RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 ACMSDQ8TDX5 336 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 DCAKDQ8WVC6 231 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 CCDC126Q96EE4 140 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 ZNF681Q96N22 645 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 SFXN2Q96NB2 322 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 NODALQ96S42 347 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 RBM24Q9BX46 236 aaKnown RBP13.43□□□□□ -0.26
HDAC6-204ENST00000376643 EPB41L4BQ9H329 900 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 SERHLQ9NQF3 203 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 SDHAF3Q9NRP4 125 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 FARSBQ9NSD9 589 aaKnown RBP13.43□□□□□ -0.26
HDAC6-204ENST00000376643 JKAMPQ9P055 326 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 NDRG3Q9UGV2 375 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 DKKL1Q9UK85 242 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 MAPRE3Q9UPY8 281 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 DTX4Q9Y2E6 619 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 DLGAP4Q9Y2H0 992 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 WBP11Q9Y2W2 641 aaKnown RBP13.43□□□□□ -0.26
HDAC6-204ENST00000376643 OR10H1Q9Y4A9 318 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 AKAP9Q99996 3911 aa13.43□□□□□ -0.26
HDAC6-204ENST00000376643 CASKO14936 926 aa13.42□□□□□ -0.26
HDAC6-204ENST00000376643 OR4F21O95013 312 aa13.42□□□□□ -0.26
HDAC6-204ENST00000376643 GSTA1P08263 222 aa13.42□□□□□ -0.26
HDAC6-204ENST00000376643 PCSK2P16519 638 aa13.42□□□□□ -0.26
HDAC6-204ENST00000376643 IMPDH1P20839 514 aa13.42□□□□□ -0.26
HDAC6-204ENST00000376643 PCYT1AP49585 367 aa13.42□□□□□ -0.26
HDAC6-204ENST00000376643 CLK3P49761 638 aaKnown RBP13.42□□□□□ -0.26
HDAC6-204ENST00000376643 PSMD4P55036 377 aaKnown RBP13.42□□□□□ -0.26
HDAC6-204ENST00000376643 LCP2Q13094 533 aa13.42□□□□□ -0.26
HDAC6-204ENST00000376643 FGFBP1Q14512 234 aa13.42□□□□□ -0.26
HDAC6-204ENST00000376643 GANABQ14697 944 aaKnown RBP13.42□□□□□ -0.26
HDAC6-204ENST00000376643 BCL2A1Q16548 175 aa13.42□□□□□ -0.26
HDAC6-204ENST00000376643 TRMT12Q53H54 448 aaKnown RBP13.42□□□□□ -0.26
HDAC6-204ENST00000376643 ZNF628Q5EBL2 1059 aa13.42□□□□□ -0.26
HDAC6-204ENST00000376643 ZNF678Q5SXM1 525 aa13.42□□□□□ -0.26
HDAC6-204ENST00000376643 TRMT10CQ7L0Y3 403 aaKnown RBP13.42□□□□□ -0.26
HDAC6-204ENST00000376643 GRAMD2AQ8IUY3 354 aa13.42□□□□□ -0.26
HDAC6-204ENST00000376643 TMBIM1Q969X1 311 aa13.42□□□□□ -0.26
HDAC6-204ENST00000376643 IQCGQ9H095 443 aaKnown RBP13.42□□□□□ -0.26
HDAC6-204ENST00000376643 GALNT9Q9HCQ5 603 aa13.42□□□□□ -0.26
HDAC6-204ENST00000376643 SLC35C2Q9NQQ7 365 aa13.42□□□□□ -0.26
HDAC6-204ENST00000376643 PLEKHA6Q9Y2H5 1048 aa13.42□□□□□ -0.26
HDAC6-204ENST00000376643 MTORP42345 2549 aa13.41□□□□□ -0.26
HDAC6-204ENST00000376643 TTC36A6NLP5 189 aa13.41□□□□□ -0.26
HDAC6-204ENST00000376643 CLCA1A8K7I4 914 aa13.41□□□□□ -0.26
HDAC6-204ENST00000376643 PLOD3O60568 738 aa13.41□□□□□ -0.26
HDAC6-204ENST00000376643 IL3P08700 152 aa13.41□□□□□ -0.26
HDAC6-204ENST00000376643 KLK2P20151 261 aa13.41□□□□□ -0.26
HDAC6-204ENST00000376643 TIA1P31483 386 aaKnown RBP eCLIP13.41□□□□□ -0.26
HDAC6-204ENST00000376643 PTGDSP41222 190 aa13.41□□□□□ -0.26
HDAC6-204ENST00000376643 MRPS35P82673 323 aaKnown RBP13.41□□□□□ -0.26
HDAC6-204ENST00000376643 ZNHIT3Q15649 155 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-204ENST00000376643 DCST1Q5T197 706 aa13.41□□□□□ -0.26
HDAC6-204ENST00000376643 GALNT18Q6P9A2 607 aa13.41□□□□□ -0.26
HDAC6-204ENST00000376643 POMZP3Q6PJE2 187 aa13.41□□□□□ -0.26
HDAC6-204ENST00000376643 LARP4Q71RC2 724 aaKnown RBP eCLIP13.41□□□□□ -0.26
HDAC6-204ENST00000376643 P4HA3Q7Z4N8 544 aa13.41□□□□□ -0.26
HDAC6-204ENST00000376643 TRIM42Q8IWZ5 723 aa13.41□□□□□ -0.26
HDAC6-204ENST00000376643 CCDC116Q8IYX3 515 aa13.41□□□□□ -0.26
HDAC6-204ENST00000376643 C9orf106Q8NAJ2 232 aa13.41□□□□□ -0.26
HDAC6-204ENST00000376643 OR4K17Q8NGC6 315 aa13.41□□□□□ -0.26
HDAC6-204ENST00000376643 SMPDL3BQ92485 455 aa13.41□□□□□ -0.26
HDAC6-204ENST00000376643 NRGNQ92686 78 aa13.41□□□□□ -0.26
HDAC6-204ENST00000376643 C16orf45Q96MC5 204 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-204ENST00000376643 BBS4Q96RK4 519 aa13.41□□□□□ -0.26
HDAC6-204ENST00000376643 ADOQ96SZ5 270 aa13.41□□□□□ -0.26
HDAC6-204ENST00000376643 TUBA1CQ9BQE3 449 aa13.41□□□□□ -0.26
HDAC6-204ENST00000376643 PTGES2Q9H7Z7 377 aa13.41□□□□□ -0.26
HDAC6-204ENST00000376643 MIEF1Q9NQG6 463 aa13.41□□□□□ -0.26
HDAC6-204ENST00000376643 STOML1Q9UBI4 398 aa13.41□□□□□ -0.26
HDAC6-204ENST00000376643 PACSIN3Q9UKS6 424 aa13.41□□□□□ -0.26
HDAC6-204ENST00000376643 GRID1Q9ULK0 1009 aa13.41□□□□□ -0.26
HDAC6-204ENST00000376643 ABCG2Q9UNQ0 655 aa13.41□□□□□ -0.26
HDAC6-204ENST00000376643 EIF3LQ9Y262 564 aaKnown RBP13.41□□□□□ -0.26
HDAC6-204ENST00000376643 A0A087WV62 115 aa13.4□□□□□ -0.26
HDAC6-204ENST00000376643 SERTM1A2A2V5 107 aa13.4□□□□□ -0.26
HDAC6-204ENST00000376643 KIF2AO00139 706 aaPredicted RBP13.4□□□□□ -0.26
HDAC6-204ENST00000376643 PEPDP12955 493 aa13.4□□□□□ -0.26
HDAC6-204ENST00000376643 GRK2P25098 689 aa13.4□□□□□ -0.26
HDAC6-204ENST00000376643 NTSP30990 170 aa13.4□□□□□ -0.26
HDAC6-204ENST00000376643 PRKAA2P54646 552 aa13.4□□□□□ -0.26
HDAC6-204ENST00000376643 GFRA1P56159 465 aa13.4□□□□□ -0.26
HDAC6-204ENST00000376643 DSCR4P56555 118 aaPredicted RBP13.4□□□□□ -0.26
HDAC6-204ENST00000376643 WNT3P56703 355 aa13.4□□□□□ -0.26
HDAC6-204ENST00000376643 SRYQ05066 204 aa13.4□□□□□ -0.26
HDAC6-204ENST00000376643 ZNF763Q0D2J5 394 aa13.4□□□□□ -0.26
HDAC6-204ENST00000376643 SNTB1Q13884 538 aaKnown RBP13.4□□□□□ -0.26
HDAC6-204ENST00000376643 LTB4RQ15722 352 aa13.4□□□□□ -0.26
HDAC6-204ENST00000376643 CYP27C1Q4G0S4 372 aa13.4□□□□□ -0.26
HDAC6-204ENST00000376643 ADGRE4PQ86SQ3 457 aa13.4□□□□□ -0.26
HDAC6-204ENST00000376643 C17orf53Q8N3J3 647 aaPredicted RBP13.4□□□□□ -0.26
HDAC6-204ENST00000376643 MEIOBQ8N635 442 aa13.4□□□□□ -0.26
HDAC6-204ENST00000376643 WDSUB1Q8N9V3 476 aa13.4□□□□□ -0.26
HDAC6-204ENST00000376643 OR9A2Q8NGT5 310 aa13.4□□□□□ -0.26
HDAC6-204ENST00000376643 FAM76AQ8TAV0 307 aa13.4□□□□□ -0.26
HDAC6-204ENST00000376643 RDH11Q8TC12 318 aa13.4□□□□□ -0.26
HDAC6-204ENST00000376643 EXOSC8Q96B26 276 aaKnown RBP13.4□□□□□ -0.26
HDAC6-204ENST00000376643 L3HYPDHQ96EM0 354 aa13.4□□□□□ -0.26
HDAC6-204ENST00000376643 VSTM2LQ96N03 204 aa13.4□□□□□ -0.26
HDAC6-204ENST00000376643 ACPTQ9BZG2 426 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms