RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 ZNF691Q5VV52 312 aa13.15□□□□□ -0.3
LIMS2-206ENST00000409754 TCTN3Q6NUS6 607 aa13.15□□□□□ -0.3
LIMS2-206ENST00000409754 OLIG3Q7RTU3 272 aa13.15□□□□□ -0.3
LIMS2-206ENST00000409754 GALNT5Q7Z7M9 940 aa13.15□□□□□ -0.3
LIMS2-206ENST00000409754 CDRT4Q8N9R6 151 aa13.15□□□□□ -0.3
LIMS2-206ENST00000409754 OR4C6Q8NH72 309 aa13.15□□□□□ -0.3
LIMS2-206ENST00000409754 CCDC74AQ96AQ1 378 aa13.15□□□□□ -0.3
LIMS2-206ENST00000409754 MMABQ96EY8 250 aaPredicted RBP13.15□□□□□ -0.3
LIMS2-206ENST00000409754 PEX11GQ96HA9 241 aa13.15□□□□□ -0.3
LIMS2-206ENST00000409754 SLC41A2Q96JW4 573 aa13.15□□□□□ -0.3
LIMS2-206ENST00000409754 DHRS1Q96LJ7 313 aa13.15□□□□□ -0.3
LIMS2-206ENST00000409754 GRIP2Q9C0E4 1043 aa13.15□□□□□ -0.3
LIMS2-206ENST00000409754 PIGUQ9H490 435 aa13.15□□□□□ -0.3
LIMS2-206ENST00000409754 TOR4AQ9NXH8 423 aa13.15□□□□□ -0.3
LIMS2-206ENST00000409754 TUBA8Q9NY65 449 aaPredicted RBP13.15□□□□□ -0.3
LIMS2-206ENST00000409754 ACAD8Q9UKU7 415 aa13.15□□□□□ -0.3
LIMS2-206ENST00000409754 SLC9A8Q9Y2E8 581 aa13.15□□□□□ -0.3
LIMS2-206ENST00000409754 CLDN4O14493 209 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 FFAR1O14842 300 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 BCKDKO14874 412 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 SIGLEC6O43699 453 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 OR10H2O60403 315 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 TFAP2AP05549 437 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 ALOX5P09917 674 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 MSL3P1P0C860 447 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 PABPC4LP0CB38 370 aaKnown RBP13.14□□□□□ -0.31
LIMS2-206ENST00000409754 ACP2P11117 423 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 ATP6V1B1P15313 513 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 RYKP34925 604 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 SEPHS1P49903 392 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 TPD52P55327 224 aaPredicted RBP13.14□□□□□ -0.31
LIMS2-206ENST00000409754 MAP4K2Q12851 820 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 KEAP1Q14145 624 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 KCNAB1Q14722 419 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 NR0B2Q15466 257 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 DUSP5Q16690 384 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 PROX2Q3B8N5 592 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 LIN52Q52LA3 116 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 EID2Q8N6I1 236 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 SIMC1Q8NDZ2 872 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 DEFB124Q8NES8 71 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 OR4D11Q8NGI4 311 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 OR52J3Q8NH60 311 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 PHF10Q8WUB8 498 aaKnown RBP13.14□□□□□ -0.31
LIMS2-206ENST00000409754 SLC9A6Q92581 669 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 CDS1Q92903 461 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 STACQ99469 402 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 GABARAPL3Q9BY60 117 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 ING2Q9H160 280 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 RIBC2Q9H4K1 309 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 TRIM45Q9H8W5 580 aaPredicted RBP13.14□□□□□ -0.31
LIMS2-206ENST00000409754 ADAP2Q9NPF8 381 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 PRTFDC1Q9NRG1 225 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 DUSP22Q9NRW4 184 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 TMEM9Q9P0T7 183 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 HSPE1-MOB4S4R3N1 261 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 WDFY3Q8IZQ1 3526 aa13.14□□□□□ -0.31
LIMS2-206ENST00000409754 A0A087WXM4 84 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 TRIM64CA6NLI5 447 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 TMEM150CB9EJG8 249 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 E9PQ18 207 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 FLRT2O43155 660 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 COQ9O75208 318 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 NME6O75414 186 aaPredicted RBP13.13□□□□□ -0.31
LIMS2-206ENST00000409754 OR2B3O76000 313 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 SOX30O94993 753 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 CCNB2O95067 398 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 CT62P0C5K7 136 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 POLR2IP36954 125 aaKnown RBP13.13□□□□□ -0.31
LIMS2-206ENST00000409754 MAP3K8P41279 467 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 PDX1P52945 283 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 NR1H2P55055 460 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 SMIM11AP58511 58 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 MAT1AQ00266 395 aaKnown RBP13.13□□□□□ -0.31
LIMS2-206ENST00000409754 IL1RL1Q01638 556 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 STX4Q12846 297 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 SLC13A2Q13183 592 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 SQSTM1Q13501 440 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 GANABQ14697 944 aaKnown RBP13.13□□□□□ -0.31
LIMS2-206ENST00000409754 ZNF311Q5JNZ3 666 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 RNF220Q5VTB9 566 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 DHRS4L2Q6PKH6 230 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 FRRS1Q6ZNA5 592 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 WDR53Q7Z5U6 358 aaPredicted RBP13.13□□□□□ -0.31
LIMS2-206ENST00000409754 VWA5B2Q8N398 1253 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 SLC5A8Q8N695 610 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 SETD9Q8NE22 299 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 CHDHQ8NE62 594 aaPredicted RBP13.13□□□□□ -0.31
LIMS2-206ENST00000409754 OR51Q1Q8NH59 317 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 VANGL1Q8TAA9 524 aaPredicted RBP13.13□□□□□ -0.31
LIMS2-206ENST00000409754 HOXB13Q92826 284 aaPredicted RBP13.13□□□□□ -0.31
LIMS2-206ENST00000409754 MVB12AQ96EY5 273 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 FEVQ99581 238 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 RBCK1Q9BYM8 510 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 CUTCQ9NTM9 273 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 CDV3Q9UKY7 258 aaKnown RBP13.13□□□□□ -0.31
LIMS2-206ENST00000409754 SATB2Q9UPW6 733 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 PCDHGA8Q9Y5G5 932 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 FRYQ5TBA9 3013 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 PCDH17O14917 1159 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms