RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 EXO5Q9H790 373 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 NEUROD4Q9HD90 331 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 QPCTLQ9NXS2 382 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 TUBA8Q9NY65 449 aaPredicted RBP13.52□□□□□ -0.25
CHD1-202ENST00000414220 KLRF1Q9NZS2 232 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 CNOT11Q9UKZ1 510 aaKnown RBP13.52□□□□□ -0.25
CHD1-202ENST00000414220 SNX8Q9Y5X2 465 aa13.52□□□□□ -0.25
CHD1-202ENST00000414220 FAM166BA8MTA8 275 aa13.51□□□□□ -0.25
CHD1-202ENST00000414220 SLC19A2O60779 497 aa13.51□□□□□ -0.25
CHD1-202ENST00000414220 CT45A8P0DMV1 189 aa13.51□□□□□ -0.25
CHD1-202ENST00000414220 CT45A9P0DMV2 189 aa13.51□□□□□ -0.25
CHD1-202ENST00000414220 LAMP1P11279 417 aa13.51□□□□□ -0.25
CHD1-202ENST00000414220 ESRRAP11474 423 aaPredicted RBP13.51□□□□□ -0.25
CHD1-202ENST00000414220 ELAVL4P26378 380 aaKnown RBP13.51□□□□□ -0.25
CHD1-202ENST00000414220 PTGS2P35354 604 aa13.51□□□□□ -0.25
CHD1-202ENST00000414220 TP53BP2Q13625 1128 aa13.51□□□□□ -0.25
CHD1-202ENST00000414220 CT45A2Q5DJT8 189 aa13.51□□□□□ -0.25
CHD1-202ENST00000414220 TMEM81Q6P7N7 255 aa13.51□□□□□ -0.25
CHD1-202ENST00000414220 ACAD11Q709F0 780 aa13.51□□□□□ -0.25
CHD1-202ENST00000414220 SPPL2CQ8IUH8 684 aa13.51□□□□□ -0.25
CHD1-202ENST00000414220 SIMC1Q8NDZ2 872 aa13.51□□□□□ -0.25
CHD1-202ENST00000414220 OR56A1Q8NGH5 318 aa13.51□□□□□ -0.25
CHD1-202ENST00000414220 SSC4DQ8WTU2 575 aa13.51□□□□□ -0.25
CHD1-202ENST00000414220 TMBIM1Q969X1 311 aa13.51□□□□□ -0.25
CHD1-202ENST00000414220 SLC35A4Q96G79 324 aa13.51□□□□□ -0.25
CHD1-202ENST00000414220 C7orf26Q96N11 449 aa13.51□□□□□ -0.25
CHD1-202ENST00000414220 MS4A4EQ96PG1 132 aa13.51□□□□□ -0.25
CHD1-202ENST00000414220 LMF2Q9BU23 707 aaKnown RBP13.51□□□□□ -0.25
CHD1-202ENST00000414220 ANGPTL4Q9BY76 406 aa13.51□□□□□ -0.25
CHD1-202ENST00000414220 DEFB127Q9H1M4 99 aa13.51□□□□□ -0.25
CHD1-202ENST00000414220 HHATLQ9HCP6 504 aa13.51□□□□□ -0.25
CHD1-202ENST00000414220 CBLCQ9ULV8 474 aa13.51□□□□□ -0.25
CHD1-202ENST00000414220 CROCCQ5TZA2 2017 aa13.51□□□□□ -0.25
CHD1-202ENST00000414220 SHANK1Q9Y566 2161 aa13.5□□□□□ -0.25
CHD1-202ENST00000414220 PINLYPA6NC86 204 aa13.5□□□□□ -0.25
CHD1-202ENST00000414220 SDHDO14521 159 aa13.5□□□□□ -0.25
CHD1-202ENST00000414220 LRRTM2O43300 516 aa13.5□□□□□ -0.25
CHD1-202ENST00000414220 GLSO94925 669 aaPredicted RBP13.5□□□□□ -0.25
CHD1-202ENST00000414220 ALOX5P09917 674 aa13.5□□□□□ -0.25
CHD1-202ENST00000414220 GABRA3P34903 492 aa13.5□□□□□ -0.25
CHD1-202ENST00000414220 GCKP35557 465 aa13.5□□□□□ -0.25
CHD1-202ENST00000414220 SOX18P35713 384 aa13.5□□□□□ -0.25
CHD1-202ENST00000414220 CASP3P42574 277 aa13.5□□□□□ -0.25
CHD1-202ENST00000414220 KIR3DL1P43629 444 aa13.5□□□□□ -0.25
CHD1-202ENST00000414220 DIO3P55073 304 aa13.5□□□□□ -0.25
CHD1-202ENST00000414220 CORO7P57737 925 aa13.5□□□□□ -0.25
CHD1-202ENST00000414220 LRRC74AQ0VAA2 488 aa13.5□□□□□ -0.25
CHD1-202ENST00000414220 ESPL1Q14674 2120 aa13.5□□□□□ -0.25
CHD1-202ENST00000414220 RNFT1Q5M7Z0 435 aa13.5□□□□□ -0.25
CHD1-202ENST00000414220 CAMKMTQ7Z624 323 aa13.5□□□□□ -0.25
CHD1-202ENST00000414220 RIMKLAQ8IXN7 391 aa13.5□□□□□ -0.25
CHD1-202ENST00000414220 ARFGAP2Q8N6H7 521 aa13.5□□□□□ -0.25
CHD1-202ENST00000414220 TMEM251Q8N6I4 163 aa13.5□□□□□ -0.25
CHD1-202ENST00000414220 KRTCAP2Q8N6L1 136 aa13.5□□□□□ -0.25
CHD1-202ENST00000414220 OR52N2Q8NGI0 321 aa13.5□□□□□ -0.25
CHD1-202ENST00000414220 GPR151Q8TDV0 419 aa13.5□□□□□ -0.25
CHD1-202ENST00000414220 SLC9A6Q92581 669 aa13.5□□□□□ -0.25
CHD1-202ENST00000414220 RELTQ969Z4 430 aa13.5□□□□□ -0.25
CHD1-202ENST00000414220 CHMP6Q96FZ7 201 aa13.5□□□□□ -0.25
CHD1-202ENST00000414220 TMEM41AQ96HV5 264 aa13.5□□□□□ -0.25
CHD1-202ENST00000414220 RILPQ96NA2 401 aa13.5□□□□□ -0.25
CHD1-202ENST00000414220 ADOQ96SZ5 270 aa13.5□□□□□ -0.25
CHD1-202ENST00000414220 OSBPL11Q9BXB4 747 aa13.5□□□□□ -0.25
CHD1-202ENST00000414220 EQTNQ9NQ60 294 aa13.5□□□□□ -0.25
CHD1-202ENST00000414220 SDHAF3Q9NRP4 125 aa13.5□□□□□ -0.25
CHD1-202ENST00000414220 ZCCHC3Q9NUD5 404 aaKnown RBP13.5□□□□□ -0.25
CHD1-202ENST00000414220 FAF1Q9UNN5 650 aaPredicted RBP13.5□□□□□ -0.25
CHD1-202ENST00000414220 PCDHGB3Q9Y5G1 929 aa13.5□□□□□ -0.25
CHD1-202ENST00000414220 RP1L1Q8IWN7 2480 aaPredicted RBP13.5□□□□□ -0.25
CHD1-202ENST00000414220 GOLGA8QA0A0J9YX86 632 aa13.49□□□□□ -0.25
CHD1-202ENST00000414220 GOLGA8OA6NCC3 632 aa13.49□□□□□ -0.25
CHD1-202ENST00000414220 PRAMEF25A6NGN4 478 aa13.49□□□□□ -0.25
CHD1-202ENST00000414220 GOLGA8NF8WBI6 632 aa13.49□□□□□ -0.25
CHD1-202ENST00000414220 DIAPH2O60879 1101 aa13.49□□□□□ -0.25
CHD1-202ENST00000414220 UGT2B11O75310 529 aa13.49□□□□□ -0.25
CHD1-202ENST00000414220 PDE9AO76083 593 aa13.49□□□□□ -0.25
CHD1-202ENST00000414220 TGDSO95455 350 aa13.49□□□□□ -0.25
CHD1-202ENST00000414220 IDO1P14902 403 aa13.49□□□□□ -0.25
CHD1-202ENST00000414220 GDF1P27539 372 aa13.49□□□□□ -0.25
CHD1-202ENST00000414220 EPHA3P29320 983 aa13.49□□□□□ -0.25
CHD1-202ENST00000414220 S100A3P33764 101 aa13.49□□□□□ -0.25
CHD1-202ENST00000414220 CA7P43166 264 aa13.49□□□□□ -0.25
CHD1-202ENST00000414220 MAGEA5P43359 124 aa13.49□□□□□ -0.25
CHD1-202ENST00000414220 CCT3P49368 545 aaKnown RBP13.49□□□□□ -0.25
CHD1-202ENST00000414220 MAN2A2P49641 1150 aa13.49□□□□□ -0.25
CHD1-202ENST00000414220 CDK9P50750 372 aaKnown RBP13.49□□□□□ -0.25
CHD1-202ENST00000414220 PSG6Q00889 435 aa13.49□□□□□ -0.25
CHD1-202ENST00000414220 FOXO1Q12778 655 aa13.49□□□□□ -0.25
CHD1-202ENST00000414220 GAB1Q13480 694 aa13.49□□□□□ -0.25
CHD1-202ENST00000414220 TOMM20Q15388 145 aa13.49□□□□□ -0.25
CHD1-202ENST00000414220 CMPK2Q5EBM0 449 aa13.49□□□□□ -0.25
CHD1-202ENST00000414220 FJX1Q86VR8 437 aa13.49□□□□□ -0.25
CHD1-202ENST00000414220 GLB1L3Q8NCI6 653 aaPredicted RBP13.49□□□□□ -0.25
CHD1-202ENST00000414220 OR8J2Q8NGG1 315 aa13.49□□□□□ -0.25
CHD1-202ENST00000414220 OR1J4Q8NGS1 313 aa13.49□□□□□ -0.25
CHD1-202ENST00000414220 ACTRT2Q8TDY3 377 aa13.49□□□□□ -0.25
CHD1-202ENST00000414220 HGDQ93099 445 aa13.49□□□□□ -0.25
CHD1-202ENST00000414220 SARAFQ96BY9 339 aa13.49□□□□□ -0.25
CHD1-202ENST00000414220 MAGEB18Q96M61 343 aa13.49□□□□□ -0.25
CHD1-202ENST00000414220 WDR55Q9H6Y2 383 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms