RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 POLE3Q9NRF9 147 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 PSMD9O00233 223 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 ADH1AP07327 375 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 TRAPPC2P0DI81 140 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 TRAPPC2BP0DI82 140 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 STK11Q15831 433 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 COL28A1Q2UY09 1125 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 FAM209AQ5JX71 171 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 COX18Q8N8Q8 333 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 OR8J2Q8NGG1 315 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 OR10G6Q8NH81 332 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 SMPDL3AQ92484 453 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 KXD1Q9BQD3 176 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 P2RY12Q9H244 342 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 PCDHGB1Q9Y5G3 927 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 FER1L6Q2WGJ9 1857 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 A0A1W2PPL8 197 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 LRRC72A6NJI9 287 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 C1QTNF3-AMACRE9PGA6 284 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 PIP5K1CO60331 668 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 RCBTB2O95199 551 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 PRNPP04156 253 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 IGFBP1P08833 259 aaPredicted RBP13.5□□□□□ -0.25
RTF1-201ENST00000389629 ZNF10P21506 573 aaPredicted RBP13.5□□□□□ -0.25
RTF1-201ENST00000389629 GIPRP48546 466 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 CRHR2Q13324 411 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 ASAH1Q13510 395 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 CCDC107Q8WV48 283 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 OVCA2Q8WZ82 227 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 RNF31Q96EP0 1072 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 LGR4Q9BXB1 951 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 ZNF436Q9C0F3 470 aaPredicted RBP13.5□□□□□ -0.25
RTF1-201ENST00000389629 ATP13A2Q9NQ11 1180 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 CKLFQ9UBR5 152 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 NINQ8N4C6 2090 aa13.5□□□□□ -0.25
RTF1-201ENST00000389629 SLC43A1O75387 559 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 CSF3P09919 207 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 ZCCHC12Q6PEW1 402 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 LYPD4Q6UWN0 246 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 SLC44A3Q8N4M1 653 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 THAP6Q8TBB0 222 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 GIMAP1Q8WWP7 306 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 NUS1Q96E22 293 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 B3GNT4Q9C0J1 378 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 ELL3Q9HB65 397 aaPredicted RBP13.49□□□□□ -0.25
RTF1-201ENST00000389629 ZSCAN32Q9NX65 697 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 IL36AQ9UHA7 158 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 COPS3Q9UNS2 423 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 AK6Q9Y3D8 172 aaKnown RBP13.49□□□□□ -0.25
RTF1-201ENST00000389629 TAF1LQ8IZX4 1826 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 C8AP07357 584 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 CBLP22681 906 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 HES5Q5TA89 166 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 SLC22A10Q63ZE4 541 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 KCTD9Q7L273 389 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 GRAMD2AQ8IUY3 354 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 CLDN22Q8N7P3 220 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 CHST14Q8NCH0 376 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 TM9SF4Q92544 642 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 ECHDC3Q96DC8 303 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 OR2A14Q96R47 310 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 GABRPO00591 440 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 KLKB1P03952 638 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 BMP8BP34820 402 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 CRYZQ08257 329 aaKnown RBP13.49□□□□□ -0.25
RTF1-201ENST00000389629 BMP8AQ7Z5Y6 402 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 PARGQ86W56 976 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 CBARPQ8N350 705 aaPredicted RBP13.49□□□□□ -0.25
RTF1-201ENST00000389629 OR51L1Q8NGJ5 315 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 FANK1Q8TC84 345 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 DOK4Q8TEW6 326 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 FOXJ1Q92949 421 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 CXorf40BQ96DE9 158 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 CDCP1Q9H5V8 836 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 NLGN3Q9NZ94 848 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 CAP1Q01518 475 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 PODNL1Q6PEZ8 512 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 MSRB3Q8IXL7 192 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 NRMQ8IXM6 262 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 TCEAL4Q96EI5 215 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 C7orf34Q96L11 122 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 DDX31Q9H8H2 851 aaKnown RBP13.49□□□□□ -0.25
RTF1-201ENST00000389629 HCSTQ9UBK5 93 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 PADI2Q9Y2J8 665 aa13.49□□□□□ -0.25
RTF1-201ENST00000389629 ZFC3H1O60293 1989 aaKnown RBP13.48□□□□□ -0.25
RTF1-201ENST00000389629 KRT33AO76009 404 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 GTF2F2P13984 249 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 SLC14A1Q13336 389 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 PON3Q15166 354 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 RPTNQ6XPR3 784 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 VRK3Q8IV63 474 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 TMIEQ8NEW7 156 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 OR5D16Q8NGK9 328 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 RBPMSQ93062 196 aaKnown RBP13.48□□□□□ -0.25
RTF1-201ENST00000389629 COMMD4Q9H0A8 199 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 MRPS23Q9Y3D9 190 aaKnown RBP13.48□□□□□ -0.25
RTF1-201ENST00000389629 PCDHGB7Q9Y5F8 929 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 GREB1LQ9C091 1923 aaPredicted RBP13.48□□□□□ -0.25
RTF1-201ENST00000389629 UNCXA6NJT0 531 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 UGDHO60701 494 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms