RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 NUP107P57740 925 aa18.91■□□□□ 0.62
HSPG2-205ENST00000427897 KIAA0040Q15053 153 aa18.91■□□□□ 0.62
HSPG2-205ENST00000427897 RNF165Q6ZSG1 346 aa18.91■□□□□ 0.62
HSPG2-205ENST00000427897 Q6ZSR9 355 aa18.91■□□□□ 0.62
HSPG2-205ENST00000427897 LARP4Q71RC2 724 aaKnown RBP eCLIP18.91■□□□□ 0.62
HSPG2-205ENST00000427897 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.91■□□□□ 0.62
HSPG2-205ENST00000427897 PPP3R2Q96LZ3 170 aa18.91■□□□□ 0.62
HSPG2-205ENST00000427897 BTBD9Q96Q07 612 aa18.91■□□□□ 0.62
HSPG2-205ENST00000427897 TUBB1Q9H4B7 451 aa18.91■□□□□ 0.62
HSPG2-205ENST00000427897 GLIPR2Q9H4G4 154 aa18.91■□□□□ 0.62
HSPG2-205ENST00000427897 REEP4Q9H6H4 257 aa18.91■□□□□ 0.62
HSPG2-205ENST00000427897 VIPAS39Q9H9C1 493 aa18.91■□□□□ 0.62
HSPG2-205ENST00000427897 KCNK9Q9NPC2 374 aa18.91■□□□□ 0.62
HSPG2-205ENST00000427897 MRTO4Q9UKD2 239 aaKnown RBP18.91■□□□□ 0.62
HSPG2-205ENST00000427897 MAPRE3Q9UPY8 281 aa18.91■□□□□ 0.62
HSPG2-205ENST00000427897 RNF6Q9Y252 685 aa18.91■□□□□ 0.62
HSPG2-205ENST00000427897 C15orf41Q9Y2V0 281 aa18.91■□□□□ 0.62
HSPG2-205ENST00000427897 DOPEY1Q5JWR5 2465 aa18.91■□□□□ 0.62
HSPG2-205ENST00000427897 SPTAN1Q13813 2472 aaKnown RBP18.9■□□□□ 0.62
HSPG2-205ENST00000427897 A0A087WV62 115 aa18.9■□□□□ 0.62
HSPG2-205ENST00000427897 WDR91A4D1P6 747 aa18.9■□□□□ 0.62
HSPG2-205ENST00000427897 TMEM233B4DJY2 109 aa18.9■□□□□ 0.62
HSPG2-205ENST00000427897 FAM47E-STBD1D6RA91 191 aa18.9■□□□□ 0.62
HSPG2-205ENST00000427897 PIP5K1BO14986 540 aa18.9■□□□□ 0.62
HSPG2-205ENST00000427897 PEX11AO75192 247 aa18.9■□□□□ 0.62
HSPG2-205ENST00000427897 NME6O75414 186 aaPredicted RBP18.9■□□□□ 0.62
HSPG2-205ENST00000427897 CT45A8P0DMV1 189 aa18.9■□□□□ 0.62
HSPG2-205ENST00000427897 CT45A9P0DMV2 189 aa18.9■□□□□ 0.62
HSPG2-205ENST00000427897 TACR1P25103 407 aa18.9■□□□□ 0.62
HSPG2-205ENST00000427897 SOX18P35713 384 aa18.9■□□□□ 0.62
HSPG2-205ENST00000427897 ASMTP46597 345 aa18.9■□□□□ 0.62
HSPG2-205ENST00000427897 MANFP55145 182 aaKnown RBP18.9■□□□□ 0.62
HSPG2-205ENST00000427897 HSPB3Q12988 150 aa18.9■□□□□ 0.62
HSPG2-205ENST00000427897 ATP6AP1LQ52LC2 224 aa18.9■□□□□ 0.62
HSPG2-205ENST00000427897 RFTN2Q52LD8 501 aaPredicted RBP18.9■□□□□ 0.62
HSPG2-205ENST00000427897 CT45A2Q5DJT8 189 aa18.9■□□□□ 0.62
HSPG2-205ENST00000427897 C1orf185Q5T7R7 199 aa18.9■□□□□ 0.62
HSPG2-205ENST00000427897 TIGD3Q6B0B8 471 aa18.9■□□□□ 0.62
HSPG2-205ENST00000427897 DESI1Q6ICB0 168 aa18.9■□□□□ 0.62
HSPG2-205ENST00000427897 SZRD1Q7Z422 152 aa18.9■□□□□ 0.62
HSPG2-205ENST00000427897 OR2T11Q8NH01 316 aa18.9■□□□□ 0.62
HSPG2-205ENST00000427897 CLHC1Q8NHS4 586 aa18.9■□□□□ 0.62
HSPG2-205ENST00000427897 HGDQ93099 445 aa18.9■□□□□ 0.62
HSPG2-205ENST00000427897 VSTM2LQ96N03 204 aa18.9■□□□□ 0.62
HSPG2-205ENST00000427897 AMDHD1Q96NU7 426 aa18.9■□□□□ 0.62
HSPG2-205ENST00000427897 KCNJ16Q9NPI9 418 aa18.9■□□□□ 0.62
HSPG2-205ENST00000427897 SPRR3Q9UBC9 169 aa18.9■□□□□ 0.62
HSPG2-205ENST00000427897 BAIAP2L1Q9UHR4 511 aa18.9■□□□□ 0.62
HSPG2-205ENST00000427897 FAM90A27PA6NNH2 459 aa18.89■□□□□ 0.61
HSPG2-205ENST00000427897 NPIPB8E9PQR5 432 aa18.89■□□□□ 0.61
HSPG2-205ENST00000427897 LSM1O15116 133 aaKnown RBP18.89■□□□□ 0.61
HSPG2-205ENST00000427897 HSPA4LO95757 839 aa18.89■□□□□ 0.61
HSPG2-205ENST00000427897 CDK9P50750 372 aaKnown RBP18.89■□□□□ 0.61
HSPG2-205ENST00000427897 PRKAG1P54619 331 aa18.89■□□□□ 0.61
HSPG2-205ENST00000427897 SF3B4Q15427 424 aaKnown RBP eCLIP18.89■□□□□ 0.618e-9■■■■■ 81.5
HSPG2-205ENST00000427897 PRSS53Q2L4Q9 553 aa18.89■□□□□ 0.61
HSPG2-205ENST00000427897 ANKRD26P1Q6NSI1 321 aa18.89■□□□□ 0.61
HSPG2-205ENST00000427897 TMEM81Q6P7N7 255 aa18.89■□□□□ 0.61
HSPG2-205ENST00000427897 R3HCC1LQ7Z5L2 792 aaKnown RBP18.89■□□□□ 0.61
HSPG2-205ENST00000427897 MCEMP1Q8IX19 187 aa18.89■□□□□ 0.61
HSPG2-205ENST00000427897 PM20D2Q8IYS1 436 aa18.89■□□□□ 0.61
HSPG2-205ENST00000427897 RPRMLQ8N4K4 120 aa18.89■□□□□ 0.61
HSPG2-205ENST00000427897 MARVELD2Q8N4S9 558 aa18.89■□□□□ 0.61
HSPG2-205ENST00000427897 ELP4Q96EB1 424 aa18.89■□□□□ 0.61
HSPG2-205ENST00000427897 ZBED6CLQ96FA7 236 aaPredicted RBP18.89■□□□□ 0.61
HSPG2-205ENST00000427897 TTYH2Q9BSA4 534 aa18.89■□□□□ 0.61
HSPG2-205ENST00000427897 C3orf14Q9HBI5 128 aa18.89■□□□□ 0.61
HSPG2-205ENST00000427897 GALNT9Q9HCQ5 603 aa18.89■□□□□ 0.61
HSPG2-205ENST00000427897 Q9N2J8 555 aa18.89■□□□□ 0.61
HSPG2-205ENST00000427897 C19orf53Q9UNZ5 99 aaPredicted RBP18.89■□□□□ 0.61
HSPG2-205ENST00000427897 CAMK2AQ9UQM7 478 aa18.89■□□□□ 0.61
HSPG2-205ENST00000427897 ACTL7BQ9Y614 415 aa18.89■□□□□ 0.61
HSPG2-205ENST00000427897 PLOD2O00469 737 aa18.88■□□□□ 0.61
HSPG2-205ENST00000427897 TYROBPO43914 113 aa18.88■□□□□ 0.61
HSPG2-205ENST00000427897 SKAP2O75563 359 aaPredicted RBP18.88■□□□□ 0.61
HSPG2-205ENST00000427897 CBR3O75828 277 aa18.88■□□□□ 0.61
HSPG2-205ENST00000427897 HPNP05981 417 aa18.88■□□□□ 0.61
HSPG2-205ENST00000427897 SDC1P18827 310 aa18.88■□□□□ 0.61
HSPG2-205ENST00000427897 HPCAL1P37235 193 aa18.88■□□□□ 0.61
HSPG2-205ENST00000427897 CLK3P49761 638 aaKnown RBP18.88■□□□□ 0.61
HSPG2-205ENST00000427897 PNLIPRP2P54317 469 aa18.88■□□□□ 0.61
HSPG2-205ENST00000427897 CDSNQ15517 529 aa18.88■□□□□ 0.61
HSPG2-205ENST00000427897 DECR1Q16698 335 aa18.88■□□□□ 0.61
HSPG2-205ENST00000427897 WIPI1Q5MNZ9 446 aaPredicted RBP18.88■□□□□ 0.61
HSPG2-205ENST00000427897 ZNF551Q7Z340 670 aaPredicted RBP18.88■□□□□ 0.61
HSPG2-205ENST00000427897 CCDC71Q8IV32 467 aaPredicted RBP18.88■□□□□ 0.61
HSPG2-205ENST00000427897 OR14L1PQ8NHC6 308 aa18.88■□□□□ 0.61
HSPG2-205ENST00000427897 ZBTB9Q96C00 473 aa18.88■□□□□ 0.61
HSPG2-205ENST00000427897 EFHD2Q96C19 240 aaPredicted RBP18.88■□□□□ 0.61
HSPG2-205ENST00000427897 SSU72Q9NP77 194 aaKnown RBP18.88■□□□□ 0.61
HSPG2-205ENST00000427897 EXO1Q9UQ84 846 aaKnown RBP18.88■□□□□ 0.61
HSPG2-205ENST00000427897 SLC6A5Q9Y345 797 aa18.88■□□□□ 0.61
HSPG2-205ENST00000427897 NCKAP5O14513 1909 aa18.88■□□□□ 0.61
HSPG2-205ENST00000427897 EXPH5Q8NEV8 1989 aa18.88■□□□□ 0.61
HSPG2-205ENST00000427897 NCOA6Q14686 2063 aaPredicted RBP18.88■□□□□ 0.61
HSPG2-205ENST00000427897 AHRRA9YTQ3 701 aa18.87■□□□□ 0.61
HSPG2-205ENST00000427897 UPK1AO00322 258 aa18.87■□□□□ 0.61
HSPG2-205ENST00000427897 TM9SF1O15321 606 aa18.87■□□□□ 0.61
HSPG2-205ENST00000427897 TSPAN2O60636 221 aa18.87■□□□□ 0.61
HSPG2-205ENST00000427897 BCKDHAP12694 445 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms