RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 ZMAT1Q5H9K5 638 aa11.18□□□□□ -0.62
PTPRN-204ENST00000423636 SYT6Q5T7P8 510 aaPredicted RBP11.18□□□□□ -0.62
PTPRN-204ENST00000423636 TYW3Q6IPR3 259 aaKnown RBP11.18□□□□□ -0.62
PTPRN-204ENST00000423636 KIF18BQ86Y91 864 aa11.18□□□□□ -0.62
PTPRN-204ENST00000423636 NRMQ8IXM6 262 aa11.18□□□□□ -0.62
PTPRN-204ENST00000423636 OR4F15Q8NGB8 312 aa11.18□□□□□ -0.62
PTPRN-204ENST00000423636 OR51L1Q8NGJ5 315 aa11.18□□□□□ -0.62
PTPRN-204ENST00000423636 SLC6A18Q96N87 628 aa11.18□□□□□ -0.62
PTPRN-204ENST00000423636 GABARAPL3Q9BY60 117 aa11.18□□□□□ -0.62
PTPRN-204ENST00000423636 LRRN3Q9H3W5 708 aa11.18□□□□□ -0.62
PTPRN-204ENST00000423636 USP36Q9P275 1121 aaKnown RBP11.18□□□□□ -0.62
PTPRN-204ENST00000423636 ATG2AQ2TAZ0 1938 aa11.18□□□□□ -0.62
PTPRN-204ENST00000423636 CXorf51AA0A1B0GTR3 108 aa11.18□□□□□ -0.62
PTPRN-204ENST00000423636 A0A1B0GVC2 190 aa11.18□□□□□ -0.62
PTPRN-204ENST00000423636 A6NIN4 97 aa11.18□□□□□ -0.62
PTPRN-204ENST00000423636 C17orf51A8MQB3 221 aa11.18□□□□□ -0.62
PTPRN-204ENST00000423636 CLDN25C9JDP6 229 aa11.18□□□□□ -0.62
PTPRN-204ENST00000423636 ARHGAP33O14559 1287 aa11.18□□□□□ -0.62
PTPRN-204ENST00000423636 FGF17O60258 216 aa11.18□□□□□ -0.62
PTPRN-204ENST00000423636 CT62P0C5K7 136 aa11.18□□□□□ -0.62
PTPRN-204ENST00000423636 F3P13726 295 aa11.18□□□□□ -0.62
PTPRN-204ENST00000423636 PORP16435 677 aaPredicted RBP11.18□□□□□ -0.62
PTPRN-204ENST00000423636 PGDP52209 483 aa11.18□□□□□ -0.62
PTPRN-204ENST00000423636 RGS8P57771 180 aaPredicted RBP11.18□□□□□ -0.62
PTPRN-204ENST00000423636 NKAIN2Q5VXU1 208 aa11.18□□□□□ -0.62
PTPRN-204ENST00000423636 ZNF770Q6IQ21 691 aaPredicted RBP11.18□□□□□ -0.62
PTPRN-204ENST00000423636 FIGLAQ6QHK4 219 aa11.18□□□□□ -0.62
PTPRN-204ENST00000423636 TBC1D19Q8N5T2 526 aa11.18□□□□□ -0.62
PTPRN-204ENST00000423636 OR8D4Q8NGM9 314 aa11.18□□□□□ -0.62
PTPRN-204ENST00000423636 GPR151Q8TDV0 419 aa11.18□□□□□ -0.62
PTPRN-204ENST00000423636 SLC37A2Q8TED4 501 aa11.18□□□□□ -0.62
PTPRN-204ENST00000423636 FBLIM1Q8WUP2 373 aa11.18□□□□□ -0.62
PTPRN-204ENST00000423636 ELSPBP1Q96BH3 223 aa11.18□□□□□ -0.62
PTPRN-204ENST00000423636 MAN2C1Q9NTJ4 1040 aa11.18□□□□□ -0.62
PTPRN-204ENST00000423636 CLN6Q9NWW5 311 aa11.18□□□□□ -0.62
PTPRN-204ENST00000423636 FTSJ1Q9UET6 329 aa11.18□□□□□ -0.62
PTPRN-204ENST00000423636 NAALAD2Q9Y3Q0 740 aa11.18□□□□□ -0.62
PTPRN-204ENST00000423636 A0A0A6YYC8 382 aaPredicted RBP11.17□□□□□ -0.62
PTPRN-204ENST00000423636 GXYLT2A0PJZ3 443 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 FAM170BA6NMN3 283 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 I3L1I5 382 aaPredicted RBP11.17□□□□□ -0.62
PTPRN-204ENST00000423636 CNOT3O75175 753 aaKnown RBP11.17□□□□□ -0.62
PTPRN-204ENST00000423636 FHP07954 510 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 NR2F6P10588 404 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 MPIP34949 423 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 RGS6P49758 472 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 ARHGAP19Q14CB8 494 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 DESI1Q6ICB0 168 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 ASPGQ86U10 573 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 SLC22A16Q86VW1 577 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 OR9Q1Q8NGQ5 310 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 DYNC2LI1Q8TCX1 351 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 WDR92Q96MX6 357 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 PTCHD1Q96NR3 888 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 QRFPRQ96P65 431 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 SLC38A1Q9H2H9 487 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 CCDC86Q9H6F5 360 aaKnown RBP11.17□□□□□ -0.62
PTPRN-204ENST00000423636 GIMAP4Q9NUV9 329 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 NLGN3Q9NZ94 848 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 COLEC10Q9Y6Z7 277 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.17□□□□□ -0.62
PTPRN-204ENST00000423636 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.17□□□□□ -0.62
PTPRN-204ENST00000423636 DSCR3O14972 297 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 GPX5O75715 221 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 MRPL3P09001 348 aaKnown RBP11.17□□□□□ -0.62
PTPRN-204ENST00000423636 CCNYL3P0C7X3 344 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 CTSEP14091 401 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 ATP6V1E1P36543 226 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 NKX2-5P52952 324 aaPredicted RBP11.17□□□□□ -0.62
PTPRN-204ENST00000423636 IL18R1Q13478 541 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 TAB1Q15750 504 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 DGUOKQ16854 277 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 RGS21Q2M5E4 152 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 SLC48A1Q6P1K1 146 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 IKBIPQ70UQ0 350 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 KRT73Q86Y46 540 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 NRROSQ86YC3 692 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 TMEM151BQ8IW70 566 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 SVOPQ8N4V2 548 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 CYB561A3Q8NBI2 242 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 APOBEC4Q8WW27 367 aaKnown RBP11.17□□□□□ -0.62
PTPRN-204ENST00000423636 MYDGFQ969H8 173 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 SLC38A4Q969I6 547 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 OR2A14Q96R47 310 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 PITX2Q99697 317 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 POLR2J2Q9GZM3 115 aaKnown RBP11.17□□□□□ -0.62
PTPRN-204ENST00000423636 S1PR5Q9H228 398 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 ABCB9Q9NP78 766 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 ACTR10Q9NZ32 417 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 SDK2Q58EX2 2172 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 PLD2O14939 933 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 NCR1O76036 304 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 SOX30O94993 753 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 ST6GAL1P15907 406 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 GABRB1P18505 474 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 ZNF91Q05481 1191 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 TUBA3CQ13748 450 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 KCNAB1Q14722 419 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 SSX1Q16384 188 aa11.17□□□□□ -0.62
PTPRN-204ENST00000423636 GATAD2AQ86YP4 633 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms