RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 SH3D21A4FU49 640 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 DISC1C4P0D8 188 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 H3BSH0 61 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 DLGAP1O14490 977 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 YKT6O15498 198 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 NDUFB2O95178 105 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 HMGN2P05204 90 aaKnown RBP8.59□□□□□ -1.03
PBRM1-208ENST00000410007 ZNF28P17035 718 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 ELK4P28324 431 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 PRDX3P30048 256 aaKnown RBP8.59□□□□□ -1.03
PBRM1-208ENST00000410007 MMP12P39900 470 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 HERV-K104P61576 105 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 SHHQ15465 462 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 GXYLT1Q4G148 440 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 SPIN3Q5JUX0 258 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 LRFN4Q6PJG9 635 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 DGLUCYQ7Z3D6 616 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 UEVLDQ8IX04 471 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 TDHQ8IZJ6 230 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 MYLIPQ8WY64 445 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 NINJ1Q92982 152 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 C12orf43Q96C57 262 aaKnown RBP8.59□□□□□ -1.03
PBRM1-208ENST00000410007 TCTN2Q96GX1 697 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 SORT1Q99523 831 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 FAM118AQ9NWS6 357 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 MED11Q9P086 117 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 RIMS3Q9UJD0 308 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 ADAM29Q9UKF5 820 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 SLC35A3Q9Y2D2 325 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 NRAPQ86VF7 1730 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 ANKRD28O15084 1053 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 GPR39O43194 453 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 HOXC11O43248 304 aaPredicted RBP8.59□□□□□ -1.03
PBRM1-208ENST00000410007 SLC19A2O60779 497 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 CTXN1P60606 82 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 UBE2NP61088 152 aaKnown RBP8.59□□□□□ -1.03
PBRM1-208ENST00000410007 SPHARQ15513 63 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 CDKN3Q16667 212 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 PAGE3Q5JUK9 113 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 LRRN1Q6UXK5 716 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 SERPINA11Q86U17 422 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 LHFPL3Q86UP9 236 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 AGBL5Q8NDL9 886 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 OR52E2Q8NGJ4 325 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 OR8K3Q8NH51 312 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 SFXN5Q8TD22 340 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 ELP5Q8TE02 316 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 CIDECQ96AQ7 238 aaPredicted RBP8.59□□□□□ -1.03
PBRM1-208ENST00000410007 SFXN2Q96NB2 322 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 URM1Q9BTM9 101 aaKnown RBP8.59□□□□□ -1.03
PBRM1-208ENST00000410007 FAM53CQ9NYF3 392 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 IL37Q9NZH6 218 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 CCDC59Q9P031 241 aaKnown RBP8.59□□□□□ -1.03
PBRM1-208ENST00000410007 TBX21Q9UL17 535 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 OSMP13725 252 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 HMGA1P17096 107 aaKnown RBP8.59□□□□□ -1.03
PBRM1-208ENST00000410007 PVALBP20472 110 aaPredicted RBP8.59□□□□□ -1.03
PBRM1-208ENST00000410007 CTHP32929 405 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 SEMA3BQ13214 749 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 TSPYL5Q86VY4 417 aaPredicted RBP8.59□□□□□ -1.03
PBRM1-208ENST00000410007 PGBD5Q8N414 524 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 MS4A15Q8N5U1 240 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 NAXEQ8NCW5 288 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 PMM1Q92871 262 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 BORCS8Q96FH0 119 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 FAM46AQ96IP4 442 aaKnown RBP8.59□□□□□ -1.03
PBRM1-208ENST00000410007 MGLLQ99685 303 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 MMP27Q9H306 513 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 EPHX3Q9H6B9 360 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 METTL8Q9H825 291 aaKnown RBP8.59□□□□□ -1.03
PBRM1-208ENST00000410007 EIF3KQ9UBQ5 218 aaKnown RBP8.59□□□□□ -1.03
PBRM1-208ENST00000410007 ERVK-19Q9WJR5 959 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 PCDHGA7Q9Y5G6 932 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 CACNA1SQ13698 1873 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 A0A1B0GTW7 788 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 TCRBV5S1A1TA0A578 114 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 GPR75O95800 540 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 MT-ND2P03891 347 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 GPX3P22352 226 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 MAOBP27338 520 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 AFF3P51826 1226 aaKnown RBP8.59□□□□□ -1.03
PBRM1-208ENST00000410007 TMBIM6P55061 237 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 ZNF829Q3KNS6 432 aaPredicted RBP8.59□□□□□ -1.03
PBRM1-208ENST00000410007 HMBOX1Q6NT76 420 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 CLEC1AQ8NC01 280 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 NETO1Q8TDF5 533 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 NANOS1Q8WY41 292 aaKnown RBP8.59□□□□□ -1.03
PBRM1-208ENST00000410007 PRR11Q96HE9 360 aaPredicted RBP8.59□□□□□ -1.03
PBRM1-208ENST00000410007 PITX2Q99697 317 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 FUZQ9BT04 418 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 CITO14578 2027 aa8.59□□□□□ -1.03
PBRM1-208ENST00000410007 MYH4Q9Y623 1939 aa8.59□□□□□ -1.04
PBRM1-208ENST00000410007 TEX13DA0A0J9YY54 714 aaPredicted RBP8.58□□□□□ -1.04
PBRM1-208ENST00000410007 LRRN3E7EW58 273 aa8.58□□□□□ -1.04
PBRM1-208ENST00000410007 MMP2P08253 660 aa8.58□□□□□ -1.04
PBRM1-208ENST00000410007 CKMT1AP12532 417 aa8.58□□□□□ -1.04
PBRM1-208ENST00000410007 BMP2P12643 396 aa8.58□□□□□ -1.04
PBRM1-208ENST00000410007 PVRP15151 417 aa8.58□□□□□ -1.04
PBRM1-208ENST00000410007 VAMP1P23763 118 aa8.58□□□□□ -1.04
PBRM1-208ENST00000410007 IRS1P35568 1242 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms