RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 CCDC116Q8IYX3 515 aa9.13□□□□□ -0.95
SCAMP3-205ENST00000472397 OR7G1Q8NGA0 311 aa9.13□□□□□ -0.95
SCAMP3-205ENST00000472397 OR4F6Q8NGB9 312 aa9.13□□□□□ -0.95
SCAMP3-205ENST00000472397 OR4K17Q8NGC6 315 aa9.13□□□□□ -0.95
SCAMP3-205ENST00000472397 OR9A2Q8NGT5 310 aa9.13□□□□□ -0.95
SCAMP3-205ENST00000472397 PPP1R14CQ8TAE6 165 aa9.13□□□□□ -0.95
SCAMP3-205ENST00000472397 EXOSC8Q96B26 276 aaKnown RBP9.13□□□□□ -0.95
SCAMP3-205ENST00000472397 TM4SF18Q96CE8 201 aa9.13□□□□□ -0.95
SCAMP3-205ENST00000472397 NTNG2Q96CW9 530 aa9.13□□□□□ -0.95
SCAMP3-205ENST00000472397 REPS1Q96D71 796 aa9.13□□□□□ -0.95
SCAMP3-205ENST00000472397 CNRIP1Q96F85 164 aaPredicted RBP9.13□□□□□ -0.95
SCAMP3-205ENST00000472397 COL21A1Q96P44 957 aa9.13□□□□□ -0.95
SCAMP3-205ENST00000472397 PINK1Q9BXM7 581 aa9.13□□□□□ -0.95
SCAMP3-205ENST00000472397 MED11Q9P086 117 aa9.13□□□□□ -0.95
SCAMP3-205ENST00000472397 CES1P1Q9UKY3 287 aa9.13□□□□□ -0.95
SCAMP3-205ENST00000472397 EXO1Q9UQ84 846 aaKnown RBP9.13□□□□□ -0.95
SCAMP3-205ENST00000472397 SAR1BQ9Y6B6 198 aa9.13□□□□□ -0.95
SCAMP3-205ENST00000472397 IKBKGQ9Y6K9 419 aa9.13□□□□□ -0.95
SCAMP3-205ENST00000472397 EXPH5Q8NEV8 1989 aa9.13□□□□□ -0.95
SCAMP3-205ENST00000472397 NSD1Q96L73 2696 aaPredicted RBP9.13□□□□□ -0.95
SCAMP3-205ENST00000472397 ARID1AO14497 2285 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 RTTNQ86VV8 2226 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 SLC22A20A6NK97 555 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 SYCE1LA8MT33 242 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 CBR3O75828 277 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 CNOT4O95628 575 aaKnown RBP9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 PDYNP01213 254 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 ZNF708P17019 499 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 HK1P19367 917 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 GRK2P25098 689 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 DPP4P27487 766 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 GALNSP34059 522 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 CD79BP40259 229 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 KIR2DL2P43627 348 aaPredicted RBP9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 PTH2RP49190 550 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 EMDP50402 254 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 ALDH18A1P54886 795 aaKnown RBP9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 CLDN15P56746 228 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 CLDN20P56880 219 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 B3GALT5-AS1P59052 145 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 BTKQ06187 659 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 IFT88Q13099 833 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 PRSS53Q2L4Q9 553 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 LGSNQ5TDP6 509 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 RAET1LQ5VY80 246 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 SLC48A1Q6P1K1 146 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 LARP4Q71RC2 724 aaKnown RBP eCLIP9.12□□□□□ -0.955e-11■■□□□ 14.1
SCAMP3-205ENST00000472397 ADGRE4PQ86SQ3 457 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 C1orf52Q8N6N3 182 aaKnown RBP9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 CDC26Q8NHZ8 85 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 CTHRC1Q96CG8 243 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 GPR78Q96P69 363 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 SECISBP2Q96T21 854 aaKnown RBP9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 NAPGQ99747 312 aaPredicted RBP9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 ERP44Q9BS26 406 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 BDH2Q9BUT1 245 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 EBPLQ9BY08 206 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 RTN4RQ9BZR6 473 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 PIGMQ9H3S5 423 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 ZBTB26Q9HCK0 441 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 CSPG4Q6UVK1 2322 aa9.12□□□□□ -0.95
SCAMP3-205ENST00000472397 A0A087X1B8 175 aa9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 ESYT3A0FGR9 886 aa9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 GOLGA6L10A6NI86 522 aa9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 CCDC188H7C350 402 aa9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 FOXE1O00358 373 aaPredicted RBP9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 KLHL2O95198 593 aa9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 THBDP07204 575 aa9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 CSNK2A2P19784 350 aaPredicted RBP9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 CRYGSP22914 178 aa9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 LOXP28300 417 aaPredicted RBP9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 IL12BP29460 328 aa9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 TYK2P29597 1187 aa9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 SRD5A2P31213 254 aa9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 UGT2B10P36537 528 aa9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 SLC7A5Q01650 507 aa9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 GALNT1Q10472 559 aaPredicted RBP9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 MAP4K2Q12851 820 aa9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 TRAF3Q13114 568 aa9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 TSC22D1Q15714 1073 aa9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 FAM83EQ2M2I3 478 aa9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 TECRLQ5HYJ1 363 aa9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 TEX35Q5T0J7 233 aa9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 FRG2Q64ET8 278 aa9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 AAGABQ6PD74 315 aa9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 CXXC5Q7LFL8 322 aaKnown RBP9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 MILR1Q7Z6M3 343 aa9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 GALNT10Q86SR1 603 aa9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 WFDC8Q8IUA0 241 aa9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 SLC44A2Q8IWA5 706 aaPredicted RBP9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 METTL4Q8N3J2 472 aa9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 L3MBTL4Q8NA19 623 aa9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 C7orf57Q8NEG2 295 aa9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 UHMK1Q8TAS1 419 aaKnown RBP9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 FNDC9Q8TBE3 224 aa9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 FBXO25Q8TCJ0 367 aa9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 ANP32BQ92688 251 aaKnown RBP9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 PIGTQ969N2 578 aa9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 TMCO6Q96DC7 493 aa9.11□□□□□ -0.95
SCAMP3-205ENST00000472397 FRG2BQ96QU4 278 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms