa10.79□□□□□ -0.68
HPS4-212ENST00000481910 OR14A16Q8NHC5 309 aa10.79□□□□□ -0.68
HPS4-212ENST00000481910 LILRB4Q8NHJ6 448 aa10.79□□□□□ -0.68
HPS4-212ENST00000481910 ADAMTS17Q8TE56 1095 aa10.79□□□□□ -0.68
HPS4-212ENST00000481910 RASSF5Q8WWW0 418 aa10.79□□□□□ -0.68
HPS4-212ENST00000481910 KAT2AQ92830 837 aa10.79□□□□□ -0.68
HPS4-212ENST00000481910 ITCHQ96J02 903 aa10.79□□□□□ -0.68
HPS4-212ENST00000481910 COX4I2Q96KJ9 171 aa10.79□□□□□ -0.68
HPS4-212ENST00000481910 IP6K3Q96PC2 410 aa10.79□□□□□ -0.68
HPS4-212ENST00000481910 CNPPD1Q9BV87 410 aa10.79□□□□□ -0.68
HPS4-212ENST00000481910 POLE3Q9NRF9 147 aa10.79□□□□□ -0.68
HPS4-212ENST00000481910 P4HTMQ9NXG6 502 aa10.79□□□□□ -0.68
HPS4-212ENST00000481910 BTNL2Q9UIR0 455 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms