RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 ZNF404Q494X3 552 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 C1orf189Q5VU69 101 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 GALNT12Q8IXK2 581 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 AVL9Q8NBF6 648 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 OR51A7Q8NH64 312 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 SLC37A2Q8TED4 501 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 ZNF566Q969W8 418 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 C1GALT1C1Q96EU7 318 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 CNDP2Q96KP4 475 aaKnown RBP9.78□□□□□ -0.84
SMPD4-201ENST00000351288 CDCA3Q99618 268 aaPredicted RBP9.78□□□□□ -0.84
SMPD4-201ENST00000351288 SPATA5L1Q9BVQ7 753 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 CLEC4AQ9UMR7 237 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 HEBP2Q9Y5Z4 205 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 ZNF106Q9H2Y7 1883 aaKnown RBP9.78□□□□□ -0.84
SMPD4-201ENST00000351288 DMDP11532 3685 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 MYL12AP19105 171 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 SLC9A3P48764 834 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 FADDQ13158 208 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 TAB1Q15750 504 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 STEAP3Q658P3 488 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 FCRLBQ6BAA4 426 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 RNF165Q6ZSG1 346 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 PRSS41Q7RTY9 318 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 DEPDC4Q8N2C3 294 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 SLC44A3Q8N4M1 653 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 CAMKVQ8NCB2 501 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 SIMC1Q8NDZ2 872 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 MYDGFQ969H8 173 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 ELSPBP1Q96BH3 223 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 OR8D2Q9GZM6 311 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 NUAK2Q9H093 628 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 IFT52Q9Y366 437 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 KCNE3Q9Y6H6 103 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 LRIT2A6NDA9 550 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 NPIPB8E9PQR5 432 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 TSPAN19P0C672 248 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 PAICSP22234 425 aaKnown RBP9.78□□□□□ -0.84
SMPD4-201ENST00000351288 FCARP24071 287 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 ATP5A1P25705 553 aaKnown RBP9.78□□□□□ -0.84
SMPD4-201ENST00000351288 CAV3P56539 151 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 RUNX1T1Q06455 604 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 NFATC4Q14934 902 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 OXA1LQ15070 435 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 ZMAT1Q5H9K5 638 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 NKAIN2Q5VXU1 208 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 RTL10Q7L3V2 364 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 PEX5LQ8IYB4 626 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 SLC16A11Q8NCK7 471 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 OR2L5Q8NG80 312 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 HSPA12BQ96MM6 686 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 MGLLQ99685 303 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 MCHR1Q99705 422 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 C1QTNF2Q9BXJ5 285 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 SERHL2Q9H4I8 314 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 NECTIN3Q9NQS3 549 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 KLHL1Q9NR64 748 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 SNTG1Q9NSN8 517 aa9.78□□□□□ -0.84
SMPD4-201ENST00000351288 PRAMEF27A3QJZ7 478 aa9.77□□□□□ -0.84
SMPD4-201ENST00000351288 C5orf67F2Z3F1 127 aa9.77□□□□□ -0.84
SMPD4-201ENST00000351288 H0YGG7 62 aa9.77□□□□□ -0.84
SMPD4-201ENST00000351288 FOXE1O00358 373 aaPredicted RBP9.77□□□□□ -0.84
SMPD4-201ENST00000351288 KHNYNO15037 678 aaKnown RBP9.77□□□□□ -0.84
SMPD4-201ENST00000351288 CFIP05156 583 aa9.77□□□□□ -0.84
SMPD4-201ENST00000351288 PORP16435 677 aaPredicted RBP9.77□□□□□ -0.84
SMPD4-201ENST00000351288 DRD1P21728 446 aa9.77□□□□□ -0.84
SMPD4-201ENST00000351288 ACVR2AP27037 513 aa9.77□□□□□ -0.84
SMPD4-201ENST00000351288 RGS6P49758 472 aa9.77□□□□□ -0.84
SMPD4-201ENST00000351288 ARF3P61204 181 aaPredicted RBP9.77□□□□□ -0.84
SMPD4-201ENST00000351288 GINS1Q14691 196 aa9.77□□□□□ -0.84
SMPD4-201ENST00000351288 ZNHIT3Q15649 155 aaPredicted RBP9.77□□□□□ -0.84
SMPD4-201ENST00000351288 LIPKQ5VXJ0 399 aa9.77□□□□□ -0.84
SMPD4-201ENST00000351288 ZNF793Q6ZN11 406 aa9.77□□□□□ -0.84
SMPD4-201ENST00000351288 CDK20Q8IZL9 346 aa9.77□□□□□ -0.84
SMPD4-201ENST00000351288 DTX3Q8N9I9 347 aa9.77□□□□□ -0.84
SMPD4-201ENST00000351288 OR4K5Q8NGD3 323 aa9.77□□□□□ -0.84
SMPD4-201ENST00000351288 CDS1Q92903 461 aa9.77□□□□□ -0.84
SMPD4-201ENST00000351288 WDR12Q9GZL7 423 aaKnown RBP9.77□□□□□ -0.84
SMPD4-201ENST00000351288 POFUT2Q9Y2G5 429 aa9.77□□□□□ -0.84
SMPD4-201ENST00000351288 ENPP4Q9Y6X5 453 aa9.77□□□□□ -0.84
SMPD4-201ENST00000351288 TLR4O00206 839 aa9.77□□□□□ -0.85
SMPD4-201ENST00000351288 BMP7P18075 431 aa9.77□□□□□ -0.85
SMPD4-201ENST00000351288 NDUFS1P28331 727 aa9.77□□□□□ -0.85
SMPD4-201ENST00000351288 XCR1P46094 333 aa9.77□□□□□ -0.85
SMPD4-201ENST00000351288 TMED10P49755 219 aaKnown RBP9.77□□□□□ -0.85
SMPD4-201ENST00000351288 DUSP2Q05923 314 aa9.77□□□□□ -0.85
SMPD4-201ENST00000351288 C1DQ13901 141 aaKnown RBP9.77□□□□□ -0.85
SMPD4-201ENST00000351288 LARS2Q15031 903 aaKnown RBP9.77□□□□□ -0.85
SMPD4-201ENST00000351288 FRMPD2BQ6IN97 320 aa9.77□□□□□ -0.85
SMPD4-201ENST00000351288 TCTN3Q6NUS6 607 aa9.77□□□□□ -0.85
SMPD4-201ENST00000351288 NIPAL1Q6NVV3 410 aa9.77□□□□□ -0.85
SMPD4-201ENST00000351288 MSANTD1Q6ZTZ1 278 aa9.77□□□□□ -0.85
SMPD4-201ENST00000351288 NLRP8Q86W28 1048 aa9.77□□□□□ -0.85
SMPD4-201ENST00000351288 LRRC56Q8IYG6 542 aaPredicted RBP9.77□□□□□ -0.85
SMPD4-201ENST00000351288 GPR135Q8IZ08 494 aa9.77□□□□□ -0.85
SMPD4-201ENST00000351288 OR4C15Q8NGM1 316 aa9.77□□□□□ -0.85
SMPD4-201ENST00000351288 SLC7A13Q8TCU3 470 aa9.77□□□□□ -0.85
SMPD4-201ENST00000351288 TRMT61AQ96FX7 289 aaKnown RBP9.77□□□□□ -0.85
SMPD4-201ENST00000351288 CDADC1Q9BWV3 514 aa9.77□□□□□ -0.85
SMPD4-201ENST00000351288 UCK2Q9BZX2 261 aa9.77□□□□□ -0.85
SMPD4-201ENST00000351288 EPHX3Q9H6B9 360 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms