RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, human

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-209	ENST00000472044	RNLS	Q5VYX0	342 aa		2.95	□□□□□ -1.94
PTCD3-209	ENST00000472044	DMKN	Q6E0U4	476 aa	Predicted RBP	2.95	□□□□□ -1.94
PTCD3-209	ENST00000472044	ZCCHC12	Q6PEW1	402 aa		2.95	□□□□□ -1.94
PTCD3-209	ENST00000472044	UNC5D	Q6UXZ4	953 aa		2.95	□□□□□ -1.94
PTCD3-209	ENST00000472044	P4HA3	Q7Z4N8	544 aa		2.95	□□□□□ -1.94
PTCD3-209	ENST00000472044	ADCK1	Q86TW2	530 aa		2.95	□□□□□ -1.94
PTCD3-209	ENST00000472044	HSCB	Q8IWL3	235 aa		2.95	□□□□□ -1.94
PTCD3-209	ENST00000472044	CCDC36	Q8IYA8	594 aa		2.95	□□□□□ -1.94
PTCD3-209	ENST00000472044	SLC22A18AS	Q8N1D0	253 aa		2.95	□□□□□ -1.94
PTCD3-209	ENST00000472044	SLC39A11	Q8N1S5	342 aa		2.95	□□□□□ -1.94
PTCD3-209	ENST00000472044	CENPS	Q8N2Z9	138 aa		2.95	□□□□□ -1.94
PTCD3-209	ENST00000472044	NFAM1	Q8NET5	270 aa	Predicted RBP	2.95	□□□□□ -1.94
PTCD3-209	ENST00000472044	ANKRD20A12P	Q8NF67	263 aa		2.95	□□□□□ -1.94
PTCD3-209	ENST00000472044	OR4F17	Q8NGA8	305 aa		2.95	□□□□□ -1.94
PTCD3-209	ENST00000472044	OR52B4	Q8NGK2	314 aa		2.95	□□□□□ -1.94
PTCD3-209	ENST00000472044	OR52J3	Q8NH60	311 aa		2.95	□□□□□ -1.94
PTCD3-209	ENST00000472044	PINX1	Q96BK5	328 aa	Known RBP	2.95	□□□□□ -1.94
PTCD3-209	ENST00000472044	RAB3C	Q96E17	227 aa		2.95	□□□□□ -1.94
PTCD3-209	ENST00000472044	ZBED6CL	Q96FA7	236 aa	Predicted RBP	2.95	□□□□□ -1.94
PTCD3-209	ENST00000472044	PIWIL1	Q96J94	861 aa	Known RBP	2.95	□□□□□ -1.94
PTCD3-209	ENST00000472044	OR4F4	Q96R69	305 aa		2.95	□□□□□ -1.94
PTCD3-209	ENST00000472044	RPAP3	Q9H6T3	665 aa	Predicted RBP	2.95	□□□□□ -1.94
PTCD3-209	ENST00000472044	ROPN1	Q9HAT0	212 aa	Predicted RBP	2.95	□□□□□ -1.94
PTCD3-209	ENST00000472044	IMPAD1	Q9NX62	359 aa		2.95	□□□□□ -1.94
PTCD3-209	ENST00000472044	TAS2R3	Q9NYW6	316 aa		2.95	□□□□□ -1.94
PTCD3-209	ENST00000472044	KLRF1	Q9NZS2	232 aa		2.95	□□□□□ -1.94
PTCD3-209	ENST00000472044	DHRS4-AS1	Q9P1J3	65 aa		2.95	□□□□□ -1.94
PTCD3-209	ENST00000472044	GHRL	Q9UBU3	117 aa		2.95	□□□□□ -1.94
PTCD3-209	ENST00000472044	MMP24	Q9Y5R2	645 aa		2.95	□□□□□ -1.94
PTCD3-209	ENST00000472044	GRIN2D	O15399	1336 aa		2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	TRBV7-9	A0A0J9YWB2	115 aa		2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	FAM230A	A0A1W2PPH8	454 aa		2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	TTC26	A0AVF1	554 aa		2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	C19orf81	C9J6K1	198 aa		2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	RAMP1	O60894	148 aa		2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	ZNF253	O75346	499 aa		2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	TOM1L1	O75674	476 aa		2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	PRAMEF12	O95522	483 aa		2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	GHR	P10912	638 aa		2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	RFC2	P35250	354 aa		2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	TAF6	P49848	677 aa		2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	GPC3	P51654	580 aa		2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	METAP1	P53582	386 aa		2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	HMGCS2	P54868	508 aa		2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	SRY	Q05066	204 aa		2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	PDZK1IP1	Q13113	114 aa		2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	ZIC1	Q15915	447 aa		2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	CYBRD1	Q53TN4	286 aa		2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	BAIAP2L2	Q6UXY1	529 aa		2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	TSEN54	Q7Z6J9	526 aa	Known RBP	2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	SERINC5	Q86VE9	423 aa		2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	FCGR1B	Q92637	280 aa		2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	MCHR2	Q969V1	340 aa		2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	C11orf24	Q96F05	449 aa	Predicted RBP	2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	APOL2	Q9BQE5	337 aa		2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	PNN	Q9H307	717 aa	Known RBP	2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	TRPV5	Q9NQA5	729 aa		2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	DCAF13	Q9NV06	445 aa	Known RBP	2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	FAM120C	Q9NX05	1096 aa	Known RBP	2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	ARMCX1	Q9P291	453 aa		2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	ATXN10	Q9UBB4	475 aa		2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	FOXJ3	Q9UPW0	622 aa		2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	MGAT4B	Q9UQ53	548 aa		2.94	□□□□□ -1.94
PTCD3-209	ENST00000472044	ABCC4	O15439	1325 aa		2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044	TRAV9-2	A0A087WT02	112 aa		2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044	TRABD2B	A6NFA1	517 aa		2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044	C11orf98	E9PRG8	122 aa		2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044		F8WDY8	70 aa		2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044		H3BMH7	237 aa		2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044	TM9SF1	O15321	606 aa		2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044	LRRTM2	O43300	516 aa		2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044	SDC3	O75056	442 aa		2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044	SRSF10	O75494	262 aa	Known RBP	2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044	APBB3	O95704	486 aa		2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044	RRAS	P10301	218 aa		2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044	DPP4	P27487	766 aa		2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044	POU3F4	P49335	361 aa		2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044	KRTAP10-12	P60413	245 aa		2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044	HSF2	Q03933	536 aa		2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044	CRMP1	Q14194	572 aa		2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044	EIF2B1	Q14232	305 aa	Known RBP	2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044	CDKN3	Q16667	212 aa		2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044	PPP1R3A	Q16821	1122 aa		2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044		Q1RN00	199 aa		2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044	TTC31	Q49AM3	519 aa	Predicted RBP	2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044	SLC25A30	Q5SVS4	291 aa		2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044	BEND6	Q5SZJ8	279 aa	Predicted RBP	2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044		Q6ZR54	194 aa		2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044	GIPC3	Q8TF64	312 aa		2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044	ADIPOR1	Q96A54	375 aa		2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044	DNAJA3	Q96EY1	480 aa		2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044	MCCC1	Q96RQ3	725 aa	Predicted RBP	2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044	FICD	Q9BVA6	458 aa		2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044	CARD6	Q9BX69	1037 aa		2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044	VAT1L	Q9HCJ6	419 aa		2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044	RPS10P5	Q9NQ39	176 aa		2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044	CUTC	Q9NTM9	273 aa		2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044	DUS2	Q9NX74	493 aa	Known RBP	2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044	GDAP2	Q9NXN4	497 aa		2.93	□□□□□ -1.94
PTCD3-209	ENST00000472044	NTNG1	Q9Y2I2	539 aa		2.93	□□□□□ -1.94

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