RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 ABI3BPQ7Z7G0 1075 aa17.27■□□□□ 0.36
TRAF3-203ENST00000392745 NLGN4YQ8NFZ3 816 aaPredicted RBP17.27■□□□□ 0.36
TRAF3-203ENST00000392745 C16orf78Q8WTQ4 265 aa17.27■□□□□ 0.36
TRAF3-203ENST00000392745 PHF7Q9BWX1 381 aaPredicted RBP17.27■□□□□ 0.36
TRAF3-203ENST00000392745 ICKQ9UPZ9 632 aa17.27■□□□□ 0.36
TRAF3-203ENST00000392745 ANKDD1BA6NHY2 528 aa17.27■□□□□ 0.35
TRAF3-203ENST00000392745 LCMT2O60294 686 aaKnown RBP17.27■□□□□ 0.35
TRAF3-203ENST00000392745 TSPAN19P0C672 248 aa17.27■□□□□ 0.35
TRAF3-203ENST00000392745 CCNYL3P0C7X3 344 aa17.27■□□□□ 0.35
TRAF3-203ENST00000392745 RBBP4Q09028 425 aa17.27■□□□□ 0.35
TRAF3-203ENST00000392745 FAPQ12884 760 aa17.27■□□□□ 0.35
TRAF3-203ENST00000392745 PUM1Q14671 1186 aaKnown RBP eCLIP17.27■□□□□ 0.35
TRAF3-203ENST00000392745 SEC23BQ15437 767 aa17.27■□□□□ 0.35
TRAF3-203ENST00000392745 TMEM38AQ9H6F2 299 aa17.27■□□□□ 0.35
TRAF3-203ENST00000392745 UBE2ZQ9H832 354 aaPredicted RBP17.27■□□□□ 0.35
TRAF3-203ENST00000392745 YARS2Q9Y2Z4 477 aaKnown RBP17.27■□□□□ 0.35
TRAF3-203ENST00000392745 ZNF780AO75290 641 aaPredicted RBP17.26■□□□□ 0.35
TRAF3-203ENST00000392745 PKLRP30613 574 aa17.26■□□□□ 0.35
TRAF3-203ENST00000392745 TAS2R50P59544 299 aa17.26■□□□□ 0.35
TRAF3-203ENST00000392745 SNRPGP62308 76 aaKnown RBP17.26■□□□□ 0.35
TRAF3-203ENST00000392745 PRDX1Q06830 199 aaKnown RBP17.26■□□□□ 0.35
TRAF3-203ENST00000392745 NCF4Q15080 339 aa17.26■□□□□ 0.35
TRAF3-203ENST00000392745 SLC9B2Q86UD5 537 aa17.26■□□□□ 0.35
TRAF3-203ENST00000392745 GOT1L1Q8NHS2 421 aaPredicted RBP17.26■□□□□ 0.35
TRAF3-203ENST00000392745 CLIP3Q96DZ5 547 aa17.26■□□□□ 0.35
TRAF3-203ENST00000392745 F2RL3Q96RI0 385 aa17.26■□□□□ 0.35
TRAF3-203ENST00000392745 TSSK6Q9BXA6 273 aa17.26■□□□□ 0.35
TRAF3-203ENST00000392745 ZNF717Q9BY31 904 aaPredicted RBP17.26■□□□□ 0.35
TRAF3-203ENST00000392745 BHLHE41Q9C0J9 482 aaPredicted RBP17.26■□□□□ 0.35
TRAF3-203ENST00000392745 REEP4Q9H6H4 257 aa17.26■□□□□ 0.35
TRAF3-203ENST00000392745 MVB12BQ9H7P6 319 aa17.26■□□□□ 0.35
TRAF3-203ENST00000392745 C2orf42Q9NWW7 574 aa17.26■□□□□ 0.35
TRAF3-203ENST00000392745 TOR4AQ9NXH8 423 aa17.26■□□□□ 0.35
TRAF3-203ENST00000392745 LRRC72A6NJI9 287 aa17.26■□□□□ 0.35
TRAF3-203ENST00000392745 CRYZL1O95825 349 aa17.26■□□□□ 0.35
TRAF3-203ENST00000392745 IFNW1P05000 195 aa17.26■□□□□ 0.35
TRAF3-203ENST00000392745 CHI3L1P36222 383 aaPredicted RBP17.26■□□□□ 0.35
TRAF3-203ENST00000392745 PCBP3P57721 371 aaKnown RBP17.26■□□□□ 0.35
TRAF3-203ENST00000392745 CSNK1G2P78368 415 aa17.26■□□□□ 0.35
TRAF3-203ENST00000392745 REEP5Q00765 189 aa17.26■□□□□ 0.35
TRAF3-203ENST00000392745 ELOAQ14241 798 aaKnown RBP17.26■□□□□ 0.35
TRAF3-203ENST00000392745 PRSS53Q2L4Q9 553 aa17.26■□□□□ 0.35
TRAF3-203ENST00000392745 FLYWCH1Q4VC44 716 aa17.26■□□□□ 0.35
TRAF3-203ENST00000392745 MEDAGQ5VYS4 303 aa17.26■□□□□ 0.35
TRAF3-203ENST00000392745 SIGIRRQ6IA17 410 aa17.26■□□□□ 0.35
TRAF3-203ENST00000392745 RAB42Q8N4Z0 105 aa17.26■□□□□ 0.35
TRAF3-203ENST00000392745 TCEANCQ8N8B7 351 aa17.26■□□□□ 0.35
TRAF3-203ENST00000392745 OR2L8Q8NGY9 312 aa17.26■□□□□ 0.35
TRAF3-203ENST00000392745 ENKURQ8TC29 256 aa17.26■□□□□ 0.35
TRAF3-203ENST00000392745 ZFAND1Q8TCF1 268 aa17.26■□□□□ 0.35
TRAF3-203ENST00000392745 SNAPC3Q92966 411 aa17.26■□□□□ 0.35
TRAF3-203ENST00000392745 WDR92Q96MX6 357 aa17.26■□□□□ 0.35
TRAF3-203ENST00000392745 ATP6V1HQ9UI12 483 aa17.26■□□□□ 0.35
TRAF3-203ENST00000392745 H3BN98 237 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 RTCAO00442 366 aaKnown RBP17.25■□□□□ 0.35
TRAF3-203ENST00000392745 PLPP1O14494 284 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 SEC14L5O43304 696 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 FURINP09958 794 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 OSMP13725 252 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 C2orf80Q0P641 193 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 MLLT11Q13015 90 aaPredicted RBP17.25■□□□□ 0.35
TRAF3-203ENST00000392745 QPRTQ15274 297 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 FAM71E1Q6IPT2 247 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 FAM180BQ6P0A1 224 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 FANCMQ8IYD8 2048 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 MMP21Q8N119 569 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 GDPD1Q8N9F7 314 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 ATP6V1C2Q8NEY4 427 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 MED30Q96HR3 178 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 NELL2Q99435 816 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 GON7Q9BXV9 100 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 MS4A8Q9BY19 250 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 UCK2Q9BZX2 261 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 TMEM168Q9H0V1 697 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 C6orf106Q9H6K1 298 aaPredicted RBP17.25■□□□□ 0.35
TRAF3-203ENST00000392745 GON4LQ3T8J9 2241 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 USP34Q70CQ2 3546 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 MDC1Q14676 2089 aaKnown RBP17.25■□□□□ 0.35
TRAF3-203ENST00000392745 C10orf142B7Z368 130 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 POLR1CO15160 346 aaPredicted RBP17.25■□□□□ 0.35
TRAF3-203ENST00000392745 AKR7A2O43488 359 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 PRICKLE3O43900 615 aaPredicted RBP17.25■□□□□ 0.35
TRAF3-203ENST00000392745 ICMTO60725 284 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 SEMA4FO95754 770 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 SDC2P34741 201 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 SNRPD2P62316 118 aaKnown RBP17.25■□□□□ 0.35
TRAF3-203ENST00000392745 TATDN3Q17R31 274 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 RPS26P11Q5JNZ5 115 aaPredicted RBP17.25■□□□□ 0.35
TRAF3-203ENST00000392745 KHDRBS2Q5VWX1 349 aaKnown RBP17.25■□□□□ 0.35
TRAF3-203ENST00000392745 TRIM40Q6P9F5 258 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 CEACAM20Q6UY09 585 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.25■□□□□ 0.35
TRAF3-203ENST00000392745 SYT14Q8NB59 555 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 PROKR2Q8NFJ6 384 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 RSPO3Q9BXY4 272 aaPredicted RBP17.25■□□□□ 0.35
TRAF3-203ENST00000392745 SPHK1Q9NYA1 384 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 USP36Q9P275 1121 aaKnown RBP17.25■□□□□ 0.35
TRAF3-203ENST00000392745 MAPRE3Q9UPY8 281 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 KNL1Q8NG31 2342 aa17.25■□□□□ 0.35
TRAF3-203ENST00000392745 ARRDC5A6NEK1 342 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms