RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 KLRF1Q9NZS2 232 aa21.27■■□□□ 1
CBX3-204ENST00000456948 TINAGQ9UJW2 476 aa21.27■■□□□ 1
CBX3-204ENST00000456948 ICE1Q9Y2F5 2266 aa21.27■■□□□ 1
CBX3-204ENST00000456948 BCKDKO14874 412 aa21.26■□□□□ 0.99
CBX3-204ENST00000456948 HCN1O60741 890 aa21.26■□□□□ 0.99
CBX3-204ENST00000456948 IGHG3P01860 377 aa21.26■□□□□ 0.99
CBX3-204ENST00000456948 CT45A8P0DMV1 189 aa21.26■□□□□ 0.99
CBX3-204ENST00000456948 CT45A9P0DMV2 189 aa21.26■□□□□ 0.99
CBX3-204ENST00000456948 ELAVL4P26378 380 aaKnown RBP21.26■□□□□ 0.99
CBX3-204ENST00000456948 SOX18P35713 384 aa21.26■□□□□ 0.99
CBX3-204ENST00000456948 CASP3P42574 277 aa21.26■□□□□ 0.99
CBX3-204ENST00000456948 MAN2A2P49641 1150 aa21.26■□□□□ 0.99
CBX3-204ENST00000456948 PNLIPRP2P54317 469 aa21.26■□□□□ 0.99
CBX3-204ENST00000456948 BST1Q10588 318 aa21.26■□□□□ 0.99
CBX3-204ENST00000456948 PDE7AQ13946 482 aa21.26■□□□□ 0.99
CBX3-204ENST00000456948 VPS26BQ4G0F5 336 aa21.26■□□□□ 0.99
CBX3-204ENST00000456948 CYP27C1Q4G0S4 372 aa21.26■□□□□ 0.99
CBX3-204ENST00000456948 CT45A2Q5DJT8 189 aa21.26■□□□□ 0.99
CBX3-204ENST00000456948 AGBL2Q5U5Z8 902 aa21.26■□□□□ 0.99
CBX3-204ENST00000456948 HIST2H2BCQ6DN03 193 aa21.26■□□□□ 0.99
CBX3-204ENST00000456948 ANKRD26P1Q6NSI1 321 aa21.26■□□□□ 0.99
CBX3-204ENST00000456948 MAMDC2Q7Z304 686 aaPredicted RBP21.26■□□□□ 0.99
CBX3-204ENST00000456948 SARAFQ96BY9 339 aa21.26■□□□□ 0.99
CBX3-204ENST00000456948 TLCD1Q96CP7 247 aa21.26■□□□□ 0.99
CBX3-204ENST00000456948 C1orf50Q9BV19 199 aa21.26■□□□□ 0.99
CBX3-204ENST00000456948 ANKRA2Q9H9E1 313 aa21.26■□□□□ 0.99
CBX3-204ENST00000456948 Q9N2J8 555 aa21.26■□□□□ 0.99
CBX3-204ENST00000456948 ATP6V1HQ9UI12 483 aa21.26■□□□□ 0.99
CBX3-204ENST00000456948 DNAJC13O75165 2243 aa21.26■□□□□ 0.99
CBX3-204ENST00000456948 TRGV5A0A0B4J1U4 118 aa21.25■□□□□ 0.99
CBX3-204ENST00000456948 E9PLN8 166 aa21.25■□□□□ 0.99
CBX3-204ENST00000456948 UPK1AO00322 258 aa21.25■□□□□ 0.99
CBX3-204ENST00000456948 SCAMP2O15127 329 aaKnown RBP21.25■□□□□ 0.99
CBX3-204ENST00000456948 ZG16O60844 167 aa21.25■□□□□ 0.99
CBX3-204ENST00000456948 TRIM3O75382 744 aaPredicted RBP21.25■□□□□ 0.99
CBX3-204ENST00000456948 GDF1P27539 372 aa21.25■□□□□ 0.99
CBX3-204ENST00000456948 DECR1Q16698 335 aa21.25■□□□□ 0.99
CBX3-204ENST00000456948 PRSS53Q2L4Q9 553 aa21.25■□□□□ 0.99
CBX3-204ENST00000456948 LSM12Q3MHD2 195 aaKnown RBP21.25■□□□□ 0.99
CBX3-204ENST00000456948 DOPEY1Q5JWR5 2465 aa21.25■□□□□ 0.99
CBX3-204ENST00000456948 TMEM211Q6ICI0 200 aa21.25■□□□□ 0.99
CBX3-204ENST00000456948 XKRXQ6PP77 449 aa21.25■□□□□ 0.99
CBX3-204ENST00000456948 LARP4Q71RC2 724 aaKnown RBP eCLIP21.25■□□□□ 0.998e-8■□□□□ 10
CBX3-204ENST00000456948 TRILQ7L0X0 811 aa21.25■□□□□ 0.99
CBX3-204ENST00000456948 ZNF551Q7Z340 670 aaPredicted RBP21.25■□□□□ 0.99
CBX3-204ENST00000456948 HDXQ7Z353 690 aa21.25■□□□□ 0.99
CBX3-204ENST00000456948 DOLPP1Q86YN1 238 aa21.25■□□□□ 0.99
CBX3-204ENST00000456948 LRRC34Q8IZ02 419 aa21.25■□□□□ 0.99
CBX3-204ENST00000456948 CIDECQ96AQ7 238 aaPredicted RBP21.25■□□□□ 0.99
CBX3-204ENST00000456948 TMEM41AQ96HV5 264 aa21.25■□□□□ 0.99
CBX3-204ENST00000456948 VKORC1Q9BQB6 163 aa21.25■□□□□ 0.99
CBX3-204ENST00000456948 TP63Q9H3D4 680 aaPredicted RBP21.25■□□□□ 0.99
CBX3-204ENST00000456948 ACKR4Q9NPB9 350 aa21.25■□□□□ 0.99
CBX3-204ENST00000456948 HAO1Q9UJM8 370 aa21.25■□□□□ 0.99
CBX3-204ENST00000456948 MEMO1Q9Y316 297 aa21.25■□□□□ 0.99
CBX3-204ENST00000456948 ZNF407Q9C0G0 2248 aa21.24■□□□□ 0.99
CBX3-204ENST00000456948 A0A1B0GVC2 190 aa21.24■□□□□ 0.99
CBX3-204ENST00000456948 SLCO1B7G3V0H7 640 aa21.24■□□□□ 0.99
CBX3-204ENST00000456948 AQP7O14520 342 aa21.24■□□□□ 0.99
CBX3-204ENST00000456948 TRAPPC6AO75865 159 aa21.24■□□□□ 0.99
CBX3-204ENST00000456948 GCKP35557 465 aa21.24■□□□□ 0.99
CBX3-204ENST00000456948 CORO7P57737 925 aa21.24■□□□□ 0.99
CBX3-204ENST00000456948 PRR5P85299 388 aa21.24■□□□□ 0.99
CBX3-204ENST00000456948 MLC1Q15049 377 aa21.24■□□□□ 0.99
CBX3-204ENST00000456948 ZNF808Q8N4W9 903 aaPredicted RBP21.24■□□□□ 0.99
CBX3-204ENST00000456948 OR1J4Q8NGS1 313 aa21.24■□□□□ 0.99
CBX3-204ENST00000456948 SLC35A4Q96G79 324 aa21.24■□□□□ 0.99
CBX3-204ENST00000456948 CCDC120Q96HB5 630 aa21.24■□□□□ 0.99
CBX3-204ENST00000456948 ADOQ96SZ5 270 aa21.24■□□□□ 0.99
CBX3-204ENST00000456948 OSBPL11Q9BXB4 747 aa21.24■□□□□ 0.99
CBX3-204ENST00000456948 ZNF703Q9H7S9 590 aaPredicted RBP21.24■□□□□ 0.99
CBX3-204ENST00000456948 MANSC1Q9H8J5 431 aa21.24■□□□□ 0.99
CBX3-204ENST00000456948 ZNF395Q9H8N7 513 aaPredicted RBP21.24■□□□□ 0.99
CBX3-204ENST00000456948 PROK2Q9HC23 129 aa21.24■□□□□ 0.99
CBX3-204ENST00000456948 ASIC5Q9NY37 505 aa21.24■□□□□ 0.99
CBX3-204ENST00000456948 GIMAP2Q9UG22 337 aa21.24■□□□□ 0.99
CBX3-204ENST00000456948 ACAD8Q9UKU7 415 aa21.24■□□□□ 0.99
CBX3-204ENST00000456948 A0A1W2PRB8 838 aa21.23■□□□□ 0.99
CBX3-204ENST00000456948 FIGNL2A6NMB9 653 aa21.23■□□□□ 0.99
CBX3-204ENST00000456948 NPIPA2E9PIF3 369 aa21.23■□□□□ 0.99
CBX3-204ENST00000456948 NPIPA3F8WFD2 350 aa21.23■□□□□ 0.99
CBX3-204ENST00000456948 UGT2B11O75310 529 aa21.23■□□□□ 0.99
CBX3-204ENST00000456948 FRKP42685 505 aaPredicted RBP21.23■□□□□ 0.99
CBX3-204ENST00000456948 CLK3P49761 638 aaKnown RBP21.23■□□□□ 0.99
CBX3-204ENST00000456948 WDR4P57081 412 aaKnown RBP21.23■□□□□ 0.99
CBX3-204ENST00000456948 PTGR1Q14914 329 aa21.23■□□□□ 0.99
CBX3-204ENST00000456948 TOMM20Q15388 145 aa21.23■□□□□ 0.99
CBX3-204ENST00000456948 WLSQ5T9L3 541 aa21.23■□□□□ 0.99
CBX3-204ENST00000456948 SZRD1Q7Z422 152 aa21.23■□□□□ 0.99
CBX3-204ENST00000456948 MRGPRGQ86SM5 289 aa21.23■□□□□ 0.99
CBX3-204ENST00000456948 CD163Q86VB7 1156 aa21.23■□□□□ 0.99
CBX3-204ENST00000456948 PHF10Q8WUB8 498 aaKnown RBP21.23■□□□□ 0.99
CBX3-204ENST00000456948 HGDQ93099 445 aa21.23■□□□□ 0.99
CBX3-204ENST00000456948 PPP1R36Q96LQ0 422 aa21.23■□□□□ 0.99
CBX3-204ENST00000456948 SORT1Q99523 831 aa21.23■□□□□ 0.99
CBX3-204ENST00000456948 AKTIPQ9H8T0 292 aa21.23■□□□□ 0.99
CBX3-204ENST00000456948 CBLCQ9ULV8 474 aa21.23■□□□□ 0.99
CBX3-204ENST00000456948 PRAMEF25A6NGN4 478 aa21.22■□□□□ 0.99
CBX3-204ENST00000456948 TRPC5OSA6NMA1 111 aa21.22■□□□□ 0.99
CBX3-204ENST00000456948 EMC8O43402 210 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms