RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 ZNF578Q96N58 590 aaPredicted RBP5.58□□□□□ -1.52
SDC4P-201ENST00000453285 TRNT1Q96Q11 434 aaKnown RBP5.58□□□□□ -1.52
SDC4P-201ENST00000453285 PHOX2BQ99453 314 aa5.58□□□□□ -1.52
SDC4P-201ENST00000453285 STACQ99469 402 aa5.58□□□□□ -1.52
SDC4P-201ENST00000453285 SDF2Q99470 211 aa5.58□□□□□ -1.52
SDC4P-201ENST00000453285 SPSB2Q99619 263 aa5.58□□□□□ -1.52
SDC4P-201ENST00000453285 CMKLR1Q99788 373 aa5.58□□□□□ -1.52
SDC4P-201ENST00000453285 SLC29A1Q99808 456 aa5.58□□□□□ -1.52
SDC4P-201ENST00000453285 TREX2Q9BQ50 279 aaPredicted RBP5.58□□□□□ -1.52
SDC4P-201ENST00000453285 MESP1Q9BRJ9 268 aa5.58□□□□□ -1.52
SDC4P-201ENST00000453285 SLC7A5P2Q9GIP4 190 aa5.58□□□□□ -1.52
SDC4P-201ENST00000453285 SAP130Q9H0E3 1048 aa5.58□□□□□ -1.52
SDC4P-201ENST00000453285 OR10A5Q9H207 317 aa5.58□□□□□ -1.52
SDC4P-201ENST00000453285 SEMA6AQ9H2E6 1030 aa5.58□□□□□ -1.52
SDC4P-201ENST00000453285 IL1RAPQ9NPH3 570 aa5.58□□□□□ -1.52
SDC4P-201ENST00000453285 DUSP22Q9NRW4 184 aa5.58□□□□□ -1.52
SDC4P-201ENST00000453285 PNO1Q9NRX1 252 aaKnown RBP5.58□□□□□ -1.52
SDC4P-201ENST00000453285 C14orf105Q9NVL8 296 aa5.58□□□□□ -1.52
SDC4P-201ENST00000453285 FBXO34Q9NWN3 711 aa5.58□□□□□ -1.52
SDC4P-201ENST00000453285 ADPRHL2Q9NX46 363 aa5.58□□□□□ -1.52
SDC4P-201ENST00000453285 MKL2Q9ULH7 1088 aa5.58□□□□□ -1.52
SDC4P-201ENST00000453285 ERVK-19Q9WJR5 959 aa5.58□□□□□ -1.52
SDC4P-201ENST00000453285 LIPT1Q9Y234 373 aa5.58□□□□□ -1.52
SDC4P-201ENST00000453285 DTX4Q9Y2E6 619 aa5.58□□□□□ -1.52
SDC4P-201ENST00000453285 CHST2Q9Y4C5 530 aa5.58□□□□□ -1.52
SDC4P-201ENST00000453285 LOXL2Q9Y4K0 774 aa5.58□□□□□ -1.52
SDC4P-201ENST00000453285 LRRC42Q9Y546 428 aa5.58□□□□□ -1.52
SDC4P-201ENST00000453285 PCDHGA8Q9Y5G5 932 aa5.58□□□□□ -1.52
SDC4P-201ENST00000453285 HEMK1Q9Y5R4 338 aaPredicted RBP5.58□□□□□ -1.52
SDC4P-201ENST00000453285 B3GALT1Q9Y5Z6 326 aa5.58□□□□□ -1.52
SDC4P-201ENST00000453285 CNTRLQ7Z7A1 2325 aa5.58□□□□□ -1.52
SDC4P-201ENST00000453285 BAHCC1Q9P281 2608 aa5.58□□□□□ -1.52
SDC4P-201ENST00000453285 CCDC187A0A096LP49 1063 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 TEX51A0A1B0GUA7 166 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.57□□□□□ -1.52
SDC4P-201ENST00000453285 IDSB3KWA1 339 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 C9orf172C9J069 976 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 C5orf58C9J3I9 102 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 DPM1O60762 260 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 PRAMEF2O60811 474 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 ALOX12BO75342 701 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 PDE9AO76083 593 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 DLGAP3O95886 979 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 CST1P01037 141 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 LDLRP01130 860 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 IFNA14P01570 189 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 IGKV1D-16P01601 117 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 IFNA16P05015 189 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 FESP07332 822 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 GUSBP08236 651 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 CYC1P08574 325 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 CT45A8P0DMV1 189 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 CT45A9P0DMV2 189 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 FCGR1AP12314 374 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 HOXB6P17509 224 aaKnown RBP5.57□□□□□ -1.52
SDC4P-201ENST00000453285 TNNI3P19429 210 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 TNFRSF1BP20333 461 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 AGXTP21549 392 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 RPS4Y1P22090 263 aaKnown RBP5.57□□□□□ -1.52
SDC4P-201ENST00000453285 GABRA3P34903 492 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 PGDP52209 483 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 CRISP3P54108 245 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 EMP2P54851 167 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 RAB15P59190 212 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 POU6F2P78424 691 aaPredicted RBP5.57□□□□□ -1.52
SDC4P-201ENST00000453285 OCA2Q04671 838 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 GNA13Q14344 377 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 NSDHLQ15738 373 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 LRRC36Q1X8D7 754 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 CYP27C1Q4G0S4 372 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 GPAT3Q53EU6 434 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 IFI44LQ53G44 452 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 CT45A2Q5DJT8 189 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 CCNJQ5T5M9 372 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 DCAF12Q5T6F0 453 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 ATAD3BQ5T9A4 648 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 MFSD4BQ5TF39 518 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 HES3Q5TGS1 186 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 MLIPQ5VWP3 458 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 TYW3Q6IPR3 259 aaKnown RBP5.57□□□□□ -1.52
SDC4P-201ENST00000453285 TBPL2Q6SJ96 375 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 TMEM205Q6UW68 189 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 FAM198BQ6UWH4 519 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 FKBP9P1Q75LS8 142 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 ASCL5Q7RTU5 278 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 TIPARPQ7Z3E1 657 aaKnown RBP5.57□□□□□ -1.52
SDC4P-201ENST00000453285 ANKRD37Q7Z713 158 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 TMEM179BQ7Z7N9 219 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 ARMC8Q8IUR7 673 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 EPHX4Q8IUS5 362 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 CACTIN-AS1Q8N1I8 211 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 SMYD1Q8NB12 490 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 MORN4Q8NDC4 146 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 NFAM1Q8NET5 270 aaPredicted RBP5.57□□□□□ -1.52
SDC4P-201ENST00000453285 OR7G1Q8NGA0 311 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 OR4N2Q8NGD1 307 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 OR4D11Q8NGI4 311 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 C16orf52Q8NHV5 167 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 SLC2A12Q8TD20 617 aa5.57□□□□□ -1.52
SDC4P-201ENST00000453285 PIK3R3Q92569 461 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms