RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 SLC38A1Q9H2H9 487 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 APMAPQ9HDC9 416 aa12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 CEP170BQ9Y4F5 1589 aaPredicted RBP12.61□□□□□ -0.39
SRGAP3-201ENST00000360413 UPK3BL1B0FP48 263 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 UPK3BL2E5RIL1 263 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 ZNF783Q6ZMS7 281 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 IL22RA1Q8N6P7 574 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 RXFP3Q9NSD7 469 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 IL20RAQ9UHF4 553 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 HSPE1-MOB4S4R3N1 261 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 UQCRC2P22695 453 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 VIPR1P32241 457 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 SLC18B1Q6NT16 456 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 TPRA1Q86W33 373 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 ACOT11Q8WXI4 607 aaPredicted RBP12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 KIAA1191Q96A73 305 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 SERTAD4Q9NUC0 356 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 GALPQ9UBC7 116 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 ASB4Q9Y574 426 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 A0A1W2PS29 197 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 GGT3PA6NGU5 568 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 TXNDC12O95881 172 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 NKX3-2P78367 333 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 DPY19L2P1Q6NXN4 242 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 BBS10Q8TAM1 723 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 SNX27Q96L92 541 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 TRIB3Q96RU7 358 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 CYTIPO60759 359 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 C6orf47O95873 294 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 POU6F2P78424 691 aaPredicted RBP12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 GPR137CQ8N3F9 429 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 PGAM5Q96HS1 289 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 IL21RQ9HBE5 538 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 FAAHO00519 579 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 BEST1O76090 585 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 OLFM2O95897 454 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 APOA2P02652 100 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 MAT2AP31153 395 aaKnown RBP12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 SH3YL1Q96HL8 342 aaPredicted RBP12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 CDC6Q99741 560 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 DOHHQ9BU89 302 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 CRB3Q9BUF7 120 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 SARDHQ9UL12 918 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 A6NCN8 305 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 B4GALT5O43286 388 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 PRAF2O60831 178 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 EPOP01588 193 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 GPR19Q15760 415 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 TSPEARQ8WU66 669 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 MAL2Q969L2 176 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 SLC38A8A6NNN8 435 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 AOC2O75106 756 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 CNOT4O95628 575 aaKnown RBP12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 DPY19L4Q7Z388 723 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 DPF1Q92782 380 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 ZNF442Q9H7R0 627 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 SAGE1Q9NXZ1 904 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 ENPP5Q9UJA9 477 aa12.6□□□□□ -0.39
SRGAP3-201ENST00000360413 COL5A2P05997 1499 aaPredicted RBP12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 SLC22A31A6NKX4 558 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 C2CD4BA6NLJ0 364 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 TNFRSF10AO00220 468 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 MMP2P08253 660 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 CLCNKAP51800 687 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 NR0B1P51843 470 aaKnown RBP12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 NIT2Q9NQR4 276 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 UBR1Q8IWV7 1749 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 TNS2Q63HR2 1409 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 ADAMTS4O75173 837 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 PBX2P40425 430 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 NAA10P41227 235 aaPredicted RBP12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 KCNJ11Q14654 390 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 ZNF679Q8IYX0 411 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 ADAMTS19Q8TE59 1207 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 DDNO94850 711 aaPredicted RBP12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 ADRB3P13945 408 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 SPOCK1Q08629 439 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 UGT3A2Q3SY77 523 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 SIMC1Q8NDZ2 872 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 LRR1Q96L50 414 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 FGFBP2Q9BYJ0 223 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 B3GNT2Q9NY97 397 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 CLEC4EQ9ULY5 219 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 UNC13CQ8NB66 2214 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 P04436 131 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 CBLP22681 906 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 PYCR1P32322 319 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 TATDN3Q17R31 274 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 PLEKHS1Q5SXH7 462 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 AGAP6Q5VW22 663 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 THOC6Q86W42 341 aaKnown RBP12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 NIPA2Q8N8Q9 360 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 NTAN1Q96AB6 310 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 AGAP4Q96P64 663 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 IKZF4Q9H2S9 585 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 ZNF230Q9UIE0 474 aaPredicted RBP12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 PADI3Q9ULW8 664 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 HLA-EP13747 358 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 FLT3LGP49771 235 aa12.59□□□□□ -0.39
SRGAP3-201ENST00000360413 ATG9BQ674R7 924 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms