RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 C17orf64Q86WR6 236 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 METTL4Q8N3J2 472 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 CIDECQ96AQ7 238 aaPredicted RBP7.25□□□□□ -1.25
CDKL5-202ENST00000379996 TM4SF19Q96DZ7 209 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 ZNF764Q96H86 408 aaPredicted RBP7.25□□□□□ -1.25
CDKL5-202ENST00000379996 REEP4Q9H6H4 257 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 REEP1Q9H902 201 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 SP140LQ9H930 580 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 LHX9Q9NQ69 397 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 VPS4AQ9UN37 437 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 MAPRE3Q9UPY8 281 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 ZNF451Q9Y4E5 1061 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 ORC6Q9Y5N6 252 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 AGAP5A6NIR3 686 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 J3KTA2 159 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 TAF4O00268 1085 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 SIGLEC6O43699 453 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 ATP6V1G1O75348 118 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 KCNK2O95069 426 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 PTHP01270 115 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 PIPP12273 146 aaPredicted RBP7.25□□□□□ -1.25
CDKL5-202ENST00000379996 CD36P16671 472 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 TNFRSF1BP20333 461 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 GADD45AP24522 165 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 GAS1P54826 345 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 RPS13P62277 151 aaKnown RBP7.25□□□□□ -1.25
CDKL5-202ENST00000379996 TUBA1BP68363 451 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 CSNK1G2P78368 415 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 ZIC1Q15915 447 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 DGUOKQ16854 277 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 CPTPQ5TA50 214 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 ANXA8L1Q5VT79 327 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 RNLSQ5VYX0 342 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 ZNF621Q6ZSS3 439 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 TUBA1AQ71U36 451 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 COMMD6Q7Z4G1 85 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 SULF2Q8IWU5 870 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 KRT78Q8N1N4 520 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 MFSD9Q8NBP5 474 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 PATE1Q8WXA2 126 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 PROX1Q92786 737 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 IL17FQ96PD4 163 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 KCNC2Q96PR1 638 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 SLAMF7Q9NQ25 335 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 SEMA4GQ9NTN9 838 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 LRIT1Q9P2V4 623 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 PLAGL1Q9UM63 463 aa7.25□□□□□ -1.25
CDKL5-202ENST00000379996 TMEM247A6NEH6 219 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 PDPK1O15530 556 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 FAM20BO75063 409 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 SEMA3DO95025 777 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 NADKO95544 446 aaPredicted RBP7.24□□□□□ -1.25
CDKL5-202ENST00000379996 PROS1P07225 676 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 PTX3P26022 381 aaPredicted RBP7.24□□□□□ -1.25
CDKL5-202ENST00000379996 LIM2P55344 173 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 RPS15AP62244 130 aaKnown RBP7.24□□□□□ -1.25
CDKL5-202ENST00000379996 PRKCDQ05655 676 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 TRA2AQ13595 282 aaKnown RBP eCLIP7.24□□□□□ -1.25
CDKL5-202ENST00000379996 INAQ16352 499 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 SSX1Q16384 188 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 EXOC3L2Q2M3D2 409 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 SAXO2Q658L1 398 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 KLHL17Q6TDP4 642 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 PRR23CQ6ZRP0 262 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 AHSA2Q719I0 299 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 COMTD1Q86VU5 262 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 OR10G6Q8NH81 332 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 C16orf78Q8WTQ4 265 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 KLHL6Q8WZ60 621 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 MTERF3Q96E29 417 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 MED8Q96G25 268 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 AIF1LQ9BQI0 150 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 MRPS30Q9NP92 439 aaKnown RBP7.24□□□□□ -1.25
CDKL5-202ENST00000379996 TMEM9BQ9NQ34 198 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 TAC3Q9UHF0 121 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 POFUT2Q9Y2G5 429 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 PCDHGA1Q9Y5H4 931 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 TLCD2A6NGC4 264 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 RHPN2P1A8MT19 583 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 EFCAB9A8MZ26 197 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 ADAMDEC1O15204 470 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 SUV39H1O43463 412 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 DUX1O43812 170 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 CLEC3AO75596 197 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 RPLP1P05386 114 aaKnown RBP7.24□□□□□ -1.25
CDKL5-202ENST00000379996 ANXA4P09525 319 aaPredicted RBP7.24□□□□□ -1.25
CDKL5-202ENST00000379996 ALOX5P09917 674 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 EPHA1P21709 976 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 CD1CP29017 333 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 GABRA4P48169 554 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 MC1RQ01726 317 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 FCRL6Q6DN72 434 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 MED27Q6P2C8 311 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 C11orf65Q8NCR3 313 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 GPR32P1Q8NGA4 272 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 OR4D9Q8NGE8 314 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 ATOH1Q92858 354 aaPredicted RBP7.24□□□□□ -1.25
CDKL5-202ENST00000379996 ZDHHC12Q96GR4 267 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 SLC38A3Q99624 504 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 CDC6Q99741 560 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms