RNA–Protein interactions for RNA: ENST00000466957.1

SLF1-203, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 5

Gene SLF1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-203ENST00000466957 DDX60LQ5H9U9 1706 aaKnown RBP3.46□□□□□ -1.86
SLF1-203ENST00000466957 CACNA1BQ00975 2339 aa3.45□□□□□ -1.86
SLF1-203ENST00000466957 BAHCC1Q9P281 2608 aa3.45□□□□□ -1.86
SLF1-203ENST00000466957 ZFHX2Q9C0A1 2572 aaPredicted RBP3.45□□□□□ -1.86
SLF1-203ENST00000466957 A0A0B4J203 849 aa3.45□□□□□ -1.86
SLF1-203ENST00000466957 A0A0U1RQG5 324 aaPredicted RBP3.45□□□□□ -1.86
SLF1-203ENST00000466957 OOEPA6NGQ2 149 aa3.45□□□□□ -1.86
SLF1-203ENST00000466957 H0Y626 953 aa3.45□□□□□ -1.86
SLF1-203ENST00000466957 PSMA7O14818 248 aa3.45□□□□□ -1.86
SLF1-203ENST00000466957 GRAP2O75791 330 aa3.45□□□□□ -1.86
SLF1-203ENST00000466957 RLN1P04808 185 aa3.45□□□□□ -1.86
SLF1-203ENST00000466957 FHP07954 510 aa3.45□□□□□ -1.86
SLF1-203ENST00000466957 ANKRD34CP0C6C1 535 aa3.45□□□□□ -1.86
SLF1-203ENST00000466957 P0C879 139 aa3.45□□□□□ -1.86
SLF1-203ENST00000466957 KRT3P12035 628 aa3.45□□□□□ -1.86
SLF1-203ENST00000466957 PPP2R1BP30154 601 aa3.45□□□□□ -1.86
SLF1-203ENST00000466957 ANP32AP39687 249 aaKnown RBP3.45□□□□□ -1.86
SLF1-203ENST00000466957 GPR50Q13585 617 aa3.45□□□□□ -1.86
SLF1-203ENST00000466957 TMEM31Q5JXX7 168 aa3.45□□□□□ -1.86
SLF1-203ENST00000466957 CELF3Q5SZQ8 465 aaKnown RBP3.45□□□□□ -1.86
SLF1-203ENST00000466957 SHQ1Q6PI26 577 aaKnown RBP3.45□□□□□ -1.86
SLF1-203ENST00000466957 C11orf88Q6PI97 169 aa3.45□□□□□ -1.86
SLF1-203ENST00000466957 COPS6Q7L5N1 327 aa3.45□□□□□ -1.86
SLF1-203ENST00000466957 CREBRFQ8IUR6 639 aa3.45□□□□□ -1.86
SLF1-203ENST00000466957 ZNF491Q8N8L2 437 aa3.45□□□□□ -1.86
SLF1-203ENST00000466957 ATAD1Q8NBU5 361 aa3.45□□□□□ -1.86
SLF1-203ENST00000466957 GOT1L1Q8NHS2 421 aaPredicted RBP3.45□□□□□ -1.86
SLF1-203ENST00000466957 ZNF564Q8TBZ8 553 aaPredicted RBP3.45□□□□□ -1.86
SLF1-203ENST00000466957 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.45□□□□□ -1.86
SLF1-203ENST00000466957 EXOC4Q96A65 974 aa3.45□□□□□ -1.86
SLF1-203ENST00000466957 NTNG2Q96CW9 530 aa3.45□□□□□ -1.86
SLF1-203ENST00000466957 PRMT1Q99873 361 aaKnown RBP3.45□□□□□ -1.86
SLF1-203ENST00000466957 CCM2Q9BSQ5 444 aa3.45□□□□□ -1.86
SLF1-203ENST00000466957 VIPAS39Q9H9C1 493 aa3.45□□□□□ -1.86
SLF1-203ENST00000466957 TRANK1O15050 2925 aa3.45□□□□□ -1.86
SLF1-203ENST00000466957 CHD8Q9HCK8 2581 aa3.44□□□□□ -1.86
SLF1-203ENST00000466957 COL1A1P02452 1464 aaPredicted RBP3.44□□□□□ -1.86
SLF1-203ENST00000466957 FRG2CA6NGY1 282 aa3.44□□□□□ -1.86
SLF1-203ENST00000466957 CCT8L1PA6NM43 557 aa3.44□□□□□ -1.86
SLF1-203ENST00000466957 STX6O43752 255 aa3.44□□□□□ -1.86
SLF1-203ENST00000466957 FCGR3AP08637 254 aa3.44□□□□□ -1.86
SLF1-203ENST00000466957 P4HA1P13674 534 aa3.44□□□□□ -1.86
SLF1-203ENST00000466957 EIF2S2P20042 333 aaKnown RBP3.44□□□□□ -1.86
SLF1-203ENST00000466957 FHITP49789 147 aa3.44□□□□□ -1.86
SLF1-203ENST00000466957 PAX2Q02962 417 aa3.44□□□□□ -1.86
SLF1-203ENST00000466957 MEP1BQ16820 701 aa3.44□□□□□ -1.86
SLF1-203ENST00000466957 PPP1R3AQ16821 1122 aa3.44□□□□□ -1.86
SLF1-203ENST00000466957 CCDC184Q52MB2 194 aa3.44□□□□□ -1.86
SLF1-203ENST00000466957 LYPLAL1Q5VWZ2 237 aa3.44□□□□□ -1.86
SLF1-203ENST00000466957 ZNF776Q68DI1 518 aaPredicted RBP3.44□□□□□ -1.86
SLF1-203ENST00000466957 CACUL1Q86Y37 369 aa3.44□□□□□ -1.86
SLF1-203ENST00000466957 ERO1BQ86YB8 467 aa3.44□□□□□ -1.86
SLF1-203ENST00000466957 NHLRC2Q8NBF2 726 aa3.44□□□□□ -1.86
SLF1-203ENST00000466957 RNF149Q8NC42 400 aa3.44□□□□□ -1.86
SLF1-203ENST00000466957 ZNF671Q8TAW3 534 aa3.44□□□□□ -1.86
SLF1-203ENST00000466957 AFAP1L1Q8TED9 768 aa3.44□□□□□ -1.86
SLF1-203ENST00000466957 SEPT8Q92599 483 aa3.44□□□□□ -1.86
SLF1-203ENST00000466957 BSCL2Q96G97 398 aaPredicted RBP3.44□□□□□ -1.86
SLF1-203ENST00000466957 CCT8L2Q96SF2 557 aa3.44□□□□□ -1.86
SLF1-203ENST00000466957 PARK7Q99497 189 aaKnown RBP3.44□□□□□ -1.86
SLF1-203ENST00000466957 ATG101Q9BSB4 218 aa3.44□□□□□ -1.86
SLF1-203ENST00000466957 TDRD3Q9H7E2 651 aaKnown RBP3.44□□□□□ -1.86
SLF1-203ENST00000466957 ELL3Q9HB65 397 aaPredicted RBP3.44□□□□□ -1.86
SLF1-203ENST00000466957 TUFT1Q9NNX1 390 aa3.44□□□□□ -1.86
SLF1-203ENST00000466957 ZNF446Q9NWS9 450 aa3.44□□□□□ -1.86
SLF1-203ENST00000466957 SLCO1C1Q9NYB5 712 aa3.44□□□□□ -1.86
SLF1-203ENST00000466957 LEF1Q9UJU2 399 aaPredicted RBP3.44□□□□□ -1.86
SLF1-203ENST00000466957 DCHS1Q96JQ0 3298 aa3.44□□□□□ -1.86
SLF1-203ENST00000466957 EPG5Q9HCE0 2579 aa3.44□□□□□ -1.86
SLF1-203ENST00000466957 PTPRZ1P23471 2315 aaPredicted RBP3.43□□□□□ -1.86
SLF1-203ENST00000466957 ILVBLA1L0T0 632 aa3.43□□□□□ -1.86
SLF1-203ENST00000466957 ZNF17P17021 662 aa3.43□□□□□ -1.86
SLF1-203ENST00000466957 IER3P46695 156 aa3.43□□□□□ -1.86
SLF1-203ENST00000466957 FOLH1Q04609 750 aa3.43□□□□□ -1.86
SLF1-203ENST00000466957 PPIL2Q13356 520 aa3.43□□□□□ -1.86
SLF1-203ENST00000466957 TYSND1Q2T9J0 566 aa3.43□□□□□ -1.86
SLF1-203ENST00000466957 NHSL2Q5HYW2 709 aa3.43□□□□□ -1.86
SLF1-203ENST00000466957 CASC4Q6P4E1 433 aa3.43□□□□□ -1.86
SLF1-203ENST00000466957 ALKBH5Q6P6C2 394 aaKnown RBP3.43□□□□□ -1.86
SLF1-203ENST00000466957 ZCCHC12Q6PEW1 402 aa3.43□□□□□ -1.86
SLF1-203ENST00000466957 KLHL7Q8IXQ5 586 aa3.43□□□□□ -1.86
SLF1-203ENST00000466957 SGF29Q96ES7 293 aa3.43□□□□□ -1.86
SLF1-203ENST00000466957 COA1Q9GZY4 146 aa3.43□□□□□ -1.86
SLF1-203ENST00000466957 GRPEL1Q9HAV7 217 aa3.43□□□□□ -1.86
SLF1-203ENST00000466957 VPS18Q9P253 973 aa3.43□□□□□ -1.86
SLF1-203ENST00000466957 ZNF319Q9P2F9 582 aa3.43□□□□□ -1.86
SLF1-203ENST00000466957 KMT2BQ9UMN6 2715 aaPredicted RBP3.43□□□□□ -1.86
SLF1-203ENST00000466957 PKD1L2Q7Z442 2459 aa3.43□□□□□ -1.86
SLF1-203ENST00000466957 MYO3BQ8WXR4 1341 aa3.43□□□□□ -1.86
SLF1-203ENST00000466957 LTBP2Q14767 1821 aa3.42□□□□□ -1.86
SLF1-203ENST00000466957 ECM29Q5VYK3 1845 aa3.42□□□□□ -1.86
SLF1-203ENST00000466957 CFAP47Q6ZTR5 3102 aa3.42□□□□□ -1.86
SLF1-203ENST00000466957 MED23Q9ULK4 1368 aa3.42□□□□□ -1.86
SLF1-203ENST00000466957 CHD6Q8TD26 2715 aa3.42□□□□□ -1.86
SLF1-203ENST00000466957 EPOPA6NHQ4 379 aa3.42□□□□□ -1.86
SLF1-203ENST00000466957 ST8SIA3O43173 380 aa3.42□□□□□ -1.86
SLF1-203ENST00000466957 GPAA1O43292 621 aa3.42□□□□□ -1.86
SLF1-203ENST00000466957 STAM2O75886 525 aa3.42□□□□□ -1.86
SLF1-203ENST00000466957 SLU7O95391 586 aaKnown RBP3.42□□□□□ -1.86
SLF1-203ENST00000466957 ACTL6AO96019 429 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms