RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 DNAJB12Q9NXW2 375 aaKnown RBP12.16□□□□□ -0.46
NUDCD3-201ENST00000338427 PCDHGB3Q9Y5G1 929 aa12.16□□□□□ -0.46
NUDCD3-201ENST00000338427 AKAP6Q13023 2319 aa12.16□□□□□ -0.46
NUDCD3-201ENST00000338427 MYO1GB0I1T2 1018 aa12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 ACOX3O15254 700 aa12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 ZIC3O60481 467 aa12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 PLIN3O60664 434 aa12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 ERN1O75460 977 aaKnown RBP12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 CTAG2O75638 210 aa12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 CBR3O75828 277 aa12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 ZWINTO95229 277 aa12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 IL2RAP01589 272 aa12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 ENO1P06733 434 aaKnown RBP12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 TACR1P25103 407 aa12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 DNAJA1P31689 397 aaKnown RBP12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 TIMP3P35625 211 aa12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 GAS1P54826 345 aa12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 DCAF7P61962 342 aa12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 GAB1Q13480 694 aa12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 SPIN4Q56A73 249 aa12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 NHSL2Q5HYW2 709 aa12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 NSUN5P2Q63ZY6 315 aa12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 CLEC6AQ6EIG7 209 aa12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 FAM71E1Q6IPT2 247 aa12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 ANKRD26P1Q6NSI1 321 aa12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 GALNT18Q6P9A2 607 aa12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 LARP4Q71RC2 724 aaKnown RBP eCLIP12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 PLCZ1Q86YW0 608 aa12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 C4orf33Q8N1A6 199 aa12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 OR14L1PQ8NHC6 308 aa12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 EPS8L3Q8TE67 593 aaKnown RBP12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 UBLCP1Q8WVY7 318 aaPredicted RBP12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 GFM2Q969S9 779 aaKnown RBP12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 SH3GL2Q99962 352 aa12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 G6PC3Q9BUM1 346 aa12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 GLIPR2Q9H4G4 154 aa12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 RPH3AQ9Y2J0 694 aaPredicted RBP12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 CCL27Q9Y4X3 112 aa12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 MED13LQ71F56 2210 aa12.15□□□□□ -0.46
NUDCD3-201ENST00000338427 SERTM1A2A2V5 107 aa12.14□□□□□ -0.47
NUDCD3-201ENST00000338427 OR6C70A6NIJ9 312 aa12.14□□□□□ -0.47
NUDCD3-201ENST00000338427 KIF2AO00139 706 aaPredicted RBP12.14□□□□□ -0.47
NUDCD3-201ENST00000338427 PLOD3O60568 738 aa12.14□□□□□ -0.47
NUDCD3-201ENST00000338427 CYP4B1P13584 511 aa12.14□□□□□ -0.47
NUDCD3-201ENST00000338427 CPA3P15088 417 aa12.14□□□□□ -0.47
NUDCD3-201ENST00000338427 DDCP20711 480 aa12.14□□□□□ -0.47
NUDCD3-201ENST00000338427 MC3RP41968 323 aa12.14□□□□□ -0.47
NUDCD3-201ENST00000338427 NCBP2P52298 156 aaKnown RBP eCLIP12.14□□□□□ -0.47
NUDCD3-201ENST00000338427 IST1P53990 364 aa12.14□□□□□ -0.47
NUDCD3-201ENST00000338427 PSG6Q00889 435 aa12.14□□□□□ -0.47
NUDCD3-201ENST00000338427 HEPACAMQ14CZ8 416 aa12.14□□□□□ -0.47
NUDCD3-201ENST00000338427 CEBPEQ15744 281 aa12.14□□□□□ -0.47
NUDCD3-201ENST00000338427 TMEM81Q6P7N7 255 aa12.14□□□□□ -0.47
NUDCD3-201ENST00000338427 TMEM107Q6UX40 140 aa12.14□□□□□ -0.47
NUDCD3-201ENST00000338427 LCA5Q86VQ0 697 aa12.14□□□□□ -0.47
NUDCD3-201ENST00000338427 LACC1Q8IV20 430 aa12.14□□□□□ -0.47
NUDCD3-201ENST00000338427 OR5M1Q8NGP8 315 aa12.14□□□□□ -0.47
NUDCD3-201ENST00000338427 OR2W6PQ8NHA6 318 aa12.14□□□□□ -0.47
NUDCD3-201ENST00000338427 RNASE6Q93091 150 aaKnown RBP12.14□□□□□ -0.47
NUDCD3-201ENST00000338427 TMCO6Q96DC7 493 aa12.14□□□□□ -0.47
NUDCD3-201ENST00000338427 SLC35A4Q96G79 324 aa12.14□□□□□ -0.47
NUDCD3-201ENST00000338427 BTBD9Q96Q07 612 aa12.14□□□□□ -0.47
NUDCD3-201ENST00000338427 OR2B2Q9GZK3 357 aa12.14□□□□□ -0.47
NUDCD3-201ENST00000338427 DSN1Q9H410 356 aa12.14□□□□□ -0.47
NUDCD3-201ENST00000338427 SIRT5Q9NXA8 310 aa12.14□□□□□ -0.47
NUDCD3-201ENST00000338427 TAS2R10Q9NYW0 307 aa12.14□□□□□ -0.47
NUDCD3-201ENST00000338427 MED11Q9P086 117 aa12.14□□□□□ -0.47
NUDCD3-201ENST00000338427 FETUBQ9UGM5 382 aa12.14□□□□□ -0.47
NUDCD3-201ENST00000338427 FIS1Q9Y3D6 152 aa12.14□□□□□ -0.47
NUDCD3-201ENST00000338427 DOCK7Q96N67 2140 aa12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 TLDC2A0PJX2 215 aa12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 GXYLT2A0PJZ3 443 aa12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 CD8B2A6NJW9 211 aa12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 H0YC42 278 aa12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 UPK1AO00322 258 aa12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 DVL2O14641 736 aa12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 SCO2O43819 266 aa12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 GLRA3O75311 464 aa12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 SEC22BO75396 215 aa12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 BCAS2O75934 225 aaPredicted RBP12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 CTSSP25774 331 aa12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 MPIP34949 423 aa12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 CRHR1P34998 444 aa12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 ART1P52961 327 aa12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 TPD52P55327 224 aaPredicted RBP12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 GFRA1P56159 465 aa12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 SNTA1Q13424 505 aa12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 KIAA0040Q15053 153 aa12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 IMPG1Q17R60 797 aa12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 ERCC6LQ2NKX8 1250 aa12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 NOXRED1Q6NXP6 359 aa12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 Q6ZSR9 355 aa12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 ZNF551Q7Z340 670 aaPredicted RBP12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 TRIM46Q7Z4K8 759 aa12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 C10orf107Q8IVU9 208 aa12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 PM20D2Q8IYS1 436 aa12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 FAM9CQ8IZT9 166 aa12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 CCDC63Q8NA47 563 aa12.13□□□□□ -0.47
NUDCD3-201ENST00000338427 ZPLD1Q8TCW7 415 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms