RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 C12orf29Q8N999 325 aa4.26□□□□□ -1.73
HMGB3P19-201ENST00000403971 MSANTD4Q8NCY6 345 aa4.26□□□□□ -1.73
HMGB3P19-201ENST00000403971 OR6S1Q8NH40 331 aa4.26□□□□□ -1.73
HMGB3P19-201ENST00000403971 SPPL2BQ8TCT7 592 aa4.26□□□□□ -1.73
HMGB3P19-201ENST00000403971 GRK7Q8WTQ7 553 aa4.26□□□□□ -1.73
HMGB3P19-201ENST00000403971 C2orf15Q8WU43 125 aaKnown RBP4.26□□□□□ -1.73
HMGB3P19-201ENST00000403971 CTNNBL1Q8WYA6 563 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P19-201ENST00000403971 NXPE2Q96DL1 559 aa4.26□□□□□ -1.73
HMGB3P19-201ENST00000403971 HSFY1Q96LI6 401 aa4.26□□□□□ -1.73
HMGB3P19-201ENST00000403971 PCDHB18PQ96TA0 734 aa4.26□□□□□ -1.73
HMGB3P19-201ENST00000403971 PKMYT1Q99640 499 aa4.26□□□□□ -1.73
HMGB3P19-201ENST00000403971 DGCR6LQ9BY27 220 aa4.26□□□□□ -1.73
HMGB3P19-201ENST00000403971 DUSP16Q9BY84 665 aa4.26□□□□□ -1.73
HMGB3P19-201ENST00000403971 UBXN6Q9BZV1 441 aa4.26□□□□□ -1.73
HMGB3P19-201ENST00000403971 TSGA10Q9BZW7 698 aa4.26□□□□□ -1.73
HMGB3P19-201ENST00000403971 ACP6Q9NPH0 428 aa4.26□□□□□ -1.73
HMGB3P19-201ENST00000403971 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.26□□□□□ -1.73
HMGB3P19-201ENST00000403971 HACD3Q9P035 362 aa4.26□□□□□ -1.73
HMGB3P19-201ENST00000403971 MTRRQ9UBK8 725 aa4.26□□□□□ -1.73
HMGB3P19-201ENST00000403971 HMGXB4Q9UGU5 601 aa4.26□□□□□ -1.73
HMGB3P19-201ENST00000403971 IL36AQ9UHA7 158 aa4.26□□□□□ -1.73
HMGB3P19-201ENST00000403971 PILRBQ9UKJ0 227 aa4.26□□□□□ -1.73
HMGB3P19-201ENST00000403971 TSPAN16Q9UKR8 245 aa4.26□□□□□ -1.73
HMGB3P19-201ENST00000403971 PYCARDQ9ULZ3 195 aa4.26□□□□□ -1.73
HMGB3P19-201ENST00000403971 COLEC10Q9Y6Z7 277 aa4.26□□□□□ -1.73
HMGB3P19-201ENST00000403971 HELZP42694 1942 aaKnown RBP4.26□□□□□ -1.73
HMGB3P19-201ENST00000403971 TRIOBPQ9H2D6 2365 aa4.26□□□□□ -1.73
HMGB3P19-201ENST00000403971 BRWD1Q9NSI6 2320 aa4.26□□□□□ -1.73
HMGB3P19-201ENST00000403971 LAMA2P24043 3122 aaKnown RBP4.26□□□□□ -1.73
HMGB3P19-201ENST00000403971 C2orf16Q68DN1 1984 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 DOCK8Q8NF50 2099 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 PRRC2BQ5JSZ5 2229 aaKnown RBP4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 TNRC18O15417 2968 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 MYBPHLA2RUH7 354 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 ANTXRLA6NF34 631 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 C15orf61A6NNL5 157 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 KIF2AO00139 706 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 XPO1O14980 1071 aaKnown RBP4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 KIF5CO60282 957 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 ACSL4O60488 711 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 KRT33AO76009 404 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 YES1P07947 543 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 FAM200BP0CF97 657 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 ITIH1P19827 911 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 RBMS1P29558 406 aaKnown RBP4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 MMP12P39900 470 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 ACADSBP45954 432 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 RANBP2P49792 3224 aaKnown RBP4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 GUCY2DQ02846 1103 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 BST2Q10589 180 aaKnown RBP4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 EFTUD2Q15029 972 aaKnown RBP eCLIP4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 PSMD5Q16401 504 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 LIN9Q5TKA1 542 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 TAF3Q5VWG9 929 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 TPGS2Q68CL5 300 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 ADAM5Q6NVV9 412 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 FIP1L1Q6UN15 594 aaKnown RBP4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 DHRS11Q6UWP2 260 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 ARCQ7LC44 396 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 TMCO2Q7Z6W1 182 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 KIAA1328Q86T90 577 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 TMEM110Q86TL2 294 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 ANKRD46Q86W74 232 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 ERICH1Q86X53 443 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 AQP12AQ8IXF9 295 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 TDHQ8IZJ6 230 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 MCOLN2Q8IZK6 566 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 AMER3Q8N944 861 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 OR7G3Q8NG95 312 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 OR10T2Q8NGX3 314 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 MAPK15Q8TD08 544 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 SLC2A14Q8TDB8 520 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 SAP25Q8TEE9 199 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 ZNRF4Q8WWF5 429 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 VMP1Q96GC9 406 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 SMARCD1Q96GM5 515 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 PCED1BQ96HM7 432 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 TSSK2Q96PF2 358 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 TGS1Q96RS0 853 aaKnown RBP4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 ATG101Q9BSB4 218 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 ZBP1Q9H171 429 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 PRO3102Q9H379 93 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 DPEP3Q9H4B8 488 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 C5orf66Q9H5L9 145 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 C10orf88Q9H8K7 445 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 SRD5A3Q9H8P0 318 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 CSNK1G1Q9HCP0 422 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 MRPL47Q9HD33 250 aaKnown RBP4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 DMAP1Q9NPF5 467 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 COMMD8Q9NX08 183 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 SLCO1C1Q9NYB5 712 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 ADAM22Q9P0K1 906 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 UVRAGQ9P2Y5 699 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 LCMT1Q9UIC8 334 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 ELF5Q9UKW6 265 aaPredicted RBP4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 POMT2Q9UKY4 750 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 GPR132Q9UNW8 380 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 CHD5Q8TDI0 1954 aa4.25□□□□□ -1.73
HMGB3P19-201ENST00000403971 NUP210Q8TEM1 1887 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P19-201ENST00000403971 LAMA3Q16787 3333 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms