RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 KLHL28Q9NXS3 571 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 UTS2RQ9UKP6 389 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 CFL2Q9Y281 166 aa11.11□□□□□ -0.63
HDAC3-204ENST00000469207 A0A1W2PNV4 684 aa11.1□□□□□ -0.63
HDAC3-204ENST00000469207 CCDC189A1A4V9 331 aa11.1□□□□□ -0.63
HDAC3-204ENST00000469207 STX16-NPEPL1H3BU86 382 aa11.1□□□□□ -0.63
HDAC3-204ENST00000469207 STX16O14662 325 aa11.1□□□□□ -0.63
HDAC3-204ENST00000469207 TO15178 435 aa11.1□□□□□ -0.63
HDAC3-204ENST00000469207 ACOX3O15254 700 aa11.1□□□□□ -0.63
HDAC3-204ENST00000469207 TSPAN2O60636 221 aa11.1□□□□□ -0.63
HDAC3-204ENST00000469207 SMIM24O75264 130 aa11.1□□□□□ -0.63
HDAC3-204ENST00000469207 SMNDC1O75940 238 aaKnown RBP eCLIP11.1□□□□□ -0.63
HDAC3-204ENST00000469207 RBP1P09455 135 aa11.1□□□□□ -0.63
HDAC3-204ENST00000469207 RHOXF2BP0C7M4 288 aa11.1□□□□□ -0.63
HDAC3-204ENST00000469207 ZNF708P17019 499 aa11.1□□□□□ -0.63
HDAC3-204ENST00000469207 MAGEA12P43365 314 aa11.1□□□□□ -0.63
HDAC3-204ENST00000469207 SUCLG1P53597 346 aaKnown RBP11.1□□□□□ -0.63
HDAC3-204ENST00000469207 GAS1P54826 345 aa11.1□□□□□ -0.63
HDAC3-204ENST00000469207 RAE1P78406 368 aaKnown RBP11.1□□□□□ -0.63
HDAC3-204ENST00000469207 SNTA1Q13424 505 aa11.1□□□□□ -0.63
HDAC3-204ENST00000469207 ZNF628Q5EBL2 1059 aa11.1□□□□□ -0.63
HDAC3-204ENST00000469207 METTL2BQ6P1Q9 378 aaKnown RBP11.1□□□□□ -0.63
HDAC3-204ENST00000469207 ZNF474Q6S9Z5 364 aaPredicted RBP11.1□□□□□ -0.63
HDAC3-204ENST00000469207 ENPP6Q6UWR7 440 aa11.1□□□□□ -0.63
HDAC3-204ENST00000469207 BTLAQ7Z6A9 289 aa11.1□□□□□ -0.63
HDAC3-204ENST00000469207 CCDC91Q7Z6B0 441 aa11.1□□□□□ -0.63
HDAC3-204ENST00000469207 GRAMD2AQ8IUY3 354 aa11.1□□□□□ -0.63
HDAC3-204ENST00000469207 UBQLNLQ8IYU4 475 aa11.1□□□□□ -0.63
HDAC3-204ENST00000469207 OR9A2Q8NGT5 310 aa11.1□□□□□ -0.63
HDAC3-204ENST00000469207 UHMK1Q8TAS1 419 aaKnown RBP11.1□□□□□ -0.63
HDAC3-204ENST00000469207 ZNF483Q8TF39 744 aaPredicted RBP11.1□□□□□ -0.63
HDAC3-204ENST00000469207 FIG4Q92562 907 aa11.1□□□□□ -0.63
HDAC3-204ENST00000469207 ISL2Q96A47 359 aa11.1□□□□□ -0.63
HDAC3-204ENST00000469207 EXOSC8Q96B26 276 aaKnown RBP11.1□□□□□ -0.63
HDAC3-204ENST00000469207 EFHD2Q96C19 240 aaPredicted RBP11.1□□□□□ -0.63
HDAC3-204ENST00000469207 TMCO6Q96DC7 493 aa11.1□□□□□ -0.63
HDAC3-204ENST00000469207 ARSGQ96EG1 525 aa11.1□□□□□ -0.63
HDAC3-204ENST00000469207 SFXN2Q96NB2 322 aa11.1□□□□□ -0.63
HDAC3-204ENST00000469207 COL21A1Q96P44 957 aa11.1□□□□□ -0.63
HDAC3-204ENST00000469207 RTN4RQ9BZR6 473 aa11.1□□□□□ -0.63
HDAC3-204ENST00000469207 OPN3Q9H1Y3 402 aaPredicted RBP11.1□□□□□ -0.63
HDAC3-204ENST00000469207 PFDN4Q9NQP4 134 aa11.1□□□□□ -0.63
HDAC3-204ENST00000469207 BEX4Q9NWD9 120 aaPredicted RBP11.1□□□□□ -0.63
HDAC3-204ENST00000469207 FLRT3Q9NZU0 649 aa11.1□□□□□ -0.63
HDAC3-204ENST00000469207 ZNF780BQ9Y6R6 833 aa11.1□□□□□ -0.63
HDAC3-204ENST00000469207 PCNX3Q9H6A9 2034 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 FRG2CA6NGY1 282 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 OR6C70A6NIJ9 312 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 DEFB108AA8MXU0 73 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 SMAD7O15105 426 aaKnown RBP11.09□□□□□ -0.63
HDAC3-204ENST00000469207 CDH16O75309 829 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 ESRRBO95718 433 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 IL3P08700 152 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 RPS17P08708 135 aaKnown RBP11.09□□□□□ -0.63
HDAC3-204ENST00000469207 DPP4P27487 766 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 SRD5A2P31213 254 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 CASQ1P31415 396 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 GCKP35557 465 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 HSD17B3P37058 310 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 B3GALT5-AS1P59052 145 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 GGTA1PQ4G0N0 100 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 Q5PR19 223 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 TEX35Q5T0J7 233 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 ANKRD34AQ69YU3 496 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 SCIMPQ6UWF3 145 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 SYT10Q6XYQ8 523 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 LARP4Q71RC2 724 aaKnown RBP eCLIP11.09□□□□□ -0.635e-6■■□□□ 12.4
HDAC3-204ENST00000469207 ZNF550Q7Z398 422 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 CDYL2Q8N8U2 506 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 CNEP1R1Q8N9A8 125 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 PIK3IP1Q96FE7 263 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 PGM2Q96G03 612 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 SLC35A4Q96G79 324 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 ZC3HAV1LQ96H79 300 aaKnown RBP11.09□□□□□ -0.63
HDAC3-204ENST00000469207 FAM111AQ96PZ2 611 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 DSN1Q9H410 356 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 ACSS3Q9H6R3 686 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 MED11Q9P086 117 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 PRODH2Q9UF12 536 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 NDRG3Q9UGV2 375 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 DKKL1Q9UK85 242 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 PACSIN3Q9UKS6 424 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 PSME2Q9UL46 239 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 DLGAP4Q9Y2H0 992 aa11.09□□□□□ -0.63
HDAC3-204ENST00000469207 FN1P02751 2386 aaKnown RBP11.08□□□□□ -0.64
HDAC3-204ENST00000469207 A8MT66 165 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 POC1B-GALNT4F8VUJ3 575 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 H7C1Q1 480 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 MANBAO00462 879 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 CTIFO43310 598 aaKnown RBP11.08□□□□□ -0.64
HDAC3-204ENST00000469207 SCO2O43819 266 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 GUCY1B2O75343 617 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 GRK2P25098 689 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 KIR2DL2P43627 348 aaPredicted RBP11.08□□□□□ -0.64
HDAC3-204ENST00000469207 HTR6P50406 440 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 DIO3P55073 304 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 SIRPAP78324 504 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 BTKQ06187 659 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 GAB1Q13480 694 aa11.08□□□□□ -0.64
HDAC3-204ENST00000469207 UNC50Q53HI1 259 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms