RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 UBFD1O14562 309 aaKnown RBP12.87□□□□□ -0.35
SHOX-202ENST00000381575 DIAPH2O60879 1101 aa12.87□□□□□ -0.35
SHOX-202ENST00000381575 ERN1O75460 977 aaKnown RBP12.87□□□□□ -0.35
SHOX-202ENST00000381575 DRD5P21918 477 aa12.87□□□□□ -0.35
SHOX-202ENST00000381575 RIPPLY3P57055 190 aa12.87□□□□□ -0.35
SHOX-202ENST00000381575 ZNF155Q12901 538 aaPredicted RBP12.87□□□□□ -0.35
SHOX-202ENST00000381575 FOXF2Q12947 444 aa12.87□□□□□ -0.35
SHOX-202ENST00000381575 SLC29A2Q14542 456 aa12.87□□□□□ -0.35
SHOX-202ENST00000381575 ERCC6LQ2NKX8 1250 aa12.87□□□□□ -0.35
SHOX-202ENST00000381575 SPIN4Q56A73 249 aa12.87□□□□□ -0.35
SHOX-202ENST00000381575 SPDYAQ5MJ70 313 aa12.87□□□□□ -0.35
SHOX-202ENST00000381575 TRMT10CQ7L0Y3 403 aaKnown RBP12.87□□□□□ -0.35
SHOX-202ENST00000381575 SLC44A2Q8IWA5 706 aaPredicted RBP12.87□□□□□ -0.35
SHOX-202ENST00000381575 TRIM42Q8IWZ5 723 aa12.87□□□□□ -0.35
SHOX-202ENST00000381575 LINC01560Q8TB33 94 aa12.87□□□□□ -0.35
SHOX-202ENST00000381575 ZNF675Q8TD23 568 aa12.87□□□□□ -0.35
SHOX-202ENST00000381575 MZB1Q8WU39 189 aa12.87□□□□□ -0.35
SHOX-202ENST00000381575 L3HYPDHQ96EM0 354 aa12.87□□□□□ -0.35
SHOX-202ENST00000381575 VSTM2LQ96N03 204 aa12.87□□□□□ -0.35
SHOX-202ENST00000381575 BTBD9Q96Q07 612 aa12.87□□□□□ -0.35
SHOX-202ENST00000381575 SHCBP1LQ9BZQ2 653 aa12.87□□□□□ -0.35
SHOX-202ENST00000381575 C12orf65Q9H3J6 166 aaKnown RBP12.87□□□□□ -0.35
SHOX-202ENST00000381575 SLC24A3Q9HC58 644 aa12.87□□□□□ -0.35
SHOX-202ENST00000381575 TNFRSF12AQ9NP84 129 aa12.87□□□□□ -0.35
SHOX-202ENST00000381575 MID1IP1Q9NPA3 183 aa12.87□□□□□ -0.35
SHOX-202ENST00000381575 SLC35C2Q9NQQ7 365 aa12.87□□□□□ -0.35
SHOX-202ENST00000381575 SENP1Q9P0U3 644 aa12.87□□□□□ -0.35
SHOX-202ENST00000381575 PSMC3IPQ9P2W1 217 aaPredicted RBP12.87□□□□□ -0.35
SHOX-202ENST00000381575 CBLCQ9ULV8 474 aa12.87□□□□□ -0.35
SHOX-202ENST00000381575 EXO1Q9UQ84 846 aaKnown RBP12.87□□□□□ -0.35
SHOX-202ENST00000381575 PLEKHA6Q9Y2H5 1048 aa12.87□□□□□ -0.35
SHOX-202ENST00000381575 WIF1Q9Y5W5 379 aa12.87□□□□□ -0.35
SHOX-202ENST00000381575 ROS1P08922 2347 aa12.87□□□□□ -0.35
SHOX-202ENST00000381575 MBD3L4A6NDZ8 208 aaPredicted RBP12.86□□□□□ -0.35
SHOX-202ENST00000381575 MBD3L3A6NE82 208 aaPredicted RBP12.86□□□□□ -0.35
SHOX-202ENST00000381575 OR6C70A6NIJ9 312 aa12.86□□□□□ -0.35
SHOX-202ENST00000381575 MBD3L5A6NJ08 208 aaPredicted RBP12.86□□□□□ -0.35
SHOX-202ENST00000381575 CD8B2A6NJW9 211 aa12.86□□□□□ -0.35
SHOX-202ENST00000381575 A6NNC1 897 aa12.86□□□□□ -0.35
SHOX-202ENST00000381575 TO15178 435 aa12.86□□□□□ -0.35
SHOX-202ENST00000381575 TSPAN2O60636 221 aa12.86□□□□□ -0.35
SHOX-202ENST00000381575 JUNP05412 331 aaKnown RBP12.86□□□□□ -0.35
SHOX-202ENST00000381575 ANXA4P09525 319 aaPredicted RBP12.86□□□□□ -0.35
SHOX-202ENST00000381575 CYP4B1P13584 511 aa12.86□□□□□ -0.35
SHOX-202ENST00000381575 DRD2P14416 443 aa12.86□□□□□ -0.35
SHOX-202ENST00000381575 CD1EP15812 388 aa12.86□□□□□ -0.35
SHOX-202ENST00000381575 IL12BP29460 328 aa12.86□□□□□ -0.35
SHOX-202ENST00000381575 DGKQP52824 942 aa12.86□□□□□ -0.35
SHOX-202ENST00000381575 DCAF7P61962 342 aa12.86□□□□□ -0.35
SHOX-202ENST00000381575 RCAN2Q14206 197 aa12.86□□□□□ -0.35
SHOX-202ENST00000381575 CEBPEQ15744 281 aa12.86□□□□□ -0.35
SHOX-202ENST00000381575 SH2D4BQ5SQS7 431 aa12.86□□□□□ -0.35
SHOX-202ENST00000381575 TMEM81Q6P7N7 255 aa12.86□□□□□ -0.35
SHOX-202ENST00000381575 LARP4Q71RC2 724 aaKnown RBP eCLIP12.86□□□□□ -0.35
SHOX-202ENST00000381575 PLCZ1Q86YW0 608 aa12.86□□□□□ -0.35
SHOX-202ENST00000381575 SLC22A9Q8IVM8 553 aa12.86□□□□□ -0.35
SHOX-202ENST00000381575 IFT20Q8IY31 132 aa12.86□□□□□ -0.35
SHOX-202ENST00000381575 GCNT2Q8N0V5 402 aa12.86□□□□□ -0.35
SHOX-202ENST00000381575 GBP7Q8N8V2 638 aaPredicted RBP12.86□□□□□ -0.35
SHOX-202ENST00000381575 MBD3L2Q8NHZ7 208 aaPredicted RBP12.86□□□□□ -0.35
SHOX-202ENST00000381575 BBS4Q96RK4 519 aa12.86□□□□□ -0.35
SHOX-202ENST00000381575 G6PC3Q9BUM1 346 aa12.86□□□□□ -0.35
SHOX-202ENST00000381575 TXLNGYQ9BZA5 131 aa12.86□□□□□ -0.35
SHOX-202ENST00000381575 OR2B2Q9GZK3 357 aa12.86□□□□□ -0.35
SHOX-202ENST00000381575 RASSF1Q9NS23 344 aa12.86□□□□□ -0.35
SHOX-202ENST00000381575 GIMAP4Q9NUV9 329 aa12.86□□□□□ -0.35
SHOX-202ENST00000381575 TAS2R10Q9NYW0 307 aa12.86□□□□□ -0.35
SHOX-202ENST00000381575 FLRT3Q9NZU0 649 aa12.86□□□□□ -0.35
SHOX-202ENST00000381575 ZNF629Q9UEG4 869 aaPredicted RBP12.86□□□□□ -0.35
SHOX-202ENST00000381575 RPH3AQ9Y2J0 694 aaPredicted RBP12.86□□□□□ -0.35
SHOX-202ENST00000381575 POLR3HQ9Y535 204 aaPredicted RBP12.86□□□□□ -0.35
SHOX-202ENST00000381575 ARID1AO14497 2285 aa12.86□□□□□ -0.35
SHOX-202ENST00000381575 SMIM23A6NLE4 172 aa12.85□□□□□ -0.35
SHOX-202ENST00000381575 CLCA1A8K7I4 914 aa12.85□□□□□ -0.35
SHOX-202ENST00000381575 G3V2L1 256 aa12.85□□□□□ -0.35
SHOX-202ENST00000381575 SCO2O43819 266 aa12.85□□□□□ -0.35
SHOX-202ENST00000381575 CDH16O75309 829 aa12.85□□□□□ -0.35
SHOX-202ENST00000381575 ACTL6AO96019 429 aa12.85□□□□□ -0.35
SHOX-202ENST00000381575 ENO1P06733 434 aaKnown RBP12.85□□□□□ -0.35
SHOX-202ENST00000381575 TMIGD3P0DMS9 266 aaPredicted RBP12.85□□□□□ -0.35
SHOX-202ENST00000381575 CTSSP25774 331 aa12.85□□□□□ -0.35
SHOX-202ENST00000381575 KRT20P35900 424 aa12.85□□□□□ -0.35
SHOX-202ENST00000381575 MC3RP41968 323 aa12.85□□□□□ -0.35
SHOX-202ENST00000381575 PKNOX1P55347 436 aa12.85□□□□□ -0.35
SHOX-202ENST00000381575 C2orf80Q0P641 193 aa12.85□□□□□ -0.35
SHOX-202ENST00000381575 SNTA1Q13424 505 aa12.85□□□□□ -0.35
SHOX-202ENST00000381575 FBXL19-AS1Q494R0 122 aa12.85□□□□□ -0.35
SHOX-202ENST00000381575 TMEM107Q6UX40 140 aa12.85□□□□□ -0.35
SHOX-202ENST00000381575 LUZP2Q86TE4 346 aa12.85□□□□□ -0.35
SHOX-202ENST00000381575 IFNEQ86WN2 208 aa12.85□□□□□ -0.35
SHOX-202ENST00000381575 CDC20BQ86Y33 519 aa12.85□□□□□ -0.35
SHOX-202ENST00000381575 FAM9CQ8IZT9 166 aa12.85□□□□□ -0.35
SHOX-202ENST00000381575 INTS12Q96CB8 462 aaKnown RBP12.85□□□□□ -0.35
SHOX-202ENST00000381575 TMCO6Q96DC7 493 aa12.85□□□□□ -0.35
SHOX-202ENST00000381575 C11orf24Q96F05 449 aaPredicted RBP12.85□□□□□ -0.35
SHOX-202ENST00000381575 RMND5BQ96G75 393 aaPredicted RBP12.85□□□□□ -0.35
SHOX-202ENST00000381575 ST6GALNAC2Q9UJ37 374 aa12.85□□□□□ -0.35
SHOX-202ENST00000381575 DKKL1Q9UK85 242 aa12.85□□□□□ -0.35
SHOX-202ENST00000381575 OR10H1Q9Y4A9 318 aa12.85□□□□□ -0.35
SHOX-202ENST00000381575 PTGDR2Q9Y5Y4 395 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms