RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 MEIKINA0A087WXM9 373 aa9.71□□□□□ -0.86
CLIP4-208ENST00000456385 hCG_1807616A0A1W2PRN6 198 aa9.71□□□□□ -0.86
CLIP4-208ENST00000456385 LGALS8O00214 317 aa9.71□□□□□ -0.86
CLIP4-208ENST00000456385 ZNF821O75541 412 aaPredicted RBP9.71□□□□□ -0.86
CLIP4-208ENST00000456385 ANKRD34CP0C6C1 535 aa9.71□□□□□ -0.86
CLIP4-208ENST00000456385 UQCRC2P22695 453 aa9.71□□□□□ -0.86
CLIP4-208ENST00000456385 SHC1P29353 583 aa9.71□□□□□ -0.86
CLIP4-208ENST00000456385 TAP2Q03519 686 aa9.71□□□□□ -0.86
CLIP4-208ENST00000456385 GPR17Q13304 367 aa9.71□□□□□ -0.86
CLIP4-208ENST00000456385 SYPL1Q16563 259 aa9.71□□□□□ -0.86
CLIP4-208ENST00000456385 ZSWIM7Q19AV6 140 aa9.71□□□□□ -0.86
CLIP4-208ENST00000456385 RTP2Q5QGT7 225 aa9.71□□□□□ -0.86
CLIP4-208ENST00000456385 SLCO4C1Q6ZQN7 724 aa9.71□□□□□ -0.86
CLIP4-208ENST00000456385 DEFB132Q7Z7B7 95 aa9.71□□□□□ -0.86
CLIP4-208ENST00000456385 LRRC28Q86X40 367 aaPredicted RBP9.71□□□□□ -0.86
CLIP4-208ENST00000456385 SIAH3Q8IW03 269 aa9.71□□□□□ -0.86
CLIP4-208ENST00000456385 ZNF740Q8NDX6 193 aa9.71□□□□□ -0.86
CLIP4-208ENST00000456385 BBS1Q8NFJ9 593 aa9.71□□□□□ -0.86
CLIP4-208ENST00000456385 OR2T4Q8NH00 348 aa9.71□□□□□ -0.86
CLIP4-208ENST00000456385 VOPP1Q96AW1 172 aa9.71□□□□□ -0.86
CLIP4-208ENST00000456385 SIPA1Q96FS4 1042 aa9.71□□□□□ -0.86
CLIP4-208ENST00000456385 ZNF649Q9BS31 505 aa9.71□□□□□ -0.86
CLIP4-208ENST00000456385 FNDC11Q9BVV2 318 aa9.71□□□□□ -0.86
CLIP4-208ENST00000456385 CACNG6Q9BXT2 260 aa9.71□□□□□ -0.86
CLIP4-208ENST00000456385 METTL17Q9H7H0 456 aaPredicted RBP9.71□□□□□ -0.86
CLIP4-208ENST00000456385 MCCC2Q9HCC0 563 aa9.71□□□□□ -0.86
CLIP4-208ENST00000456385 MIEF1Q9NQG6 463 aa9.71□□□□□ -0.86
CLIP4-208ENST00000456385 LYARQ9NX58 379 aaKnown RBP9.71□□□□□ -0.86
CLIP4-208ENST00000456385 PTGFRNQ9P2B2 879 aa9.71□□□□□ -0.86
CLIP4-208ENST00000456385 PRKAB1Q9Y478 270 aa9.71□□□□□ -0.86
CLIP4-208ENST00000456385 SIRT4Q9Y6E7 314 aaPredicted RBP9.71□□□□□ -0.86
CLIP4-208ENST00000456385 STON1Q9Y6Q2 735 aa9.71□□□□□ -0.86
CLIP4-208ENST00000456385 A0A1W2PRG6 482 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 A0A1W2PRQ8 180 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 PRAMEF27A3QJZ7 478 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 HMGN4O00479 90 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 ADAM12O43184 909 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 ATG13O75143 517 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 SULT1A3P0DMM9 295 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 SULT1A4P0DMN0 295 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 POU3F2P20265 443 aaPredicted RBP9.7□□□□□ -0.86
CLIP4-208ENST00000456385 ZP3P21754 424 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 KELP23276 732 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 CFL1P23528 166 aaKnown RBP9.7□□□□□ -0.86
CLIP4-208ENST00000456385 THBS2P35442 1172 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 RFX3P48380 749 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 CDH11P55287 796 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 HSPB3Q12988 150 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 SLBPQ14493 270 aaKnown RBP eCLIP9.7□□□□□ -0.86
CLIP4-208ENST00000456385 TPRG1Q6ZUI0 275 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 OAFQ86UD1 273 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 ZNF527Q8NB42 609 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 MORN4Q8NDC4 146 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 ADAMTS19Q8TE59 1207 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 ASZ1Q8WWH4 475 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 PLD4Q96BZ4 506 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 CHFRQ96EP1 664 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 CXorf58Q96LI9 332 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 ZNF578Q96N58 590 aaPredicted RBP9.7□□□□□ -0.86
CLIP4-208ENST00000456385 SMAD5Q99717 465 aaKnown RBP9.7□□□□□ -0.86
CLIP4-208ENST00000456385 TREX2Q9BQ50 279 aaPredicted RBP9.7□□□□□ -0.86
CLIP4-208ENST00000456385 SHARPINQ9H0F6 387 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 NKIRAS2Q9NYR9 191 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 OR6C2Q9NZP2 312 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 CNIH4Q9P003 139 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 IL20RAQ9UHF4 553 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 CLEC4EQ9ULY5 219 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 MRPS7Q9Y2R9 242 aaKnown RBP9.7□□□□□ -0.86
CLIP4-208ENST00000456385 NUBP2Q9Y5Y2 271 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 HTTP42858 3142 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 PLXNB3Q9ULL4 1909 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.7□□□□□ -0.86
CLIP4-208ENST00000456385 MFSD2BA6NFX1 497 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 POM121CA8CG34 1229 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 SYN3O14994 580 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 SEPT4O43236 478 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 MTRF1O75570 445 aaKnown RBP9.7□□□□□ -0.86
CLIP4-208ENST00000456385 SOX30O94993 753 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 MT-ND4P03905 459 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 IFNA16P05015 189 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 GJA1P17302 382 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 ACSL1P33121 698 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 NUP62P37198 522 aaPredicted RBP9.7□□□□□ -0.86
CLIP4-208ENST00000456385 DGCR2P98153 550 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 BAMBIQ13145 260 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 CKAP5Q14008 2032 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 ZNF273Q14593 569 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 SLC27A4Q6P1M0 643 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 C1orf94Q6P1W5 598 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 PRSS55Q6UWB4 352 aaPredicted RBP9.7□□□□□ -0.86
CLIP4-208ENST00000456385 NLRC3Q7RTR2 1065 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 STPG2Q8N412 459 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 TOMM5Q8N4H5 51 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 FBXO15Q8NCQ5 510 aaPredicted RBP9.7□□□□□ -0.86
CLIP4-208ENST00000456385 OR5D16Q8NGK9 328 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 OR6T1Q8NGN1 323 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 SCRN2Q96FV2 425 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 ZFP3Q96NJ6 502 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 DDOQ99489 341 aa9.7□□□□□ -0.86
CLIP4-208ENST00000456385 CHIAQ9BZP6 476 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms