RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 COX18Q8N8Q8 333 aa18.99■□□□□ 0.63
CHKB-201ENST00000406938 HIPK4Q8NE63 616 aa18.99■□□□□ 0.63
CHKB-201ENST00000406938 BHLHE22Q8NFJ8 381 aaPredicted RBP18.99■□□□□ 0.63
CHKB-201ENST00000406938 PIK3R3Q92569 461 aa18.99■□□□□ 0.63
CHKB-201ENST00000406938 NACC2Q96BF6 587 aa18.99■□□□□ 0.63
CHKB-201ENST00000406938 BTBD9Q96Q07 612 aa18.99■□□□□ 0.63
CHKB-201ENST00000406938 GAL3ST4Q96RP7 486 aa18.99■□□□□ 0.63
CHKB-201ENST00000406938 EXD2Q9NVH0 621 aa18.99■□□□□ 0.63
CHKB-201ENST00000406938 GIN1Q9NXP7 522 aa18.99■□□□□ 0.63
CHKB-201ENST00000406938 ANGPT4Q9Y264 503 aa18.99■□□□□ 0.63
CHKB-201ENST00000406938 SPTBN2O15020 2390 aa18.98■□□□□ 0.63
CHKB-201ENST00000406938 TMEM247A6NEH6 219 aa18.98■□□□□ 0.63
CHKB-201ENST00000406938 SLC28A2O43868 658 aa18.98■□□□□ 0.63
CHKB-201ENST00000406938 GMNNO75496 209 aa18.98■□□□□ 0.63
CHKB-201ENST00000406938 STAMBPO95630 424 aa18.98■□□□□ 0.63
CHKB-201ENST00000406938 NR2F1P10589 423 aa18.98■□□□□ 0.63
CHKB-201ENST00000406938 AQP1P29972 269 aa18.98■□□□□ 0.63
CHKB-201ENST00000406938 BTBD16Q32M84 506 aa18.98■□□□□ 0.63
CHKB-201ENST00000406938 RPS26P11Q5JNZ5 115 aaPredicted RBP18.98■□□□□ 0.63
CHKB-201ENST00000406938 HEPHL1Q6MZM0 1159 aa18.98■□□□□ 0.63
CHKB-201ENST00000406938 SLC29A4Q7RTT9 530 aa18.98■□□□□ 0.63
CHKB-201ENST00000406938 VASH2Q86V25 355 aa18.98■□□□□ 0.63
CHKB-201ENST00000406938 PROSER1Q86XN7 944 aa18.98■□□□□ 0.63
CHKB-201ENST00000406938 ANKFN1Q8N957 763 aa18.98■□□□□ 0.63
CHKB-201ENST00000406938 IMMP1LQ96LU5 166 aa18.98■□□□□ 0.63
CHKB-201ENST00000406938 WWTR1Q9GZV5 400 aa18.98■□□□□ 0.63
CHKB-201ENST00000406938 PCDHGB3Q9Y5G1 929 aa18.98■□□□□ 0.63
CHKB-201ENST00000406938 NSG1A0A0A6YYJ2 146 aa18.97■□□□□ 0.63
CHKB-201ENST00000406938 TRBV11-1A0A0K0K1C0 115 aa18.97■□□□□ 0.63
CHKB-201ENST00000406938 C2orf92A0A1B0GVN3 265 aa18.97■□□□□ 0.63
CHKB-201ENST00000406938 C5orf58C9J3I9 102 aa18.97■□□□□ 0.63
CHKB-201ENST00000406938 H0YHG0 523 aa18.97■□□□□ 0.63
CHKB-201ENST00000406938 PRKNO60260 465 aaPredicted RBP18.97■□□□□ 0.63
CHKB-201ENST00000406938 CREG1O75629 220 aa18.97■□□□□ 0.63
CHKB-201ENST00000406938 CHRM4P08173 479 aa18.97■□□□□ 0.63
CHKB-201ENST00000406938 CT45A8P0DMV1 189 aa18.97■□□□□ 0.63
CHKB-201ENST00000406938 CT45A9P0DMV2 189 aa18.97■□□□□ 0.63
CHKB-201ENST00000406938 ID4P47928 161 aa18.97■□□□□ 0.63
CHKB-201ENST00000406938 POLE2P56282 527 aa18.97■□□□□ 0.63
CHKB-201ENST00000406938 ACTR3P61158 418 aa18.97■□□□□ 0.63
CHKB-201ENST00000406938 CT45A2Q5DJT8 189 aa18.97■□□□□ 0.63
CHKB-201ENST00000406938 REEP3Q6NUK4 255 aa18.97■□□□□ 0.63
CHKB-201ENST00000406938 HSDL2Q6YN16 418 aa18.97■□□□□ 0.63
CHKB-201ENST00000406938 NDUFAF7Q7L592 441 aa18.97■□□□□ 0.63
CHKB-201ENST00000406938 OLIG3Q7RTU3 272 aa18.97■□□□□ 0.63
CHKB-201ENST00000406938 GALNT10Q86SR1 603 aa18.97■□□□□ 0.63
CHKB-201ENST00000406938 RAB43Q86YS6 212 aa18.97■□□□□ 0.63
CHKB-201ENST00000406938 SPPL2CQ8IUH8 684 aa18.97■□□□□ 0.63
CHKB-201ENST00000406938 SLC30A8Q8IWU4 369 aa18.97■□□□□ 0.63
CHKB-201ENST00000406938 ADIPOR1Q96A54 375 aa18.97■□□□□ 0.63
CHKB-201ENST00000406938 RUBCNLQ9H714 662 aa18.97■□□□□ 0.63
CHKB-201ENST00000406938 ZNF160Q9HCG1 818 aa18.97■□□□□ 0.63
CHKB-201ENST00000406938 Q9N2J8 555 aa18.97■□□□□ 0.63
CHKB-201ENST00000406938 FBXL4Q9UKA2 621 aa18.97■□□□□ 0.63
CHKB-201ENST00000406938 LIPT1Q9Y234 373 aa18.97■□□□□ 0.63
CHKB-201ENST00000406938 GPR55Q9Y2T6 319 aaPredicted RBP18.97■□□□□ 0.63
CHKB-201ENST00000406938 FREM2Q5SZK8 3169 aa18.97■□□□□ 0.63
CHKB-201ENST00000406938 GXYLT2A0PJZ3 443 aa18.96■□□□□ 0.63
CHKB-201ENST00000406938 TTC36A6NLP5 189 aa18.96■□□□□ 0.63
CHKB-201ENST00000406938 CLCN2P51788 898 aa18.96■□□□□ 0.63
CHKB-201ENST00000406938 CRISP3P54108 245 aa18.96■□□□□ 0.63
CHKB-201ENST00000406938 RNF4P78317 190 aa18.96■□□□□ 0.63
CHKB-201ENST00000406938 POU6F2P78424 691 aaPredicted RBP18.96■□□□□ 0.63
CHKB-201ENST00000406938 ELF3P78545 371 aaPredicted RBP18.96■□□□□ 0.63
CHKB-201ENST00000406938 CCNIQ14094 377 aa18.96■□□□□ 0.63
CHKB-201ENST00000406938 EXT1Q16394 746 aa18.96■□□□□ 0.63
CHKB-201ENST00000406938 GPAT3Q53EU6 434 aa18.96■□□□□ 0.63
CHKB-201ENST00000406938 LRRC23Q53EV4 343 aaPredicted RBP18.96■□□□□ 0.63
CHKB-201ENST00000406938 DCST2Q5T1A1 773 aa18.96■□□□□ 0.63
CHKB-201ENST00000406938 CCNJQ5T5M9 372 aa18.96■□□□□ 0.63
CHKB-201ENST00000406938 INTS11Q5TA45 600 aaKnown RBP18.96■□□□□ 0.63
CHKB-201ENST00000406938 PLAG1Q6DJT9 500 aa18.96■□□□□ 0.63
CHKB-201ENST00000406938 METTL25Q8N6Q8 603 aa18.96■□□□□ 0.63
CHKB-201ENST00000406938 ZSCAN1Q8NBB4 408 aa18.96■□□□□ 0.63
CHKB-201ENST00000406938 OR4N2Q8NGD1 307 aa18.96■□□□□ 0.63
CHKB-201ENST00000406938 ADAMTS17Q8TE56 1095 aa18.96■□□□□ 0.63
CHKB-201ENST00000406938 FAM162AQ96A26 154 aa18.96■□□□□ 0.63
CHKB-201ENST00000406938 RMND5BQ96G75 393 aaPredicted RBP18.96■□□□□ 0.63
CHKB-201ENST00000406938 LRGUKQ96M69 825 aa18.96■□□□□ 0.63
CHKB-201ENST00000406938 NSMCE2Q96MF7 247 aa18.96■□□□□ 0.63
CHKB-201ENST00000406938 TRNT1Q96Q11 434 aaKnown RBP18.96■□□□□ 0.63
CHKB-201ENST00000406938 TREX2Q9BQ50 279 aaPredicted RBP18.96■□□□□ 0.63
CHKB-201ENST00000406938 TRIM15Q9C019 465 aa18.96■□□□□ 0.63
CHKB-201ENST00000406938 NXF5Q9H1B4 397 aaKnown RBP18.96■□□□□ 0.63
CHKB-201ENST00000406938 GORASP2Q9H8Y8 452 aa18.96■□□□□ 0.63
CHKB-201ENST00000406938 P4HTMQ9NXG6 502 aa18.96■□□□□ 0.63
CHKB-201ENST00000406938 MSRB2Q9Y3D2 182 aa18.96■□□□□ 0.63
CHKB-201ENST00000406938 FRG2CA6NGY1 282 aa18.96■□□□□ 0.63
CHKB-201ENST00000406938 GCM2O75603 506 aaPredicted RBP18.96■□□□□ 0.63
CHKB-201ENST00000406938 SOX30O94993 753 aa18.96■□□□□ 0.63
CHKB-201ENST00000406938 H6PDO95479 791 aa18.96■□□□□ 0.63
CHKB-201ENST00000406938 PPICP45877 212 aa18.96■□□□□ 0.63
CHKB-201ENST00000406938 PCBP3P57721 371 aaKnown RBP18.96■□□□□ 0.63
CHKB-201ENST00000406938 HPCAP84074 193 aa18.96■□□□□ 0.63
CHKB-201ENST00000406938 CLN3Q13286 438 aa18.96■□□□□ 0.63
CHKB-201ENST00000406938 GNA13Q14344 377 aa18.96■□□□□ 0.63
CHKB-201ENST00000406938 ARHGAP11BQ3KRB8 267 aa18.96■□□□□ 0.63
CHKB-201ENST00000406938 HLA-DQA1Q5Y7H0 255 aa18.96■□□□□ 0.63
CHKB-201ENST00000406938 CHDHQ8NE62 594 aaPredicted RBP18.96■□□□□ 0.63
CHKB-201ENST00000406938 BTBD2Q9BX70 525 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms