RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 SOX18P35713 384 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 CASP3P42574 277 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 MAN2A2P49641 1150 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 SMSP52788 366 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 CORO7P57737 925 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 EMX2Q04743 252 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 BST1Q10588 318 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 PDE7AQ13946 482 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 EFR3AQ14156 821 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 PRSS53Q2L4Q9 553 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 SMU1Q2TAY7 513 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 VPS26BQ4G0F5 336 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 CPTPQ5TA50 214 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 AGBL2Q5U5Z8 902 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 SLC30A6Q6NXT4 461 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 RPTNQ6XPR3 784 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 LARP4Q71RC2 724 aaKnown RBP eCLIP10.04□□□□□ -0.8
USP49-204ENST00000423567 ZNF551Q7Z340 670 aaPredicted RBP10.04□□□□□ -0.8
USP49-204ENST00000423567 SZRD1Q7Z422 152 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 OR2L13Q8N349 312 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 CEP70Q8NHQ1 597 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 RAB3IL1Q8TBN0 382 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 FAM57AQ8TBR7 257 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 TMBIM1Q969X1 311 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 CIDECQ96AQ7 238 aaPredicted RBP10.04□□□□□ -0.8
USP49-204ENST00000423567 ELP4Q96EB1 424 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 DTNBP1Q96EV8 351 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 PPP1R36Q96LQ0 422 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 SORT1Q99523 831 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 OSBPL11Q9BXB4 747 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 ANGPTL4Q9BY76 406 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 ZNF395Q9H8N7 513 aaPredicted RBP10.04□□□□□ -0.8
USP49-204ENST00000423567 Q9N2J8 555 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 THAP1Q9NVV9 213 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 QPCTLQ9NXS2 382 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 ATP6V1HQ9UI12 483 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 SVILO95425 2214 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 LRRK2Q5S007 2527 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 FLNCQ14315 2725 aa10.04□□□□□ -0.8
USP49-204ENST00000423567 A1L4Q6 167 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 OR14I1A6ND48 311 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 PRAMEF25A6NGN4 478 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 NPIPA2E9PIF3 369 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 NPIPA3F8WFD2 350 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 UPK1AO00322 258 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 LCE2BO14633 110 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 BCKDKO14874 412 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 HCN1O60741 890 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 ZG16O60844 167 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 UGT2B11O75310 529 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 TRIM3O75382 744 aaPredicted RBP10.03□□□□□ -0.8
USP49-204ENST00000423567 TRAPPC6AO75865 159 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 IGHG3P01860 377 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 RNF224P0DH78 156 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 CT45A8P0DMV1 189 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 CT45A9P0DMV2 189 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 ELAVL4P26378 380 aaKnown RBP10.03□□□□□ -0.8
USP49-204ENST00000423567 GCKP35557 465 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 PSMD4P55036 377 aaKnown RBP10.03□□□□□ -0.8
USP49-204ENST00000423567 WDR4P57081 412 aaKnown RBP10.03□□□□□ -0.8
USP49-204ENST00000423567 PRR5P85299 388 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 SNTA1Q13424 505 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 PTGR1Q14914 329 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 DECR1Q16698 335 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 CYP27C1Q4G0S4 372 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 ZNF385BQ569K4 471 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 CT45A2Q5DJT8 189 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 CES4AQ5XG92 561 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 BICRALQ6AI39 1079 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 TMEM81Q6P7N7 255 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 TRILQ7L0X0 811 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 HDXQ7Z353 690 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 CD163Q86VB7 1156 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 HGDQ93099 445 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 SARAFQ96BY9 339 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 SLC35A4Q96G79 324 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 CCDC120Q96HB5 630 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 TMEM41AQ96HV5 264 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 ADOQ96SZ5 270 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 NUF2Q9BZD4 464 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 C20orf27Q9GZN8 174 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 TP63Q9H3D4 680 aaPredicted RBP10.03□□□□□ -0.8
USP49-204ENST00000423567 ZNF703Q9H7S9 590 aaPredicted RBP10.03□□□□□ -0.8
USP49-204ENST00000423567 MANSC1Q9H8J5 431 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 AKTIPQ9H8T0 292 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 PROK2Q9HC23 129 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 ASIC5Q9NY37 505 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 PLEKHB1Q9UF11 243 aaPredicted RBP10.03□□□□□ -0.8
USP49-204ENST00000423567 HAO1Q9UJM8 370 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 ACAD8Q9UKU7 415 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 MEMO1Q9Y316 297 aa10.03□□□□□ -0.8
USP49-204ENST00000423567 FLNBO75369 2602 aaKnown RBP10.02□□□□□ -0.81
USP49-204ENST00000423567 TRGV5A0A0B4J1U4 118 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 A0A1W2PRB8 838 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 LRRC3CA6NJW4 275 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 TRPC5OSA6NMA1 111 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 FIGNL2A6NMB9 653 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 E9PLN8 166 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 SLCO1B7G3V0H7 640 aa10.02□□□□□ -0.81
USP49-204ENST00000423567 AQP7O14520 342 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms