RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 SLC35A4Q96G79 324 aa13.45□□□□□ -0.26
RPS28-201ENST00000417088 DACH2Q96NX9 599 aa13.45□□□□□ -0.26
RPS28-201ENST00000417088 CLCF1Q9UBD9 225 aa13.45□□□□□ -0.26
RPS28-201ENST00000417088 VPS29Q9UBQ0 182 aa13.45□□□□□ -0.26
RPS28-201ENST00000417088 FBXL2Q9UKC9 423 aa13.45□□□□□ -0.26
RPS28-201ENST00000417088 ABCA2Q9BZC7 2435 aa13.44□□□□□ -0.26
RPS28-201ENST00000417088 SH3D21A4FU49 640 aa13.44□□□□□ -0.26
RPS28-201ENST00000417088 TRIM49D1C9J1S8 452 aa13.44□□□□□ -0.26
RPS28-201ENST00000417088 MANBAO00462 879 aa13.44□□□□□ -0.26
RPS28-201ENST00000417088 TSPAN2O60636 221 aa13.44□□□□□ -0.26
RPS28-201ENST00000417088 ABCB7O75027 752 aa13.44□□□□□ -0.26
RPS28-201ENST00000417088 BCAS2O75934 225 aaPredicted RBP13.44□□□□□ -0.26
RPS28-201ENST00000417088 ESRRBO95718 433 aa13.44□□□□□ -0.26
RPS28-201ENST00000417088 CT45A8P0DMV1 189 aa13.44□□□□□ -0.26
RPS28-201ENST00000417088 CT45A9P0DMV2 189 aa13.44□□□□□ -0.26
RPS28-201ENST00000417088 HOXC12P31275 282 aa13.44□□□□□ -0.26
RPS28-201ENST00000417088 LHX2P50458 406 aa13.44□□□□□ -0.26
RPS28-201ENST00000417088 CORO7P57737 925 aa13.44□□□□□ -0.26
RPS28-201ENST00000417088 CLCQ05315 142 aa13.44□□□□□ -0.26
RPS28-201ENST00000417088 CKAP4Q07065 602 aaKnown RBP13.44□□□□□ -0.26
RPS28-201ENST00000417088 POU4F3Q15319 338 aa13.44□□□□□ -0.26
RPS28-201ENST00000417088 CT45A2Q5DJT8 189 aa13.44□□□□□ -0.26
RPS28-201ENST00000417088 TAOK1Q7L7X3 1001 aa13.44□□□□□ -0.26
RPS28-201ENST00000417088 MED12LQ86YW9 2145 aa13.44□□□□□ -0.26
RPS28-201ENST00000417088 GCNT2Q8N0V5 402 aa13.44□□□□□ -0.26
RPS28-201ENST00000417088 CDYL2Q8N8U2 506 aa13.44□□□□□ -0.26
RPS28-201ENST00000417088 KAT2AQ92830 837 aa13.44□□□□□ -0.26
RPS28-201ENST00000417088 VSTM2LQ96N03 204 aa13.44□□□□□ -0.26
RPS28-201ENST00000417088 BTBD9Q96Q07 612 aa13.44□□□□□ -0.26
RPS28-201ENST00000417088 ADOQ96SZ5 270 aa13.44□□□□□ -0.26
RPS28-201ENST00000417088 PFDN4Q9NQP4 134 aa13.44□□□□□ -0.26
RPS28-201ENST00000417088 MCM8Q9UJA3 840 aa13.44□□□□□ -0.26
RPS28-201ENST00000417088 ZNF180Q9UJW8 692 aa13.44□□□□□ -0.26
RPS28-201ENST00000417088 DLGAP4Q9Y2H0 992 aa13.44□□□□□ -0.26
RPS28-201ENST00000417088 WIF1Q9Y5W5 379 aa13.44□□□□□ -0.26
RPS28-201ENST00000417088 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.43□□□□□ -0.26
RPS28-201ENST00000417088 A8MXE2 369 aa13.43□□□□□ -0.26
RPS28-201ENST00000417088 B4DXG7 233 aa13.43□□□□□ -0.26
RPS28-201ENST00000417088 POC1B-GALNT4F8VUJ3 575 aa13.43□□□□□ -0.26
RPS28-201ENST00000417088 PLOD2O00469 737 aa13.43□□□□□ -0.26
RPS28-201ENST00000417088 ZIC3O60481 467 aa13.43□□□□□ -0.26
RPS28-201ENST00000417088 TNFSF13O75888 250 aa13.43□□□□□ -0.26
RPS28-201ENST00000417088 IL3P08700 152 aa13.43□□□□□ -0.26
RPS28-201ENST00000417088 CTAGE8P0CG41 777 aa13.43□□□□□ -0.26
RPS28-201ENST00000417088 HSD3B1P14060 373 aa13.43□□□□□ -0.26
RPS28-201ENST00000417088 DRD2P14416 443 aa13.43□□□□□ -0.26
RPS28-201ENST00000417088 ZNF708P17019 499 aa13.43□□□□□ -0.26
RPS28-201ENST00000417088 CD53P19397 219 aa13.43□□□□□ -0.26
RPS28-201ENST00000417088 CHMP24386 653 aa13.43□□□□□ -0.26
RPS28-201ENST00000417088 HSD3B2P26439 372 aa13.43□□□□□ -0.26
RPS28-201ENST00000417088 CPA2P48052 419 aa13.43□□□□□ -0.26
RPS28-201ENST00000417088 CLDN18P56856 261 aa13.43□□□□□ -0.26
RPS28-201ENST00000417088 RAE1P78406 368 aaKnown RBP13.43□□□□□ -0.26
RPS28-201ENST00000417088 GAB1Q13480 694 aa13.43□□□□□ -0.26
RPS28-201ENST00000417088 UNC50Q53HI1 259 aa13.43□□□□□ -0.26
RPS28-201ENST00000417088 OR5M10Q6IEU7 315 aa13.43□□□□□ -0.26
RPS28-201ENST00000417088 AAGABQ6PD74 315 aa13.43□□□□□ -0.26
RPS28-201ENST00000417088 NPSR1Q6W5P4 371 aa13.43□□□□□ -0.26
RPS28-201ENST00000417088 CTAGE4Q8IX94 777 aa13.43□□□□□ -0.26
RPS28-201ENST00000417088 OR9A2Q8NGT5 310 aa13.43□□□□□ -0.26
RPS28-201ENST00000417088 UHMK1Q8TAS1 419 aaKnown RBP13.43□□□□□ -0.26
RPS28-201ENST00000417088 RNF138Q8WVD3 245 aa13.43□□□□□ -0.26
RPS28-201ENST00000417088 ERP27Q96DN0 273 aa13.43□□□□□ -0.26
RPS28-201ENST00000417088 SFXN2Q96NB2 322 aa13.43□□□□□ -0.26
RPS28-201ENST00000417088 ACBD3Q9H3P7 528 aa13.43□□□□□ -0.26
RPS28-201ENST00000417088 PIGMQ9H3S5 423 aa13.43□□□□□ -0.26
RPS28-201ENST00000417088 DMGDHQ9UI17 866 aaKnown RBP13.43□□□□□ -0.26
RPS28-201ENST00000417088 MRPS18CQ9Y3D5 142 aaKnown RBP13.43□□□□□ -0.26
RPS28-201ENST00000417088 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.43□□□□□ -0.26
RPS28-201ENST00000417088 C17orf51A8MQB3 221 aa13.42□□□□□ -0.26
RPS28-201ENST00000417088 HCRTR2O43614 444 aa13.42□□□□□ -0.26
RPS28-201ENST00000417088 PCDH7O60245 1069 aa13.42□□□□□ -0.26
RPS28-201ENST00000417088 SUPT7LO94864 414 aa13.42□□□□□ -0.26
RPS28-201ENST00000417088 TGM6O95932 706 aa13.42□□□□□ -0.26
RPS28-201ENST00000417088 KRT6AP02538 564 aa13.42□□□□□ -0.26
RPS28-201ENST00000417088 KRT6BP04259 564 aa13.42□□□□□ -0.26
RPS28-201ENST00000417088 GRK2P25098 689 aa13.42□□□□□ -0.26
RPS28-201ENST00000417088 KRT6CP48668 564 aa13.42□□□□□ -0.26
RPS28-201ENST00000417088 HTR6P50406 440 aa13.42□□□□□ -0.26
RPS28-201ENST00000417088 GAS1P54826 345 aa13.42□□□□□ -0.26
RPS28-201ENST00000417088 CSTF3Q12996 717 aaKnown RBP13.42□□□□□ -0.26
RPS28-201ENST00000417088 EFR3AQ14156 821 aa13.42□□□□□ -0.26
RPS28-201ENST00000417088 RASA2Q15283 850 aa13.42□□□□□ -0.26
RPS28-201ENST00000417088 ZNF678Q5SXM1 525 aa13.42□□□□□ -0.26
RPS28-201ENST00000417088 TEX35Q5T0J7 233 aa13.42□□□□□ -0.26
RPS28-201ENST00000417088 SCIMPQ6UWF3 145 aa13.42□□□□□ -0.26
RPS28-201ENST00000417088 LARP4Q71RC2 724 aaKnown RBP eCLIP13.42□□□□□ -0.266e-9■■□□□ 13
RPS28-201ENST00000417088 KRTAP1-3Q8IUG1 177 aa13.42□□□□□ -0.26
RPS28-201ENST00000417088 GRAMD2AQ8IUY3 354 aa13.42□□□□□ -0.26
RPS28-201ENST00000417088 SMPDL3BQ92485 455 aa13.42□□□□□ -0.26
RPS28-201ENST00000417088 EXOSC8Q96B26 276 aaKnown RBP13.42□□□□□ -0.26
RPS28-201ENST00000417088 ACPTQ9BZG2 426 aa13.42□□□□□ -0.26
RPS28-201ENST00000417088 TSPYL1Q9H0U9 437 aa13.42□□□□□ -0.26
RPS28-201ENST00000417088 FOLH1BQ9HBA9 442 aa13.42□□□□□ -0.26
RPS28-201ENST00000417088 NEUROD4Q9HD90 331 aa13.42□□□□□ -0.26
RPS28-201ENST00000417088 PACSIN3Q9UKS6 424 aa13.42□□□□□ -0.26
RPS28-201ENST00000417088 A0A1W2PNV4 684 aa13.41□□□□□ -0.26
RPS28-201ENST00000417088 CASKO14936 926 aa13.41□□□□□ -0.26
RPS28-201ENST00000417088 PLOD3O60568 738 aa13.41□□□□□ -0.26
RPS28-201ENST00000417088 ULK1O75385 1050 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms