RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 OR6C2Q9NZP2 312 aa9.41□□□□□ -0.9
NUP50-214ENST00000469163 MARK1Q9P0L2 795 aa9.41□□□□□ -0.9
NUP50-214ENST00000469163 DCDC2Q9UHG0 476 aa9.41□□□□□ -0.9
NUP50-214ENST00000469163 ERVW-1Q9UQF0 538 aa9.41□□□□□ -0.9
NUP50-214ENST00000469163 ORC6Q9Y5N6 252 aa9.41□□□□□ -0.9
NUP50-214ENST00000469163 PTGDR2Q9Y5Y4 395 aa9.41□□□□□ -0.9
NUP50-214ENST00000469163 PPP6CO00743 305 aa9.41□□□□□ -0.9
NUP50-214ENST00000469163 PSMD3O43242 534 aa9.41□□□□□ -0.9
NUP50-214ENST00000469163 ZFC3H1O60293 1989 aaKnown RBP9.41□□□□□ -0.9
NUP50-214ENST00000469163 OR10H2O60403 315 aa9.41□□□□□ -0.9
NUP50-214ENST00000469163 SELENOFO60613 162 aa9.41□□□□□ -0.9
NUP50-214ENST00000469163 VPS26AO75436 327 aa9.41□□□□□ -0.9
NUP50-214ENST00000469163 KLF8O95600 359 aaPredicted RBP9.41□□□□□ -0.9
NUP50-214ENST00000469163 APODP05090 189 aa9.41□□□□□ -0.9
NUP50-214ENST00000469163 SNRPB2P08579 225 aaKnown RBP9.41□□□□□ -0.9
NUP50-214ENST00000469163 GJA4P35212 333 aa9.41□□□□□ -0.9
NUP50-214ENST00000469163 MAGEA2P43356 314 aa9.41□□□□□ -0.9
NUP50-214ENST00000469163 CLDN2P57739 230 aa9.41□□□□□ -0.9
NUP50-214ENST00000469163 FADDQ13158 208 aa9.41□□□□□ -0.9
NUP50-214ENST00000469163 UGT8Q16880 541 aa9.41□□□□□ -0.9
NUP50-214ENST00000469163 LGALSLQ3ZCW2 172 aaPredicted RBP9.41□□□□□ -0.9
NUP50-214ENST00000469163 C1orf53Q5VUE5 145 aa9.41□□□□□ -0.9
NUP50-214ENST00000469163 ANKRD34AQ69YU3 496 aa9.41□□□□□ -0.9
NUP50-214ENST00000469163 MZT2BQ6NZ67 158 aa9.41□□□□□ -0.9
NUP50-214ENST00000469163 CFAP206Q8IYR0 622 aa9.41□□□□□ -0.9
NUP50-214ENST00000469163 PTGR2Q8N8N7 351 aaPredicted RBP9.41□□□□□ -0.9
NUP50-214ENST00000469163 HUS1BQ8NHY5 278 aa9.41□□□□□ -0.9
NUP50-214ENST00000469163 CREB3L4Q8TEY5 395 aa9.41□□□□□ -0.9
NUP50-214ENST00000469163 GCDHQ92947 438 aaPredicted RBP9.41□□□□□ -0.9
NUP50-214ENST00000469163 OTULINQ96BN8 352 aa9.41□□□□□ -0.9
NUP50-214ENST00000469163 NXPE2Q96DL1 559 aa9.41□□□□□ -0.9
NUP50-214ENST00000469163 CPNE1Q99829 537 aa9.41□□□□□ -0.9
NUP50-214ENST00000469163 AMBRA1Q9C0C7 1298 aa9.41□□□□□ -0.9
NUP50-214ENST00000469163 METTL9Q9H1A3 318 aa9.41□□□□□ -0.9
NUP50-214ENST00000469163 GAREM1Q9H706 876 aa9.41□□□□□ -0.9
NUP50-214ENST00000469163 SEMA3GQ9NS98 782 aa9.41□□□□□ -0.9
NUP50-214ENST00000469163 POLR3HQ9Y535 204 aaPredicted RBP9.41□□□□□ -0.9
NUP50-214ENST00000469163 LOC102723532A0A0G2JNH3 316 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 ZCWPW2A0A1B0GU75 182 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 AIPO00170 330 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 PEX11BO96011 259 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 MUC1P15941 1255 aaPredicted RBP9.4□□□□□ -0.9
NUP50-214ENST00000469163 GALNSP34059 522 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 TGFBR2P37173 567 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 GRIA4P48058 902 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 CDKN2DP55273 166 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 FABP9Q0Z7S8 132 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 PDGFRLQ15198 375 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 CPSF6Q16630 551 aaKnown RBP eCLIP9.4□□□□□ -0.9
NUP50-214ENST00000469163 SMN1Q16637 294 aaKnown RBP9.4□□□□□ -0.9
NUP50-214ENST00000469163 PYCR3Q53H96 274 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 LCN1P1Q5VSP4 162 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 ANKRD46Q86W74 232 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 ZNF761Q86XN6 746 aaPredicted RBP9.4□□□□□ -0.9
NUP50-214ENST00000469163 HIPK1Q86Z02 1210 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 ZNF614Q8N883 585 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 ZNF383Q8NA42 475 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 DCAF4L2Q8NA75 395 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 EEF1AKMT1Q8WVE0 214 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 COL26A1Q96A83 441 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 DIRAS2Q96HU8 199 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 SLC30A3Q99726 388 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 DUSP26Q9BV47 211 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 OR51B6Q9H340 312 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 TAS2R13Q9NYV9 303 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 FBXO10Q9UK96 956 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 SLC22A14Q9Y267 594 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 NBASA2RRP1 2371 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 FABP12A6NFH5 140 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 MPTX1A8MV57 137 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 NME4O00746 187 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 BCKDKO14874 412 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 TRIM13O60858 407 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 ANXA3P12429 323 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 HOXB2P14652 356 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 HLA-DPA1P20036 260 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 HOXC12P31275 282 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 AGTR2P50052 363 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 DGKEP52429 567 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 TAF1AQ15573 450 aaPredicted RBP9.4□□□□□ -0.9
NUP50-214ENST00000469163 INO80DQ53TQ3 878 aaPredicted RBP9.4□□□□□ -0.9
NUP50-214ENST00000469163 C3P1Q6ZMU1 363 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 SHFQ7M4L6 423 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 DCUN1D3Q8IWE4 304 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 PHACTR4Q8IZ21 702 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 FTMTQ8N4E7 242 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 ZNF655Q8N720 491 aaPredicted RBP9.4□□□□□ -0.9
NUP50-214ENST00000469163 CDYL2Q8N8U2 506 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 TMIEQ8NEW7 156 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 ASB16Q96NS5 453 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 ERMAPQ96PL5 475 aaPredicted RBP9.4□□□□□ -0.9
NUP50-214ENST00000469163 MID1IP1Q9NPA3 183 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 KLHL1Q9NR64 748 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 IMP3Q9NV31 184 aaKnown RBP9.4□□□□□ -0.9
NUP50-214ENST00000469163 ARL15Q9NXU5 204 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 MRTO4Q9UKD2 239 aaKnown RBP9.4□□□□□ -0.9
NUP50-214ENST00000469163 TRAPPC4Q9Y296 219 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 NCKAP1Q9Y2A7 1128 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 SLC9A8Q9Y2E8 581 aa9.4□□□□□ -0.9
NUP50-214ENST00000469163 POFUT2Q9Y2G5 429 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms