RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 TCEA1P23193 301 aaKnown RBP14.61□□□□□ -0.07
COL7A1-204ENST00000462475 CPA2P48052 419 aa14.61□□□□□ -0.07
COL7A1-204ENST00000462475 LHX2P50458 406 aa14.61□□□□□ -0.07
COL7A1-204ENST00000462475 CORO7P57737 925 aa14.61□□□□□ -0.07
COL7A1-204ENST00000462475 TRA2BP62995 288 aaKnown RBP14.61□□□□□ -0.07
COL7A1-204ENST00000462475 NPSR1Q6W5P4 371 aa14.61□□□□□ -0.07
COL7A1-204ENST00000462475 PLCZ1Q86YW0 608 aa14.61□□□□□ -0.07
COL7A1-204ENST00000462475 CCDC116Q8IYX3 515 aa14.61□□□□□ -0.07
COL7A1-204ENST00000462475 CDYL2Q8N8U2 506 aa14.61□□□□□ -0.07
COL7A1-204ENST00000462475 OR9A2Q8NGT5 310 aa14.61□□□□□ -0.07
COL7A1-204ENST00000462475 UHMK1Q8TAS1 419 aaKnown RBP14.61□□□□□ -0.07
COL7A1-204ENST00000462475 ZNF675Q8TD23 568 aa14.61□□□□□ -0.07
COL7A1-204ENST00000462475 KAT2AQ92830 837 aa14.61□□□□□ -0.07
COL7A1-204ENST00000462475 WNT2BQ93097 391 aa14.61□□□□□ -0.07
COL7A1-204ENST00000462475 SLC35A4Q96G79 324 aa14.61□□□□□ -0.07
COL7A1-204ENST00000462475 ZFP3Q96NJ6 502 aa14.61□□□□□ -0.07
COL7A1-204ENST00000462475 BTBD9Q96Q07 612 aa14.61□□□□□ -0.07
COL7A1-204ENST00000462475 UCN2Q96RP3 112 aa14.61□□□□□ -0.07
COL7A1-204ENST00000462475 ADOQ96SZ5 270 aa14.61□□□□□ -0.07
COL7A1-204ENST00000462475 TM9SF2Q99805 663 aa14.61□□□□□ -0.07
COL7A1-204ENST00000462475 VPS29Q9UBQ0 182 aa14.61□□□□□ -0.07
COL7A1-204ENST00000462475 WIF1Q9Y5W5 379 aa14.61□□□□□ -0.07
COL7A1-204ENST00000462475 SH3D21A4FU49 640 aa14.6□□□□□ -0.07
COL7A1-204ENST00000462475 C17orf51A8MQB3 221 aa14.6□□□□□ -0.07
COL7A1-204ENST00000462475 PLOD2O00469 737 aa14.6□□□□□ -0.07
COL7A1-204ENST00000462475 TSPAN2O60636 221 aa14.6□□□□□ -0.07
COL7A1-204ENST00000462475 CTAGE8P0CG41 777 aa14.6□□□□□ -0.07
COL7A1-204ENST00000462475 CT45A8P0DMV1 189 aa14.6□□□□□ -0.07
COL7A1-204ENST00000462475 CT45A9P0DMV2 189 aa14.6□□□□□ -0.07
COL7A1-204ENST00000462475 SRD5A2P31213 254 aa14.6□□□□□ -0.07
COL7A1-204ENST00000462475 HSD17B3P37058 310 aa14.6□□□□□ -0.07
COL7A1-204ENST00000462475 CLDN18P56856 261 aa14.6□□□□□ -0.07
COL7A1-204ENST00000462475 RAE1P78406 368 aaKnown RBP14.6□□□□□ -0.07
COL7A1-204ENST00000462475 CLCQ05315 142 aa14.6□□□□□ -0.07
COL7A1-204ENST00000462475 CT45A2Q5DJT8 189 aa14.6□□□□□ -0.07
COL7A1-204ENST00000462475 OR5M10Q6IEU7 315 aa14.6□□□□□ -0.07
COL7A1-204ENST00000462475 CTAGE4Q8IX94 777 aa14.6□□□□□ -0.07
COL7A1-204ENST00000462475 TMCO6Q96DC7 493 aa14.6□□□□□ -0.07
COL7A1-204ENST00000462475 VSTM2LQ96N03 204 aa14.6□□□□□ -0.07
COL7A1-204ENST00000462475 SFXN2Q96NB2 322 aa14.6□□□□□ -0.07
COL7A1-204ENST00000462475 DACH2Q96NX9 599 aa14.6□□□□□ -0.07
COL7A1-204ENST00000462475 NMRK1Q9NWW6 199 aa14.6□□□□□ -0.07
COL7A1-204ENST00000462475 DMGDHQ9UI17 866 aaKnown RBP14.6□□□□□ -0.07
COL7A1-204ENST00000462475 MCM8Q9UJA3 840 aa14.6□□□□□ -0.07
COL7A1-204ENST00000462475 ZNF180Q9UJW8 692 aa14.6□□□□□ -0.07
COL7A1-204ENST00000462475 DLGAP4Q9Y2H0 992 aa14.6□□□□□ -0.07
COL7A1-204ENST00000462475 MPDZO75970 2070 aa14.6□□□□□ -0.07
COL7A1-204ENST00000462475 PCDH7O60245 1069 aa14.59□□□□□ -0.07
COL7A1-204ENST00000462475 ABCB7O75027 752 aa14.59□□□□□ -0.07
COL7A1-204ENST00000462475 GOSR1O95249 250 aa14.59□□□□□ -0.07
COL7A1-204ENST00000462475 TGM6O95932 706 aa14.59□□□□□ -0.07
COL7A1-204ENST00000462475 HSD3B1P14060 373 aa14.59□□□□□ -0.07
COL7A1-204ENST00000462475 FOSL1P15407 271 aa14.59□□□□□ -0.07
COL7A1-204ENST00000462475 ZNF708P17019 499 aa14.59□□□□□ -0.07
COL7A1-204ENST00000462475 HSD3B2P26439 372 aa14.59□□□□□ -0.07
COL7A1-204ENST00000462475 ECHS1P30084 290 aa14.59□□□□□ -0.07
COL7A1-204ENST00000462475 HTR6P50406 440 aa14.59□□□□□ -0.07
COL7A1-204ENST00000462475 CSTF3Q12996 717 aaKnown RBP14.59□□□□□ -0.07
COL7A1-204ENST00000462475 UNC50Q53HI1 259 aa14.59□□□□□ -0.07
COL7A1-204ENST00000462475 TEX35Q5T0J7 233 aa14.59□□□□□ -0.07
COL7A1-204ENST00000462475 AAGABQ6PD74 315 aa14.59□□□□□ -0.07
COL7A1-204ENST00000462475 KRTAP1-3Q8IUG1 177 aa14.59□□□□□ -0.07
COL7A1-204ENST00000462475 GRAMD2AQ8IUY3 354 aa14.59□□□□□ -0.07
COL7A1-204ENST00000462475 RNF138Q8WVD3 245 aa14.59□□□□□ -0.07
COL7A1-204ENST00000462475 EXOSC8Q96B26 276 aaKnown RBP14.59□□□□□ -0.07
COL7A1-204ENST00000462475 TMEM237Q96Q45 408 aa14.59□□□□□ -0.07
COL7A1-204ENST00000462475 ZNF382Q96SR6 550 aa14.59□□□□□ -0.07
COL7A1-204ENST00000462475 FMO2Q99518 471 aa14.59□□□□□ -0.07
COL7A1-204ENST00000462475 ACPTQ9BZG2 426 aa14.59□□□□□ -0.07
COL7A1-204ENST00000462475 DKKL1Q9UK85 242 aa14.59□□□□□ -0.07
COL7A1-204ENST00000462475 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.58□□□□□ -0.08
COL7A1-204ENST00000462475 A0A1W2PNV4 684 aa14.58□□□□□ -0.08
COL7A1-204ENST00000462475 HCRTR2O43614 444 aa14.58□□□□□ -0.08
COL7A1-204ENST00000462475 TNFSF13O75888 250 aa14.58□□□□□ -0.08
COL7A1-204ENST00000462475 BCAS2O75934 225 aaPredicted RBP14.58□□□□□ -0.08
COL7A1-204ENST00000462475 SUPT7LO94864 414 aa14.58□□□□□ -0.08
COL7A1-204ENST00000462475 KRT6AP02538 564 aa14.58□□□□□ -0.08
COL7A1-204ENST00000462475 KRT6BP04259 564 aa14.58□□□□□ -0.08
COL7A1-204ENST00000462475 CD53P19397 219 aa14.58□□□□□ -0.08
COL7A1-204ENST00000462475 GRK2P25098 689 aa14.58□□□□□ -0.08
COL7A1-204ENST00000462475 IL12BP29460 328 aa14.58□□□□□ -0.08
COL7A1-204ENST00000462475 HOXC12P31275 282 aa14.58□□□□□ -0.08
COL7A1-204ENST00000462475 CPOXP36551 454 aa14.58□□□□□ -0.08
COL7A1-204ENST00000462475 KRT6CP48668 564 aa14.58□□□□□ -0.08
COL7A1-204ENST00000462475 GAS1P54826 345 aa14.58□□□□□ -0.08
COL7A1-204ENST00000462475 EFR3AQ14156 821 aa14.58□□□□□ -0.08
COL7A1-204ENST00000462475 RASA2Q15283 850 aa14.58□□□□□ -0.08
COL7A1-204ENST00000462475 ERCC6LQ2NKX8 1250 aa14.58□□□□□ -0.08
COL7A1-204ENST00000462475 ZNF678Q5SXM1 525 aa14.58□□□□□ -0.08
COL7A1-204ENST00000462475 GPRIN3Q6ZVF9 776 aa14.58□□□□□ -0.08
COL7A1-204ENST00000462475 LARP4Q71RC2 724 aaKnown RBP eCLIP14.58□□□□□ -0.08
COL7A1-204ENST00000462475 OR4N2Q8NGD1 307 aa14.58□□□□□ -0.08
COL7A1-204ENST00000462475 EFHD2Q96C19 240 aaPredicted RBP14.58□□□□□ -0.08
COL7A1-204ENST00000462475 ERP27Q96DN0 273 aa14.58□□□□□ -0.08
COL7A1-204ENST00000462475 APIPQ96GX9 242 aa14.58□□□□□ -0.08
COL7A1-204ENST00000462475 SMR3AQ99954 134 aa14.58□□□□□ -0.08
COL7A1-204ENST00000462475 ACBD3Q9H3P7 528 aa14.58□□□□□ -0.08
COL7A1-204ENST00000462475 PIGMQ9H3S5 423 aa14.58□□□□□ -0.08
COL7A1-204ENST00000462475 FOLH1BQ9HBA9 442 aa14.58□□□□□ -0.08
COL7A1-204ENST00000462475 PACSIN3Q9UKS6 424 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms