RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 AFF2P51816 1311 aa4.6□□□□□ -1.67
SMC5-203ENST00000475540 TRABD2BA6NFA1 517 aa4.59□□□□□ -1.67
SMC5-203ENST00000475540 CCT8L1PA6NM43 557 aa4.59□□□□□ -1.67
SMC5-203ENST00000475540 TSC22D2O75157 780 aa4.59□□□□□ -1.67
SMC5-203ENST00000475540 NCF1P14598 390 aaPredicted RBP4.59□□□□□ -1.67
SMC5-203ENST00000475540 ZNF18P17022 549 aa4.59□□□□□ -1.67
SMC5-203ENST00000475540 ZNF19P17023 458 aa4.59□□□□□ -1.67
SMC5-203ENST00000475540 GDF1P27539 372 aa4.59□□□□□ -1.67
SMC5-203ENST00000475540 ELP6Q0PNE2 266 aa4.59□□□□□ -1.67
SMC5-203ENST00000475540 PPP1R8Q12972 351 aaKnown RBP4.59□□□□□ -1.67
SMC5-203ENST00000475540 KIF7Q2M1P5 1343 aa4.59□□□□□ -1.67
SMC5-203ENST00000475540 ACER2Q5QJU3 275 aa4.59□□□□□ -1.67
SMC5-203ENST00000475540 RIPPLY2Q5TAB7 128 aa4.59□□□□□ -1.67
SMC5-203ENST00000475540 KRTAP11-1Q8IUC1 163 aa4.59□□□□□ -1.67
SMC5-203ENST00000475540 RELL2Q8NC24 303 aaPredicted RBP4.59□□□□□ -1.67
SMC5-203ENST00000475540 SHC3Q92529 594 aa4.59□□□□□ -1.67
SMC5-203ENST00000475540 GLYATL1Q969I3 302 aa4.59□□□□□ -1.67
SMC5-203ENST00000475540 RAB7BQ96AH8 199 aa4.59□□□□□ -1.67
SMC5-203ENST00000475540 PHYHIPLQ96FC7 376 aa4.59□□□□□ -1.67
SMC5-203ENST00000475540 CCT8L2Q96SF2 557 aa4.59□□□□□ -1.67
SMC5-203ENST00000475540 PAXXQ9BUH6 204 aa4.59□□□□□ -1.67
SMC5-203ENST00000475540 TMEM245Q9H330 911 aa4.59□□□□□ -1.67
SMC5-203ENST00000475540 DCTPP1Q9H773 170 aa4.59□□□□□ -1.67
SMC5-203ENST00000475540 COQ10BQ9H8M1 238 aa4.59□□□□□ -1.67
SMC5-203ENST00000475540 TIGARQ9NQ88 270 aa4.59□□□□□ -1.67
SMC5-203ENST00000475540 RAI14Q9P0K7 980 aa4.59□□□□□ -1.67
SMC5-203ENST00000475540 CTNNA3Q9UI47 895 aa4.59□□□□□ -1.67
SMC5-203ENST00000475540 IKZF3Q9UKT9 509 aa4.59□□□□□ -1.67
SMC5-203ENST00000475540 KLF18A0A0U1RQI7 1052 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 EFCAB7A8K855 629 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 E7ENQ6 273 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 H0YCG3 227 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 TLR4O00206 839 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 CLDN3O15551 220 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 PGK2P07205 417 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 PRG2P13727 222 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 ZBTB25P24278 435 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 PEX19P40855 299 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 RGRP47804 291 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 SRP54P61011 504 aaKnown RBP4.58□□□□□ -1.68
SMC5-203ENST00000475540 RFTN1Q14699 578 aaPredicted RBP4.58□□□□□ -1.68
SMC5-203ENST00000475540 ZNF79Q15937 498 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 TAF3Q5VWG9 929 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 IRGCQ6NXR0 463 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 STEAP1BQ6NZ63 245 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 WDR88Q6ZMY6 472 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 GPR142Q7Z601 462 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 ADAMTSL2Q86TH1 951 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 TMEM185AQ8NFB2 350 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 CRYGNQ8WXF5 182 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 THRSPQ92748 146 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 RAB3CQ96E17 227 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 DTNBP1Q96EV8 351 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 FUNDC2Q9BWH2 189 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 CARD6Q9BX69 1037 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 ATG10Q9H0Y0 220 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 PDFQ9HBH1 243 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 SOHLH2Q9NX45 425 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 VNN3Q9NY84 501 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 ANAPC11Q9NYG5 84 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 COX16Q9P0S2 106 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 NYAP2Q9P242 653 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 TUBGCP4Q9UGJ1 667 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 FOXA2Q9Y261 457 aaPredicted RBP4.58□□□□□ -1.68
SMC5-203ENST00000475540 NUDCQ9Y266 331 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 U3KQV3 271 aa4.58□□□□□ -1.68
SMC5-203ENST00000475540 A0A1B0GWJ7 208 aa4.57□□□□□ -1.68
SMC5-203ENST00000475540 F8WDY8 70 aa4.57□□□□□ -1.68
SMC5-203ENST00000475540 TNFSF11O14788 317 aa4.57□□□□□ -1.68
SMC5-203ENST00000475540 GPAA1O43292 621 aa4.57□□□□□ -1.68
SMC5-203ENST00000475540 IDH1O75874 414 aaKnown RBP4.57□□□□□ -1.68
SMC5-203ENST00000475540 CXCL14O95715 111 aa4.57□□□□□ -1.68
SMC5-203ENST00000475540 AK1P00568 194 aa4.57□□□□□ -1.68
SMC5-203ENST00000475540 CXCL10P02778 98 aa4.57□□□□□ -1.68
SMC5-203ENST00000475540 PDHBP11177 359 aa4.57□□□□□ -1.68
SMC5-203ENST00000475540 HNRNPFP52597 415 aaKnown RBP4.57□□□□□ -1.68
SMC5-203ENST00000475540 GEMP55040 296 aa4.57□□□□□ -1.68
SMC5-203ENST00000475540 CEBPEQ15744 281 aa4.57□□□□□ -1.68
SMC5-203ENST00000475540 HERC4Q5GLZ8 1057 aaPredicted RBP4.57□□□□□ -1.68
SMC5-203ENST00000475540 B3GLCTQ6Y288 498 aa4.57□□□□□ -1.68
SMC5-203ENST00000475540 GCNT7Q6ZNI0 430 aa4.57□□□□□ -1.68
SMC5-203ENST00000475540 LUZP1Q86V48 1076 aa4.57□□□□□ -1.68
SMC5-203ENST00000475540 SLCO4A1Q96BD0 722 aa4.57□□□□□ -1.68
SMC5-203ENST00000475540 COG3Q96JB2 828 aa4.57□□□□□ -1.68
SMC5-203ENST00000475540 RPGRIP1Q96KN7 1286 aa4.57□□□□□ -1.68
SMC5-203ENST00000475540 MAPKAP1Q9BPZ7 522 aa4.57□□□□□ -1.68
SMC5-203ENST00000475540 TCHPQ9BT92 498 aa4.57□□□□□ -1.68
SMC5-203ENST00000475540 CARD9Q9H257 536 aa4.57□□□□□ -1.68
SMC5-203ENST00000475540 ECT2Q9H8V3 914 aa4.57□□□□□ -1.68
SMC5-203ENST00000475540 ADGRL4Q9HBW9 690 aa4.57□□□□□ -1.68
SMC5-203ENST00000475540 KCNMB3Q9NPA1 279 aa4.57□□□□□ -1.68
SMC5-203ENST00000475540 CENPMQ9NSP4 180 aa4.57□□□□□ -1.68
SMC5-203ENST00000475540 ZCCHC3Q9NUD5 404 aaKnown RBP4.57□□□□□ -1.68
SMC5-203ENST00000475540 LAMP5Q9UJQ1 280 aa4.57□□□□□ -1.68
SMC5-203ENST00000475540 DIMT1Q9UNQ2 313 aaKnown RBP4.57□□□□□ -1.68
SMC5-203ENST00000475540 SYNRGQ9UMZ2 1314 aa4.56□□□□□ -1.68
SMC5-203ENST00000475540 CCDC169A6NNP5 214 aa4.56□□□□□ -1.68
SMC5-203ENST00000475540 UBXN8O00124 270 aa4.56□□□□□ -1.68
SMC5-203ENST00000475540 KRT6BP04259 564 aa4.56□□□□□ -1.68
SMC5-203ENST00000475540 UGT1A6P19224 532 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms