RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 NUP54Q7Z3B4 507 aa20.48■□□□□ 0.87
PTCHD3P2-201ENST00000424937 KRTCAP2Q8N6L1 136 aa20.48■□□□□ 0.87
PTCHD3P2-201ENST00000424937 RAB3IL1Q8TBN0 382 aa20.48■□□□□ 0.87
PTCHD3P2-201ENST00000424937 HGDQ93099 445 aa20.48■□□□□ 0.87
PTCHD3P2-201ENST00000424937 ATP6V1G3Q96LB4 118 aa20.48■□□□□ 0.87
PTCHD3P2-201ENST00000424937 EQTNQ9NQ60 294 aa20.48■□□□□ 0.87
PTCHD3P2-201ENST00000424937 ACSS1Q9NUB1 689 aaPredicted RBP20.48■□□□□ 0.87
PTCHD3P2-201ENST00000424937 MARCOQ9UEW3 520 aaPredicted RBP20.48■□□□□ 0.87
PTCHD3P2-201ENST00000424937 PCNX1Q96RV3 2341 aa20.48■□□□□ 0.87
PTCHD3P2-201ENST00000424937 CELA3AP09093 270 aa20.47■□□□□ 0.87
PTCHD3P2-201ENST00000424937 IFI6P09912 130 aa20.47■□□□□ 0.87
PTCHD3P2-201ENST00000424937 RFPL3SP0C7P2 107 aa20.47■□□□□ 0.87
PTCHD3P2-201ENST00000424937 LAMP1P11279 417 aa20.47■□□□□ 0.87
PTCHD3P2-201ENST00000424937 IL12BP29460 328 aa20.47■□□□□ 0.87
PTCHD3P2-201ENST00000424937 PTGS2P35354 604 aa20.47■□□□□ 0.87
PTCHD3P2-201ENST00000424937 CASP3P42574 277 aa20.47■□□□□ 0.87
PTCHD3P2-201ENST00000424937 MASP1P48740 699 aa20.47■□□□□ 0.87
PTCHD3P2-201ENST00000424937 PSG6Q00889 435 aa20.47■□□□□ 0.87
PTCHD3P2-201ENST00000424937 SMU1Q2TAY7 513 aa20.47■□□□□ 0.87
PTCHD3P2-201ENST00000424937 TMEM198Q66K66 360 aa20.47■□□□□ 0.87
PTCHD3P2-201ENST00000424937 ARHGAP11AQ6P4F7 1023 aa20.47■□□□□ 0.87
PTCHD3P2-201ENST00000424937 PAOXQ6QHF9 649 aa20.47■□□□□ 0.87
PTCHD3P2-201ENST00000424937 WDR53Q7Z5U6 358 aaPredicted RBP20.47■□□□□ 0.87
PTCHD3P2-201ENST00000424937 GOLGA6L1Q8N7Z2 621 aa20.47■□□□□ 0.87
PTCHD3P2-201ENST00000424937 COL21A1Q96P44 957 aa20.47■□□□□ 0.87
PTCHD3P2-201ENST00000424937 PSMG3-AS1Q96PY0 264 aa20.47■□□□□ 0.87
PTCHD3P2-201ENST00000424937 NODALQ96S42 347 aa20.47■□□□□ 0.87
PTCHD3P2-201ENST00000424937 ANGPTL4Q9BY76 406 aa20.47■□□□□ 0.87
PTCHD3P2-201ENST00000424937 MANSC1Q9H8J5 431 aa20.47■□□□□ 0.87
PTCHD3P2-201ENST00000424937 MEAF6Q9HAF1 191 aa20.47■□□□□ 0.87
PTCHD3P2-201ENST00000424937 PLSCR2Q9NRY7 297 aa20.47■□□□□ 0.87
PTCHD3P2-201ENST00000424937 ATAD3AQ9NVI7 634 aa20.47■□□□□ 0.87
PTCHD3P2-201ENST00000424937 ASIC5Q9NY37 505 aa20.47■□□□□ 0.87
PTCHD3P2-201ENST00000424937 SUCOQ9UBS9 1254 aaKnown RBP20.47■□□□□ 0.87
PTCHD3P2-201ENST00000424937 B4GALT7Q9UBV7 327 aa20.47■□□□□ 0.87
PTCHD3P2-201ENST00000424937 NCOA6Q14686 2063 aaPredicted RBP20.46■□□□□ 0.87
PTCHD3P2-201ENST00000424937 A1L4Q6 167 aa20.46■□□□□ 0.87
PTCHD3P2-201ENST00000424937 WIPF3A6NGB9 483 aa20.46■□□□□ 0.87
PTCHD3P2-201ENST00000424937 OR6C70A6NIJ9 312 aa20.46■□□□□ 0.87
PTCHD3P2-201ENST00000424937 PRRG2O14669 202 aa20.46■□□□□ 0.87
PTCHD3P2-201ENST00000424937 ZG16O60844 167 aa20.46■□□□□ 0.87
PTCHD3P2-201ENST00000424937 TRIM3O75382 744 aaPredicted RBP20.46■□□□□ 0.87
PTCHD3P2-201ENST00000424937 TPOP07202 933 aa20.46■□□□□ 0.87
PTCHD3P2-201ENST00000424937 KITP10721 976 aa20.46■□□□□ 0.87
PTCHD3P2-201ENST00000424937 PRPS1L1P21108 318 aa20.46■□□□□ 0.87
PTCHD3P2-201ENST00000424937 PSPHP78330 225 aa20.46■□□□□ 0.87
PTCHD3P2-201ENST00000424937 ZNHIT3Q15649 155 aaPredicted RBP20.46■□□□□ 0.87
PTCHD3P2-201ENST00000424937 CPTPQ5TA50 214 aa20.46■□□□□ 0.87
PTCHD3P2-201ENST00000424937 CD163Q86VB7 1156 aa20.46■□□□□ 0.87
PTCHD3P2-201ENST00000424937 OR4N2Q8NGD1 307 aa20.46■□□□□ 0.87
PTCHD3P2-201ENST00000424937 NUDT8Q8WV74 236 aa20.46■□□□□ 0.87
PTCHD3P2-201ENST00000424937 ADOQ96SZ5 270 aa20.46■□□□□ 0.87
PTCHD3P2-201ENST00000424937 OSBPL11Q9BXB4 747 aa20.46■□□□□ 0.87
PTCHD3P2-201ENST00000424937 KLRF1Q9NZS2 232 aa20.46■□□□□ 0.87
PTCHD3P2-201ENST00000424937 PRAMEF25A6NGN4 478 aa20.45■□□□□ 0.86
PTCHD3P2-201ENST00000424937 ABCB7O75027 752 aa20.45■□□□□ 0.86
PTCHD3P2-201ENST00000424937 SNX4O95219 450 aa20.45■□□□□ 0.86
PTCHD3P2-201ENST00000424937 GDF1P27539 372 aa20.45■□□□□ 0.86
PTCHD3P2-201ENST00000424937 PRKAG1P54619 331 aa20.45■□□□□ 0.86
PTCHD3P2-201ENST00000424937 DIO3P55073 304 aa20.45■□□□□ 0.86
PTCHD3P2-201ENST00000424937 LARP4Q71RC2 724 aaKnown RBP eCLIP20.45■□□□□ 0.86
PTCHD3P2-201ENST00000424937 PACS2Q86VP3 889 aa20.45■□□□□ 0.86
PTCHD3P2-201ENST00000424937 NUP43Q8NFH3 380 aa20.45■□□□□ 0.86
PTCHD3P2-201ENST00000424937 FAM57AQ8TBR7 257 aa20.45■□□□□ 0.86
PTCHD3P2-201ENST00000424937 EFHD2Q96C19 240 aaPredicted RBP20.45■□□□□ 0.86
PTCHD3P2-201ENST00000424937 SLC35A4Q96G79 324 aa20.45■□□□□ 0.86
PTCHD3P2-201ENST00000424937 PRPF18Q99633 342 aaKnown RBP20.45■□□□□ 0.86
PTCHD3P2-201ENST00000424937 SH3GL2Q99962 352 aa20.45■□□□□ 0.86
PTCHD3P2-201ENST00000424937 LDAHQ9H6V9 325 aa20.45■□□□□ 0.86
PTCHD3P2-201ENST00000424937 EXO5Q9H790 373 aa20.45■□□□□ 0.86
PTCHD3P2-201ENST00000424937 VIPAS39Q9H9C1 493 aa20.45■□□□□ 0.86
PTCHD3P2-201ENST00000424937 GALNT9Q9HCQ5 603 aa20.45■□□□□ 0.86
PTCHD3P2-201ENST00000424937 Q9N2J8 555 aa20.45■□□□□ 0.86
PTCHD3P2-201ENST00000424937 A0A1W2PRB8 838 aa20.44■□□□□ 0.86
PTCHD3P2-201ENST00000424937 TSPAN2O60636 221 aa20.44■□□□□ 0.86
PTCHD3P2-201ENST00000424937 IGHG3P01860 377 aa20.44■□□□□ 0.86
PTCHD3P2-201ENST00000424937 ESRRAP11474 423 aaPredicted RBP20.44■□□□□ 0.86
PTCHD3P2-201ENST00000424937 LBPP18428 481 aa20.44■□□□□ 0.86
PTCHD3P2-201ENST00000424937 CLDN8P56748 225 aa20.44■□□□□ 0.86
PTCHD3P2-201ENST00000424937 OCRLQ01968 901 aa20.44■□□□□ 0.86
PTCHD3P2-201ENST00000424937 EFR3AQ14156 821 aa20.44■□□□□ 0.86
PTCHD3P2-201ENST00000424937 SLC10A1Q14973 349 aa20.44■□□□□ 0.86
PTCHD3P2-201ENST00000424937 TRILQ7L0X0 811 aa20.44■□□□□ 0.86
PTCHD3P2-201ENST00000424937 RIMKLAQ8IXN7 391 aa20.44■□□□□ 0.86
PTCHD3P2-201ENST00000424937 TMCO6Q96DC7 493 aa20.44■□□□□ 0.86
PTCHD3P2-201ENST00000424937 CCDC120Q96HB5 630 aa20.44■□□□□ 0.86
PTCHD3P2-201ENST00000424937 TMEM41AQ96HV5 264 aa20.44■□□□□ 0.86
PTCHD3P2-201ENST00000424937 MS4A4EQ96PG1 132 aa20.44■□□□□ 0.86
PTCHD3P2-201ENST00000424937 LMF2Q9BU23 707 aaKnown RBP20.44■□□□□ 0.86
PTCHD3P2-201ENST00000424937 C3orf14Q9HBI5 128 aa20.44■□□□□ 0.86
PTCHD3P2-201ENST00000424937 CBLCQ9ULV8 474 aa20.44■□□□□ 0.86
PTCHD3P2-201ENST00000424937 PHF3Q92576 2039 aaKnown RBP20.44■□□□□ 0.86
PTCHD3P2-201ENST00000424937 UTP20O75691 2785 aaKnown RBP20.43■□□□□ 0.86
PTCHD3P2-201ENST00000424937 NPIPA2E9PIF3 369 aa20.43■□□□□ 0.86
PTCHD3P2-201ENST00000424937 NPIPA3F8WFD2 350 aa20.43■□□□□ 0.86
PTCHD3P2-201ENST00000424937 SDHDO14521 159 aa20.43■□□□□ 0.86
PTCHD3P2-201ENST00000424937 GNB5O14775 395 aa20.43■□□□□ 0.86
PTCHD3P2-201ENST00000424937 EMC8O43402 210 aa20.43■□□□□ 0.86
PTCHD3P2-201ENST00000424937 PTGDSP41222 190 aa20.43■□□□□ 0.86
PTCHD3P2-201ENST00000424937 MAN2A2P49641 1150 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms